data_6QNJ # _model_server_result.job_id Ky-accGUj7acmFXKEDsdAg _model_server_result.datetime_utc '2024-10-14 00:27:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qnj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6QNJ # _exptl.entry_id 6QNJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QNJ _cell.length_a 94.62 _cell.length_b 99.38 _cell.length_c 87.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QNJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 181 A GLU 181 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc2 A OE1 GLU 217 A GLU 217 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc3 A OE2 GLU 217 A GLU 217 1_555 D CO CO . A CO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc4 A NE2 HIS 220 A HIS 220 1_555 D CO CO . A CO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc5 A OD2 ASP 245 A ASP 245 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc6 A OD1 ASP 255 A ASP 255 1_555 D CO CO . A CO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc7 A OD2 ASP 255 A ASP 255 1_555 D CO CO . A CO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc8 A OD1 ASP 257 A ASP 257 1_555 D CO CO . A CO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc9 A OD2 ASP 287 A ASP 287 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc10 B MG MG . A MG 401 1_555 C O4 GLC . A GLC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc11 B MG MG . A MG 401 1_555 C O3 GLC . A GLC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc12 D CO CO . A CO 403 1_555 E O HOH . A HOH 586 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6QNJ _atom_sites.fract_transf_matrix[1][1] 0.010569 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 401 2 MG MG . C 3 GLC A 1 402 1 GLC GLC . D 4 CO A 1 403 2 CO CO . E 5 HOH A 1 501 187 HOH HOH . E 5 HOH A 2 502 161 HOH HOH . E 5 HOH A 3 503 141 HOH HOH . E 5 HOH A 4 504 271 HOH HOH . E 5 HOH A 5 505 200 HOH HOH . E 5 HOH A 6 506 220 HOH HOH . E 5 HOH A 7 507 147 HOH HOH . E 5 HOH A 8 508 268 HOH HOH . E 5 HOH A 9 509 160 HOH HOH . E 5 HOH A 10 510 90 HOH HOH . E 5 HOH A 11 511 144 HOH HOH . E 5 HOH A 12 512 261 HOH HOH . E 5 HOH A 13 513 237 HOH HOH . E 5 HOH A 14 514 84 HOH HOH . E 5 HOH A 15 515 98 HOH HOH . E 5 HOH A 16 516 229 HOH HOH . E 5 HOH A 17 517 131 HOH HOH . E 5 HOH A 18 518 64 HOH HOH . E 5 HOH A 19 519 179 HOH HOH . E 5 HOH A 20 520 168 HOH HOH . E 5 HOH A 21 521 208 HOH HOH . E 5 HOH A 22 522 47 HOH HOH . E 5 HOH A 23 523 34 HOH HOH . E 5 HOH A 24 524 178 HOH HOH . E 5 HOH A 25 525 113 HOH HOH . E 5 HOH A 26 526 224 HOH HOH . E 5 HOH A 27 527 201 HOH HOH . E 5 HOH A 28 528 70 HOH HOH . E 5 HOH A 29 529 148 HOH HOH . E 5 HOH A 30 530 59 HOH HOH . E 5 HOH A 31 531 269 HOH HOH . E 5 HOH A 32 532 176 HOH HOH . E 5 HOH A 33 533 254 HOH HOH . E 5 HOH A 34 534 188 HOH HOH . E 5 HOH A 35 535 243 HOH HOH . E 5 HOH A 36 536 91 HOH HOH . E 5 HOH A 37 537 242 HOH HOH . E 5 HOH A 38 538 9 HOH HOH . E 5 HOH A 39 539 124 HOH HOH . E 5 HOH A 40 540 192 HOH HOH . E 5 HOH A 41 541 31 HOH HOH . E 5 HOH A 42 542 88 HOH HOH . E 5 HOH A 43 543 185 HOH HOH . E 5 HOH A 44 544 43 HOH HOH . E 5 HOH A 45 545 100 HOH HOH . E 5 HOH A 46 546 57 HOH HOH . E 5 HOH A 47 547 221 HOH HOH . E 5 HOH A 48 548 50 HOH HOH . E 5 HOH A 49 549 40 HOH HOH . E 5 HOH A 50 550 215 HOH HOH . E 5 HOH A 51 551 106 HOH HOH . E 5 HOH A 52 552 174 HOH HOH . E 5 HOH A 53 553 139 HOH HOH . E 5 HOH A 54 554 116 HOH HOH . E 5 HOH A 55 555 81 HOH HOH . E 5 HOH A 56 556 273 HOH HOH . E 5 HOH A 57 557 69 HOH HOH . E 5 HOH A 58 558 83 HOH HOH . E 5 HOH A 59 559 274 HOH HOH . E 5 HOH A 60 560 163 HOH HOH . E 5 HOH A 61 561 66 HOH HOH . E 5 HOH A 62 562 13 HOH HOH . E 5 HOH A 63 563 214 HOH HOH . E 5 HOH A 64 564 228 HOH HOH . E 5 HOH A 65 565 110 HOH HOH . E 5 HOH A 66 566 137 HOH HOH . E 5 HOH A 67 567 23 HOH HOH . E 5 HOH A 68 568 158 HOH HOH . E 5 HOH A 69 569 72 HOH HOH . E 5 HOH A 70 570 76 HOH HOH . E 5 HOH A 71 571 94 HOH HOH . E 5 HOH A 72 572 99 HOH HOH . E 5 HOH A 73 573 44 HOH HOH . E 5 HOH A 74 574 211 HOH HOH . E 5 HOH A 75 575 25 HOH HOH . E 5 HOH A 76 576 169 HOH HOH . E 5 HOH A 77 577 2 HOH HOH . E 5 HOH A 78 578 123 HOH HOH . E 5 HOH A 79 579 132 HOH HOH . E 5 HOH A 80 580 138 HOH HOH . E 5 HOH A 81 581 52 HOH HOH . E 5 HOH A 82 582 105 HOH HOH . E 5 HOH A 83 583 41 HOH HOH . E 5 HOH A 84 584 121 HOH HOH . E 5 HOH A 85 585 177 HOH HOH . E 5 HOH A 86 586 12 HOH HOH . E 5 HOH A 87 587 46 HOH HOH . E 5 HOH A 88 588 87 HOH HOH . E 5 HOH A 89 589 191 HOH HOH . E 5 HOH A 90 590 150 HOH HOH . E 5 HOH A 91 591 198 HOH HOH . E 5 HOH A 92 592 162 HOH HOH . E 5 HOH A 93 593 10 HOH HOH . E 5 HOH A 94 594 127 HOH HOH . E 5 HOH A 95 595 246 HOH HOH . E 5 HOH A 96 596 251 HOH HOH . E 5 HOH A 97 597 18 HOH HOH . E 5 HOH A 98 598 152 HOH HOH . E 5 HOH A 99 599 82 HOH HOH . E 5 HOH A 100 600 19 HOH HOH . E 5 HOH A 101 601 133 HOH HOH . E 5 HOH A 102 602 28 HOH HOH . E 5 HOH A 103 603 21 HOH HOH . E 5 HOH A 104 604 5 HOH HOH . E 5 HOH A 105 605 29 HOH HOH . E 5 HOH A 106 606 241 HOH HOH . E 5 HOH A 107 607 33 HOH HOH . E 5 HOH A 108 608 155 HOH HOH . E 5 HOH A 109 609 63 HOH HOH . E 5 HOH A 110 610 3 HOH HOH . E 5 HOH A 111 611 166 HOH HOH . E 5 HOH A 112 612 56 HOH HOH . E 5 HOH A 113 613 118 HOH HOH . E 5 HOH A 114 614 255 HOH HOH . E 5 HOH A 115 615 26 HOH HOH . E 5 HOH A 116 616 151 HOH HOH . E 5 HOH A 117 617 234 HOH HOH . E 5 HOH A 118 618 260 HOH HOH . E 5 HOH A 119 619 75 HOH HOH . E 5 HOH A 120 620 71 HOH HOH . E 5 HOH A 121 621 22 HOH HOH . E 5 HOH A 122 622 244 HOH HOH . E 5 HOH A 123 623 15 HOH HOH . E 5 HOH A 124 624 143 HOH HOH . E 5 HOH A 125 625 172 HOH HOH . E 5 HOH A 126 626 125 HOH HOH . E 5 HOH A 127 627 78 HOH HOH . E 5 HOH A 128 628 212 HOH HOH . E 5 HOH A 129 629 186 HOH HOH . E 5 HOH A 130 630 111 HOH HOH . E 5 HOH A 131 631 37 HOH HOH . E 5 HOH A 132 632 14 HOH HOH . E 5 HOH A 133 633 117 HOH HOH . E 5 HOH A 134 634 45 HOH HOH . E 5 HOH A 135 635 68 HOH HOH . E 5 HOH A 136 636 49 HOH HOH . E 5 HOH A 137 637 230 HOH HOH . E 5 HOH A 138 638 270 HOH HOH . E 5 HOH A 139 639 27 HOH HOH . E 5 HOH A 140 640 134 HOH HOH . E 5 HOH A 141 641 20 HOH HOH . E 5 HOH A 142 642 136 HOH HOH . E 5 HOH A 143 643 193 HOH HOH . E 5 HOH A 144 644 171 HOH HOH . E 5 HOH A 145 645 235 HOH HOH . E 5 HOH A 146 646 51 HOH HOH . E 5 HOH A 147 647 112 HOH HOH . E 5 HOH A 148 648 65 HOH HOH . E 5 HOH A 149 649 245 HOH HOH . E 5 HOH A 150 650 39 HOH HOH . E 5 HOH A 151 651 240 HOH HOH . E 5 HOH A 152 652 67 HOH HOH . E 5 HOH A 153 653 239 HOH HOH . E 5 HOH A 154 654 17 HOH HOH . E 5 HOH A 155 655 35 HOH HOH . E 5 HOH A 156 656 202 HOH HOH . E 5 HOH A 157 657 24 HOH HOH . E 5 HOH A 158 658 7 HOH HOH . E 5 HOH A 159 659 58 HOH HOH . E 5 HOH A 160 660 32 HOH HOH . E 5 HOH A 161 661 130 HOH HOH . E 5 HOH A 162 662 145 HOH HOH . E 5 HOH A 163 663 266 HOH HOH . E 5 HOH A 164 664 232 HOH HOH . E 5 HOH A 165 665 11 HOH HOH . E 5 HOH A 166 666 108 HOH HOH . E 5 HOH A 167 667 42 HOH HOH . E 5 HOH A 168 668 140 HOH HOH . E 5 HOH A 169 669 60 HOH HOH . E 5 HOH A 170 670 4 HOH HOH . E 5 HOH A 171 671 73 HOH HOH . E 5 HOH A 172 672 1 HOH HOH . E 5 HOH A 173 673 36 HOH HOH . E 5 HOH A 174 674 89 HOH HOH . E 5 HOH A 175 675 115 HOH HOH . E 5 HOH A 176 676 79 HOH HOH . E 5 HOH A 177 677 62 HOH HOH . E 5 HOH A 178 678 97 HOH HOH . E 5 HOH A 179 679 196 HOH HOH . E 5 HOH A 180 680 142 HOH HOH . E 5 HOH A 181 681 53 HOH HOH . E 5 HOH A 182 682 226 HOH HOH . E 5 HOH A 183 683 184 HOH HOH . E 5 HOH A 184 684 85 HOH HOH . E 5 HOH A 185 685 102 HOH HOH . E 5 HOH A 186 686 107 HOH HOH . E 5 HOH A 187 687 6 HOH HOH . E 5 HOH A 188 688 74 HOH HOH . E 5 HOH A 189 689 219 HOH HOH . E 5 HOH A 190 690 258 HOH HOH . E 5 HOH A 191 691 120 HOH HOH . E 5 HOH A 192 692 253 HOH HOH . E 5 HOH A 193 693 122 HOH HOH . E 5 HOH A 194 694 54 HOH HOH . E 5 HOH A 195 695 61 HOH HOH . E 5 HOH A 196 696 263 HOH HOH . E 5 HOH A 197 697 96 HOH HOH . E 5 HOH A 198 698 238 HOH HOH . E 5 HOH A 199 699 182 HOH HOH . E 5 HOH A 200 700 80 HOH HOH . E 5 HOH A 201 701 38 HOH HOH . E 5 HOH A 202 702 165 HOH HOH . E 5 HOH A 203 703 149 HOH HOH . E 5 HOH A 204 704 173 HOH HOH . E 5 HOH A 205 705 146 HOH HOH . E 5 HOH A 206 706 156 HOH HOH . E 5 HOH A 207 707 264 HOH HOH . E 5 HOH A 208 708 8 HOH HOH . E 5 HOH A 209 709 104 HOH HOH . E 5 HOH A 210 710 248 HOH HOH . E 5 HOH A 211 711 207 HOH HOH . E 5 HOH A 212 712 157 HOH HOH . E 5 HOH A 213 713 197 HOH HOH . E 5 HOH A 214 714 153 HOH HOH . E 5 HOH A 215 715 183 HOH HOH . E 5 HOH A 216 716 227 HOH HOH . E 5 HOH A 217 717 16 HOH HOH . E 5 HOH A 218 718 92 HOH HOH . E 5 HOH A 219 719 204 HOH HOH . E 5 HOH A 220 720 190 HOH HOH . E 5 HOH A 221 721 103 HOH HOH . E 5 HOH A 222 722 55 HOH HOH . E 5 HOH A 223 723 225 HOH HOH . E 5 HOH A 224 724 164 HOH HOH . E 5 HOH A 225 725 231 HOH HOH . E 5 HOH A 226 726 48 HOH HOH . E 5 HOH A 227 727 250 HOH HOH . E 5 HOH A 228 728 213 HOH HOH . E 5 HOH A 229 729 236 HOH HOH . E 5 HOH A 230 730 128 HOH HOH . E 5 HOH A 231 731 216 HOH HOH . E 5 HOH A 232 732 77 HOH HOH . E 5 HOH A 233 733 206 HOH HOH . E 5 HOH A 234 734 210 HOH HOH . E 5 HOH A 235 735 209 HOH HOH . E 5 HOH A 236 736 101 HOH HOH . E 5 HOH A 237 737 93 HOH HOH . E 5 HOH A 238 738 109 HOH HOH . E 5 HOH A 239 739 272 HOH HOH . E 5 HOH A 240 740 189 HOH HOH . E 5 HOH A 241 741 86 HOH HOH . E 5 HOH A 242 742 252 HOH HOH . E 5 HOH A 243 743 203 HOH HOH . E 5 HOH A 244 744 218 HOH HOH . E 5 HOH A 245 745 170 HOH HOH . E 5 HOH A 246 746 126 HOH HOH . E 5 HOH A 247 747 267 HOH HOH . E 5 HOH A 248 748 265 HOH HOH . E 5 HOH A 249 749 222 HOH HOH . E 5 HOH A 250 750 247 HOH HOH . E 5 HOH A 251 751 195 HOH HOH . E 5 HOH A 252 752 175 HOH HOH . E 5 HOH A 253 753 119 HOH HOH . E 5 HOH A 254 754 95 HOH HOH . E 5 HOH A 255 755 114 HOH HOH . E 5 HOH A 256 756 194 HOH HOH . E 5 HOH A 257 757 259 HOH HOH . E 5 HOH A 258 758 30 HOH HOH . E 5 HOH A 259 759 129 HOH HOH . E 5 HOH A 260 760 233 HOH HOH . E 5 HOH A 261 761 223 HOH HOH . E 5 HOH A 262 762 199 HOH HOH . E 5 HOH A 263 763 205 HOH HOH . E 5 HOH A 264 764 159 HOH HOH . E 5 HOH A 265 765 257 HOH HOH . E 5 HOH A 266 766 217 HOH HOH . E 5 HOH A 267 767 167 HOH HOH . E 5 HOH A 268 768 180 HOH HOH . E 5 HOH A 269 769 249 HOH HOH . E 5 HOH A 270 770 256 HOH HOH . E 5 HOH A 271 771 154 HOH HOH . E 5 HOH A 272 772 181 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 39.602 _atom_site.Cartn_y 6.911 _atom_site.Cartn_z 13.061 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #