data_6QO6 # _model_server_result.job_id pWW8YGLZyDxY0TeP84a--g _model_server_result.datetime_utc '2024-11-07 08:53:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qo6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6QO6 # _exptl.entry_id 6QO6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 148.162 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-METHOXYBENZIMIDAZOLE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QO6 _cell.length_a 74.077 _cell.length_b 78.772 _cell.length_c 86.324 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QO6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C8 H8 N2 O' _chem_comp.formula_weight 148.162 _chem_comp.id 5OB _chem_comp.mon_nstd_flag . _chem_comp.name 5-METHOXYBENZIMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C2 5OB sing 1 n y N3 C3A 5OB sing 2 n y N3 H31N 5OB sing 3 n n N1 C2 5OB doub 4 n y N1 C7A 5OB sing 5 n y C2 H21 5OB sing 6 n n C7A C3A 5OB doub 7 n y C7A C7 5OB sing 8 n y C3A C4 5OB sing 9 n y C4 C5 5OB doub 10 n y C4 H41 5OB sing 11 n n C5 C6 5OB sing 12 n y C5 O10 5OB sing 13 n n C6 C7 5OB doub 14 n y C6 H61 5OB sing 15 n n C7 H71 5OB sing 16 n n O10 C11 5OB sing 17 n n C11 H111 5OB sing 18 n n C11 H112 5OB sing 19 n n C11 H113 5OB sing 20 n n # _atom_sites.entry_id 6QO6 _atom_sites.fract_transf_matrix[1][1] 0.013499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012695 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 5OB A 1 301 2 5OB LIG . D 2 5OB B 1 301 3 5OB LIG . E 3 HOH A 1 401 130 HOH HOH . E 3 HOH A 2 402 71 HOH HOH . E 3 HOH A 3 403 11 HOH HOH . E 3 HOH A 4 404 34 HOH HOH . E 3 HOH A 5 405 160 HOH HOH . E 3 HOH A 6 406 93 HOH HOH . E 3 HOH A 7 407 37 HOH HOH . E 3 HOH A 8 408 63 HOH HOH . E 3 HOH A 9 409 144 HOH HOH . E 3 HOH A 10 410 142 HOH HOH . E 3 HOH A 11 411 137 HOH HOH . E 3 HOH A 12 412 47 HOH HOH . E 3 HOH A 13 413 147 HOH HOH . E 3 HOH A 14 414 205 HOH HOH . E 3 HOH A 15 415 214 HOH HOH . E 3 HOH A 16 416 174 HOH HOH . E 3 HOH A 17 417 56 HOH HOH . E 3 HOH A 18 418 66 HOH HOH . E 3 HOH A 19 419 43 HOH HOH . E 3 HOH A 20 420 70 HOH HOH . E 3 HOH A 21 421 59 HOH HOH . E 3 HOH A 22 422 2 HOH HOH . E 3 HOH A 23 423 13 HOH HOH . E 3 HOH A 24 424 39 HOH HOH . E 3 HOH A 25 425 26 HOH HOH . E 3 HOH A 26 426 46 HOH HOH . E 3 HOH A 27 427 24 HOH HOH . E 3 HOH A 28 428 4 HOH HOH . E 3 HOH A 29 429 131 HOH HOH . E 3 HOH A 30 430 29 HOH HOH . E 3 HOH A 31 431 53 HOH HOH . E 3 HOH A 32 432 148 HOH HOH . E 3 HOH A 33 433 32 HOH HOH . E 3 HOH A 34 434 48 HOH HOH . E 3 HOH A 35 435 17 HOH HOH . E 3 HOH A 36 436 90 HOH HOH . E 3 HOH A 37 437 172 HOH HOH . E 3 HOH A 38 438 7 HOH HOH . E 3 HOH A 39 439 251 HOH HOH . E 3 HOH A 40 440 237 HOH HOH . E 3 HOH A 41 441 44 HOH HOH . E 3 HOH A 42 442 245 HOH HOH . E 3 HOH A 43 443 212 HOH HOH . E 3 HOH A 44 444 103 HOH HOH . E 3 HOH A 45 445 88 HOH HOH . E 3 HOH A 46 446 27 HOH HOH . E 3 HOH A 47 447 55 HOH HOH . E 3 HOH A 48 448 3 HOH HOH . E 3 HOH A 49 449 128 HOH HOH . E 3 HOH A 50 450 5 HOH HOH . E 3 HOH A 51 451 155 HOH HOH . E 3 HOH A 52 452 45 HOH HOH . E 3 HOH A 53 453 170 HOH HOH . E 3 HOH A 54 454 113 HOH HOH . E 3 HOH A 55 455 1 HOH HOH . E 3 HOH A 56 456 35 HOH HOH . E 3 HOH A 57 457 169 HOH HOH . E 3 HOH A 58 458 73 HOH HOH . E 3 HOH A 59 459 8 HOH HOH . E 3 HOH A 60 460 82 HOH HOH . E 3 HOH A 61 461 132 HOH HOH . E 3 HOH A 62 462 50 HOH HOH . E 3 HOH A 63 463 23 HOH HOH . E 3 HOH A 64 464 30 HOH HOH . E 3 HOH A 65 465 120 HOH HOH . E 3 HOH A 66 466 250 HOH HOH . E 3 HOH A 67 467 112 HOH HOH . E 3 HOH A 68 468 100 HOH HOH . E 3 HOH A 69 469 6 HOH HOH . E 3 HOH A 70 470 104 HOH HOH . E 3 HOH A 71 471 67 HOH HOH . E 3 HOH A 72 472 52 HOH HOH . E 3 HOH A 73 473 141 HOH HOH . E 3 HOH A 74 474 65 HOH HOH . E 3 HOH A 75 475 15 HOH HOH . E 3 HOH A 76 476 64 HOH HOH . E 3 HOH A 77 477 175 HOH HOH . E 3 HOH A 78 478 201 HOH HOH . E 3 HOH A 79 479 221 HOH HOH . E 3 HOH A 80 480 49 HOH HOH . E 3 HOH A 81 481 77 HOH HOH . E 3 HOH A 82 482 209 HOH HOH . E 3 HOH A 83 483 68 HOH HOH . E 3 HOH A 84 484 248 HOH HOH . E 3 HOH A 85 485 102 HOH HOH . E 3 HOH A 86 486 156 HOH HOH . E 3 HOH A 87 487 152 HOH HOH . E 3 HOH A 88 488 101 HOH HOH . E 3 HOH A 89 489 94 HOH HOH . E 3 HOH A 90 490 168 HOH HOH . E 3 HOH A 91 491 225 HOH HOH . E 3 HOH A 92 492 157 HOH HOH . E 3 HOH A 93 493 84 HOH HOH . E 3 HOH A 94 494 195 HOH HOH . E 3 HOH A 95 495 69 HOH HOH . E 3 HOH A 96 496 96 HOH HOH . E 3 HOH A 97 497 193 HOH HOH . E 3 HOH A 98 498 95 HOH HOH . E 3 HOH A 99 499 240 HOH HOH . E 3 HOH A 100 500 181 HOH HOH . E 3 HOH A 101 501 217 HOH HOH . E 3 HOH A 102 502 199 HOH HOH . E 3 HOH A 103 503 211 HOH HOH . E 3 HOH A 104 504 206 HOH HOH . E 3 HOH A 105 505 228 HOH HOH . E 3 HOH A 106 506 159 HOH HOH . E 3 HOH A 107 507 215 HOH HOH . E 3 HOH A 108 508 92 HOH HOH . E 3 HOH A 109 509 78 HOH HOH . E 3 HOH A 110 510 187 HOH HOH . E 3 HOH A 111 511 197 HOH HOH . E 3 HOH A 112 512 208 HOH HOH . E 3 HOH A 113 513 220 HOH HOH . E 3 HOH A 114 514 198 HOH HOH . E 3 HOH A 115 515 194 HOH HOH . E 3 HOH A 116 516 188 HOH HOH . E 3 HOH A 117 517 177 HOH HOH . E 3 HOH A 118 518 213 HOH HOH . E 3 HOH A 119 519 244 HOH HOH . E 3 HOH A 120 520 105 HOH HOH . E 3 HOH A 121 521 145 HOH HOH . E 3 HOH A 122 522 249 HOH HOH . E 3 HOH A 123 523 153 HOH HOH . E 3 HOH A 124 524 232 HOH HOH . F 3 HOH B 1 401 229 HOH HOH . F 3 HOH B 2 402 219 HOH HOH . F 3 HOH B 3 403 139 HOH HOH . F 3 HOH B 4 404 192 HOH HOH . F 3 HOH B 5 405 239 HOH HOH . F 3 HOH B 6 406 184 HOH HOH . F 3 HOH B 7 407 36 HOH HOH . F 3 HOH B 8 408 57 HOH HOH . F 3 HOH B 9 409 85 HOH HOH . F 3 HOH B 10 410 108 HOH HOH . F 3 HOH B 11 411 151 HOH HOH . F 3 HOH B 12 412 176 HOH HOH . F 3 HOH B 13 413 33 HOH HOH . F 3 HOH B 14 414 74 HOH HOH . F 3 HOH B 15 415 133 HOH HOH . F 3 HOH B 16 416 136 HOH HOH . F 3 HOH B 17 417 185 HOH HOH . F 3 HOH B 18 418 196 HOH HOH . F 3 HOH B 19 419 99 HOH HOH . F 3 HOH B 20 420 121 HOH HOH . F 3 HOH B 21 421 58 HOH HOH . F 3 HOH B 22 422 207 HOH HOH . F 3 HOH B 23 423 54 HOH HOH . F 3 HOH B 24 424 18 HOH HOH . F 3 HOH B 25 425 12 HOH HOH . F 3 HOH B 26 426 143 HOH HOH . F 3 HOH B 27 427 162 HOH HOH . F 3 HOH B 28 428 21 HOH HOH . F 3 HOH B 29 429 83 HOH HOH . F 3 HOH B 30 430 127 HOH HOH . F 3 HOH B 31 431 87 HOH HOH . F 3 HOH B 32 432 98 HOH HOH . F 3 HOH B 33 433 165 HOH HOH . F 3 HOH B 34 434 224 HOH HOH . F 3 HOH B 35 435 25 HOH HOH . F 3 HOH B 36 436 9 HOH HOH . F 3 HOH B 37 437 124 HOH HOH . F 3 HOH B 38 438 40 HOH HOH . F 3 HOH B 39 439 16 HOH HOH . F 3 HOH B 40 440 186 HOH HOH . F 3 HOH B 41 441 31 HOH HOH . F 3 HOH B 42 442 135 HOH HOH . F 3 HOH B 43 443 28 HOH HOH . F 3 HOH B 44 444 183 HOH HOH . F 3 HOH B 45 445 38 HOH HOH . F 3 HOH B 46 446 79 HOH HOH . F 3 HOH B 47 447 89 HOH HOH . F 3 HOH B 48 448 20 HOH HOH . F 3 HOH B 49 449 97 HOH HOH . F 3 HOH B 50 450 61 HOH HOH . F 3 HOH B 51 451 154 HOH HOH . F 3 HOH B 52 452 110 HOH HOH . F 3 HOH B 53 453 10 HOH HOH . F 3 HOH B 54 454 216 HOH HOH . F 3 HOH B 55 455 223 HOH HOH . F 3 HOH B 56 456 226 HOH HOH . F 3 HOH B 57 457 129 HOH HOH . F 3 HOH B 58 458 22 HOH HOH . F 3 HOH B 59 459 218 HOH HOH . F 3 HOH B 60 460 76 HOH HOH . F 3 HOH B 61 461 231 HOH HOH . F 3 HOH B 62 462 14 HOH HOH . F 3 HOH B 63 463 109 HOH HOH . F 3 HOH B 64 464 19 HOH HOH . F 3 HOH B 65 465 119 HOH HOH . F 3 HOH B 66 466 122 HOH HOH . F 3 HOH B 67 467 106 HOH HOH . F 3 HOH B 68 468 114 HOH HOH . F 3 HOH B 69 469 134 HOH HOH . F 3 HOH B 70 470 164 HOH HOH . F 3 HOH B 71 471 115 HOH HOH . F 3 HOH B 72 472 126 HOH HOH . F 3 HOH B 73 473 60 HOH HOH . F 3 HOH B 74 474 161 HOH HOH . F 3 HOH B 75 475 200 HOH HOH . F 3 HOH B 76 476 81 HOH HOH . F 3 HOH B 77 477 80 HOH HOH . F 3 HOH B 78 478 166 HOH HOH . F 3 HOH B 79 479 149 HOH HOH . F 3 HOH B 80 480 246 HOH HOH . F 3 HOH B 81 481 41 HOH HOH . F 3 HOH B 82 482 42 HOH HOH . F 3 HOH B 83 483 62 HOH HOH . F 3 HOH B 84 484 91 HOH HOH . F 3 HOH B 85 485 51 HOH HOH . F 3 HOH B 86 486 158 HOH HOH . F 3 HOH B 87 487 107 HOH HOH . F 3 HOH B 88 488 173 HOH HOH . F 3 HOH B 89 489 180 HOH HOH . F 3 HOH B 90 490 140 HOH HOH . F 3 HOH B 91 491 235 HOH HOH . F 3 HOH B 92 492 202 HOH HOH . F 3 HOH B 93 493 243 HOH HOH . F 3 HOH B 94 494 191 HOH HOH . F 3 HOH B 95 495 190 HOH HOH . F 3 HOH B 96 496 182 HOH HOH . F 3 HOH B 97 497 236 HOH HOH . F 3 HOH B 98 498 86 HOH HOH . F 3 HOH B 99 499 204 HOH HOH . F 3 HOH B 100 500 247 HOH HOH . F 3 HOH B 101 501 116 HOH HOH . F 3 HOH B 102 502 72 HOH HOH . F 3 HOH B 103 503 150 HOH HOH . F 3 HOH B 104 504 163 HOH HOH . F 3 HOH B 105 505 138 HOH HOH . F 3 HOH B 106 506 111 HOH HOH . F 3 HOH B 107 507 167 HOH HOH . F 3 HOH B 108 508 178 HOH HOH . F 3 HOH B 109 509 227 HOH HOH . F 3 HOH B 110 510 189 HOH HOH . F 3 HOH B 111 511 230 HOH HOH . F 3 HOH B 112 512 238 HOH HOH . F 3 HOH B 113 513 179 HOH HOH . F 3 HOH B 114 514 241 HOH HOH . F 3 HOH B 115 515 123 HOH HOH . F 3 HOH B 116 516 203 HOH HOH . F 3 HOH B 117 517 242 HOH HOH . F 3 HOH B 118 518 234 HOH HOH . F 3 HOH B 119 519 75 HOH HOH . F 3 HOH B 120 520 117 HOH HOH . F 3 HOH B 121 521 210 HOH HOH . F 3 HOH B 122 522 222 HOH HOH . F 3 HOH B 123 523 233 HOH HOH . F 3 HOH B 124 524 146 HOH HOH . F 3 HOH B 125 525 125 HOH HOH . F 3 HOH B 126 526 171 HOH HOH . F 3 HOH B 127 527 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 5OB . . . C 2 -18.009 18.21 -12.547 1 41.27 ? N3 5OB 301 A 1 HETATM 2 N N1 5OB . . . C 2 -18.502 16.028 -12.736 1 30.8 ? N1 5OB 301 A 1 HETATM 3 C C2 5OB . . . C 2 -17.466 16.967 -12.691 1 30.91 ? C2 5OB 301 A 1 HETATM 4 C C7A 5OB . . . C 2 -19.692 16.701 -12.617 1 30.16 ? C7A 5OB 301 A 1 HETATM 5 C C3A 5OB . . . C 2 -19.391 18.09 -12.494 1 32.9 ? C3A 5OB 301 A 1 HETATM 6 C C4 5OB . . . C 2 -20.432 19.046 -12.352 1 33.98 ? C4 5OB 301 A 1 HETATM 7 C C5 5OB . . . C 2 -21.778 18.587 -12.334 1 36.07 ? C5 5OB 301 A 1 HETATM 8 C C6 5OB . . . C 2 -22.094 17.177 -12.461 1 37.28 ? C6 5OB 301 A 1 HETATM 9 C C7 5OB . . . C 2 -21.062 16.242 -12.591 1 37.2 ? C7 5OB 301 A 1 HETATM 10 O O10 5OB . . . C 2 -22.839 19.508 -12.187 1 39.76 ? O10 5OB 301 A 1 HETATM 11 C C11 5OB . . . C 2 -22.399 20.794 -12.359 1 47.97 ? C11 5OB 301 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #