data_6QNA
#
_model_server_result.job_id            TnX1nx_6yiUo8diK-UrV9A 
_model_server_result.datetime_utc      '2024-10-20 00:37:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qna 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":301}' 
#
_entry.id    6QNA 
#
_exptl.entry_id    6QNA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         89.66 
_cell.angle_beta          87.35 
_cell.angle_gamma         88.6 
_cell.entry_id            6QNA 
_cell.length_a            43.44 
_cell.length_b            76.27 
_cell.length_c            130.03 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QNA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,J,K 1 1 
C,D,I,L,M 2 1 
E,F,N,O 3 1 
G,H,P,Q 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 95 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 A SG CYS 100 H CYS 100 1_555 A SG CYS 110 H CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 A SG CYS 147 H CYS 147 1_555 A SG CYS 235 H CYS 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf4 A SG CYS 148 H CYS 148 1_555 B SG CYS 213 L CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 A SG CYS 160 H CYS 160 1_555 A SG CYS 216 H CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf6 B SG CYS 22 L CYS 22 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf7 B SG CYS 136 L CYS 136 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf8 C SG CYS 22 A CYS 22 1_555 C SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf9 C SG CYS 100 A CYS 100 1_555 C SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf10 C SG CYS 147 A CYS 147 1_555 C SG CYS 235 A CYS 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf11 C SG CYS 148 A CYS 148 1_555 D SG CYS 213 B CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf12 C SG CYS 160 A CYS 160 1_555 C SG CYS 216 A CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 D SG CYS 22 B CYS 22 1_555 D SG CYS 89 B CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf14 D SG CYS 136 B CYS 136 1_555 D SG CYS 195 B CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf15 E SG CYS 22 C CYS 22 1_555 E SG CYS 95 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf16 E SG CYS 100 C CYS 100 1_555 E SG CYS 110 C CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf17 E SG CYS 147 C CYS 147 1_555 E SG CYS 235 C CYS 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf18 E SG CYS 148 C CYS 148 1_555 F SG CYS 213 D CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf19 E SG CYS 160 C CYS 160 1_555 E SG CYS 216 C CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf20 F SG CYS 22 D CYS 22 1_555 F SG CYS 89 D CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf21 F SG CYS 136 D CYS 136 1_555 F SG CYS 195 D CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf22 G SG CYS 22 E CYS 22 1_555 G SG CYS 95 E CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf23 G SG CYS 100 E CYS 100 1_555 G SG CYS 110 E CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf24 G SG CYS 147 E CYS 147 1_555 G SG CYS 235 E CYS 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf25 G SG CYS 148 E CYS 148 1_555 H SG CYS 213 F CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf26 G SG CYS 160 E CYS 160 1_555 G SG CYS 216 E CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf27 H SG CYS 22 F CYS 22 1_555 H SG CYS 89 F CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf28 H SG CYS 136 F CYS 136 1_555 H SG CYS 195 F CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6QNA 
_atom_sites.fract_transf_matrix[1][1]    0.02302 
_atom_sites.fract_transf_matrix[1][2]    -0.000563 
_atom_sites.fract_transf_matrix[1][3]    -0.001063 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013115 
_atom_sites.fract_transf_matrix[2][3]    -0.000063 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007699 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 GOL B 1 301 301 GOL GOL . 
J 4 HOH H 1 301 20 HOH HOH . 
J 4 HOH H 2 302 50 HOH HOH . 
J 4 HOH H 3 303 24 HOH HOH . 
J 4 HOH H 4 304 32 HOH HOH . 
J 4 HOH H 5 305 23 HOH HOH . 
J 4 HOH H 6 306 5 HOH HOH . 
J 4 HOH H 7 307 3 HOH HOH . 
J 4 HOH H 8 308 11 HOH HOH . 
J 4 HOH H 9 309 7 HOH HOH . 
J 4 HOH H 10 310 31 HOH HOH . 
J 4 HOH H 11 311 29 HOH HOH . 
K 4 HOH L 1 301 25 HOH HOH . 
K 4 HOH L 2 302 13 HOH HOH . 
K 4 HOH L 3 303 15 HOH HOH . 
K 4 HOH L 4 304 22 HOH HOH . 
K 4 HOH L 5 305 21 HOH HOH . 
K 4 HOH L 6 306 47 HOH HOH . 
K 4 HOH L 7 307 46 HOH HOH . 
K 4 HOH L 8 308 44 HOH HOH . 
K 4 HOH L 9 309 40 HOH HOH . 
L 4 HOH A 1 301 19 HOH HOH . 
L 4 HOH A 2 302 43 HOH HOH . 
L 4 HOH A 3 303 8 HOH HOH . 
L 4 HOH A 4 304 36 HOH HOH . 
L 4 HOH A 5 305 51 HOH HOH . 
L 4 HOH A 6 306 16 HOH HOH . 
L 4 HOH A 7 307 17 HOH HOH . 
M 4 HOH B 1 401 38 HOH HOH . 
M 4 HOH B 2 402 45 HOH HOH . 
N 4 HOH C 1 301 18 HOH HOH . 
N 4 HOH C 2 302 2 HOH HOH . 
N 4 HOH C 3 303 39 HOH HOH . 
N 4 HOH C 4 304 1 HOH HOH . 
N 4 HOH C 5 305 4 HOH HOH . 
N 4 HOH C 6 306 41 HOH HOH . 
O 4 HOH D 1 301 6 HOH HOH . 
O 4 HOH D 2 302 49 HOH HOH . 
O 4 HOH D 3 303 48 HOH HOH . 
O 4 HOH D 4 304 27 HOH HOH . 
O 4 HOH D 5 305 26 HOH HOH . 
P 4 HOH E 1 301 28 HOH HOH . 
P 4 HOH E 2 302 37 HOH HOH . 
P 4 HOH E 3 303 30 HOH HOH . 
P 4 HOH E 4 304 14 HOH HOH . 
P 4 HOH E 5 305 42 HOH HOH . 
Q 4 HOH F 1 301 10 HOH HOH . 
Q 4 HOH F 2 302 33 HOH HOH . 
Q 4 HOH F 3 303 35 HOH HOH . 
Q 4 HOH F 4 304 12 HOH HOH . 
Q 4 HOH F 5 305 34 HOH HOH . 
Q 4 HOH F 6 306 9 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 3 -14.823 -5.785 -24.171 1 108.92 ? C1 GOL 301 B 1 
HETATM 2 O O1 GOL . . . I 3 -13.583 -5.56 -23.578 1 109.22 ? O1 GOL 301 B 1 
HETATM 3 C C2 GOL . . . I 3 -15.071 -7.314 -24.165 1 109.26 ? C2 GOL 301 B 1 
HETATM 4 O O2 GOL . . . I 3 -14.831 -7.874 -22.92 1 107.24 ? O2 GOL 301 B 1 
HETATM 5 C C3 GOL . . . I 3 -16.542 -7.482 -24.613 1 109.77 ? C3 GOL 301 B 1 
HETATM 6 O O3 GOL . . . I 3 -16.512 -7.867 -25.954 1 108.74 ? O3 GOL 301 B 1 
#
_model_server_stats.io_time_ms              123 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#