data_6QOV # _model_server_result.job_id L79iELUselBe38o0iPoLhA _model_server_result.datetime_utc '2024-11-22 20:40:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qov # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6QOV # _exptl.entry_id 6QOV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 184.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6-phenylpyridin-3-yl)methanamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QOV _cell.length_a 75.033 _cell.length_b 79.041 _cell.length_c 87.583 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QOV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C12 H12 N2' _chem_comp.formula_weight 184.237 _chem_comp.id JAH _chem_comp.mon_nstd_flag . _chem_comp.name (6-phenylpyridin-3-yl)methanamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C02 JAH sing 173 n n C02 C03 JAH sing 174 n n C03 C08 JAH doub 175 n y C03 C04 JAH sing 176 n y C08 N07 JAH sing 177 n y C04 C05 JAH doub 178 n y N07 C06 JAH doub 179 n y C05 C06 JAH sing 180 n y C06 C09 JAH sing 181 n n C09 C10 JAH doub 182 n y C09 C14 JAH sing 183 n y C10 C11 JAH sing 184 n y C14 C13 JAH doub 185 n y C11 C12 JAH doub 186 n y C13 C12 JAH sing 187 n y C10 H1 JAH sing 188 n n C13 H2 JAH sing 189 n n N01 H3 JAH sing 190 n n N01 H4 JAH sing 191 n n C02 H6 JAH sing 192 n n C02 H7 JAH sing 193 n n C04 H8 JAH sing 194 n n C05 H9 JAH sing 195 n n C08 H10 JAH sing 196 n n C11 H11 JAH sing 197 n n C12 H12 JAH sing 198 n n C14 H13 JAH sing 199 n n # _atom_sites.entry_id 6QOV _atom_sites.fract_transf_matrix[1][1] 0.013327 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012652 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JAH A 1 301 2 JAH LIG . D 2 JAH B 1 301 1 JAH LIG . E 3 HOH A 1 401 282 HOH HOH . E 3 HOH A 2 402 278 HOH HOH . E 3 HOH A 3 403 222 HOH HOH . E 3 HOH A 4 404 36 HOH HOH . E 3 HOH A 5 405 22 HOH HOH . E 3 HOH A 6 406 214 HOH HOH . E 3 HOH A 7 407 160 HOH HOH . E 3 HOH A 8 408 141 HOH HOH . E 3 HOH A 9 409 99 HOH HOH . E 3 HOH A 10 410 246 HOH HOH . E 3 HOH A 11 411 229 HOH HOH . E 3 HOH A 12 412 16 HOH HOH . E 3 HOH A 13 413 200 HOH HOH . E 3 HOH A 14 414 138 HOH HOH . E 3 HOH A 15 415 92 HOH HOH . E 3 HOH A 16 416 41 HOH HOH . E 3 HOH A 17 417 179 HOH HOH . E 3 HOH A 18 418 30 HOH HOH . E 3 HOH A 19 419 277 HOH HOH . E 3 HOH A 20 420 185 HOH HOH . E 3 HOH A 21 421 65 HOH HOH . E 3 HOH A 22 422 285 HOH HOH . E 3 HOH A 23 423 196 HOH HOH . E 3 HOH A 24 424 44 HOH HOH . E 3 HOH A 25 425 245 HOH HOH . E 3 HOH A 26 426 218 HOH HOH . E 3 HOH A 27 427 34 HOH HOH . E 3 HOH A 28 428 60 HOH HOH . E 3 HOH A 29 429 48 HOH HOH . E 3 HOH A 30 430 268 HOH HOH . E 3 HOH A 31 431 258 HOH HOH . E 3 HOH A 32 432 286 HOH HOH . E 3 HOH A 33 433 257 HOH HOH . E 3 HOH A 34 434 216 HOH HOH . E 3 HOH A 35 435 283 HOH HOH . E 3 HOH A 36 436 124 HOH HOH . E 3 HOH A 37 437 47 HOH HOH . E 3 HOH A 38 438 111 HOH HOH . E 3 HOH A 39 439 154 HOH HOH . E 3 HOH A 40 440 33 HOH HOH . E 3 HOH A 41 441 7 HOH HOH . E 3 HOH A 42 442 25 HOH HOH . E 3 HOH A 43 443 2 HOH HOH . E 3 HOH A 44 444 256 HOH HOH . E 3 HOH A 45 445 135 HOH HOH . E 3 HOH A 46 446 107 HOH HOH . E 3 HOH A 47 447 8 HOH HOH . E 3 HOH A 48 448 40 HOH HOH . E 3 HOH A 49 449 199 HOH HOH . E 3 HOH A 50 450 269 HOH HOH . E 3 HOH A 51 451 241 HOH HOH . E 3 HOH A 52 452 203 HOH HOH . E 3 HOH A 53 453 21 HOH HOH . E 3 HOH A 54 454 262 HOH HOH . E 3 HOH A 55 455 10 HOH HOH . E 3 HOH A 56 456 55 HOH HOH . E 3 HOH A 57 457 100 HOH HOH . E 3 HOH A 58 458 238 HOH HOH . E 3 HOH A 59 459 101 HOH HOH . E 3 HOH A 60 460 77 HOH HOH . E 3 HOH A 61 461 3 HOH HOH . E 3 HOH A 62 462 211 HOH HOH . E 3 HOH A 63 463 284 HOH HOH . E 3 HOH A 64 464 279 HOH HOH . E 3 HOH A 65 465 119 HOH HOH . E 3 HOH A 66 466 13 HOH HOH . E 3 HOH A 67 467 12 HOH HOH . E 3 HOH A 68 468 19 HOH HOH . E 3 HOH A 69 469 29 HOH HOH . E 3 HOH A 70 470 1 HOH HOH . E 3 HOH A 71 471 170 HOH HOH . E 3 HOH A 72 472 139 HOH HOH . E 3 HOH A 73 473 157 HOH HOH . E 3 HOH A 74 474 4 HOH HOH . E 3 HOH A 75 475 74 HOH HOH . E 3 HOH A 76 476 265 HOH HOH . E 3 HOH A 77 477 73 HOH HOH . E 3 HOH A 78 478 153 HOH HOH . E 3 HOH A 79 479 182 HOH HOH . E 3 HOH A 80 480 168 HOH HOH . E 3 HOH A 81 481 140 HOH HOH . E 3 HOH A 82 482 5 HOH HOH . E 3 HOH A 83 483 263 HOH HOH . E 3 HOH A 84 484 273 HOH HOH . E 3 HOH A 85 485 38 HOH HOH . E 3 HOH A 86 486 276 HOH HOH . E 3 HOH A 87 487 148 HOH HOH . E 3 HOH A 88 488 223 HOH HOH . E 3 HOH A 89 489 112 HOH HOH . E 3 HOH A 90 490 224 HOH HOH . E 3 HOH A 91 491 80 HOH HOH . E 3 HOH A 92 492 166 HOH HOH . E 3 HOH A 93 493 59 HOH HOH . E 3 HOH A 94 494 127 HOH HOH . E 3 HOH A 95 495 49 HOH HOH . E 3 HOH A 96 496 43 HOH HOH . E 3 HOH A 97 497 35 HOH HOH . E 3 HOH A 98 498 133 HOH HOH . E 3 HOH A 99 499 66 HOH HOH . E 3 HOH A 100 500 136 HOH HOH . E 3 HOH A 101 501 118 HOH HOH . E 3 HOH A 102 502 61 HOH HOH . E 3 HOH A 103 503 27 HOH HOH . E 3 HOH A 104 504 69 HOH HOH . E 3 HOH A 105 505 72 HOH HOH . E 3 HOH A 106 506 95 HOH HOH . E 3 HOH A 107 507 52 HOH HOH . E 3 HOH A 108 508 230 HOH HOH . E 3 HOH A 109 509 235 HOH HOH . E 3 HOH A 110 510 191 HOH HOH . E 3 HOH A 111 511 120 HOH HOH . E 3 HOH A 112 512 90 HOH HOH . E 3 HOH A 113 513 81 HOH HOH . E 3 HOH A 114 514 215 HOH HOH . E 3 HOH A 115 515 50 HOH HOH . E 3 HOH A 116 516 165 HOH HOH . E 3 HOH A 117 517 146 HOH HOH . E 3 HOH A 118 518 255 HOH HOH . E 3 HOH A 119 519 221 HOH HOH . E 3 HOH A 120 520 114 HOH HOH . E 3 HOH A 121 521 167 HOH HOH . E 3 HOH A 122 522 94 HOH HOH . E 3 HOH A 123 523 109 HOH HOH . E 3 HOH A 124 524 181 HOH HOH . E 3 HOH A 125 525 220 HOH HOH . E 3 HOH A 126 526 264 HOH HOH . E 3 HOH A 127 527 158 HOH HOH . E 3 HOH A 128 528 68 HOH HOH . E 3 HOH A 129 529 280 HOH HOH . E 3 HOH A 130 530 260 HOH HOH . E 3 HOH A 131 531 204 HOH HOH . E 3 HOH A 132 532 78 HOH HOH . E 3 HOH A 133 533 46 HOH HOH . E 3 HOH A 134 534 126 HOH HOH . E 3 HOH A 135 535 201 HOH HOH . E 3 HOH A 136 536 207 HOH HOH . E 3 HOH A 137 537 242 HOH HOH . E 3 HOH A 138 538 234 HOH HOH . E 3 HOH A 139 539 188 HOH HOH . E 3 HOH A 140 540 226 HOH HOH . E 3 HOH A 141 541 91 HOH HOH . E 3 HOH A 142 542 102 HOH HOH . E 3 HOH A 143 543 231 HOH HOH . E 3 HOH A 144 544 209 HOH HOH . E 3 HOH A 145 545 208 HOH HOH . F 3 HOH B 1 401 243 HOH HOH . F 3 HOH B 2 402 134 HOH HOH . F 3 HOH B 3 403 130 HOH HOH . F 3 HOH B 4 404 117 HOH HOH . F 3 HOH B 5 405 210 HOH HOH . F 3 HOH B 6 406 64 HOH HOH . F 3 HOH B 7 407 62 HOH HOH . F 3 HOH B 8 408 163 HOH HOH . F 3 HOH B 9 409 236 HOH HOH . F 3 HOH B 10 410 67 HOH HOH . F 3 HOH B 11 411 82 HOH HOH . F 3 HOH B 12 412 150 HOH HOH . F 3 HOH B 13 413 71 HOH HOH . F 3 HOH B 14 414 281 HOH HOH . F 3 HOH B 15 415 156 HOH HOH . F 3 HOH B 16 416 23 HOH HOH . F 3 HOH B 17 417 17 HOH HOH . F 3 HOH B 18 418 131 HOH HOH . F 3 HOH B 19 419 28 HOH HOH . F 3 HOH B 20 420 20 HOH HOH . F 3 HOH B 21 421 180 HOH HOH . F 3 HOH B 22 422 152 HOH HOH . F 3 HOH B 23 423 237 HOH HOH . F 3 HOH B 24 424 110 HOH HOH . F 3 HOH B 25 425 173 HOH HOH . F 3 HOH B 26 426 18 HOH HOH . F 3 HOH B 27 427 143 HOH HOH . F 3 HOH B 28 428 121 HOH HOH . F 3 HOH B 29 429 270 HOH HOH . F 3 HOH B 30 430 116 HOH HOH . F 3 HOH B 31 431 251 HOH HOH . F 3 HOH B 32 432 123 HOH HOH . F 3 HOH B 33 433 93 HOH HOH . F 3 HOH B 34 434 151 HOH HOH . F 3 HOH B 35 435 88 HOH HOH . F 3 HOH B 36 436 26 HOH HOH . F 3 HOH B 37 437 233 HOH HOH . F 3 HOH B 38 438 228 HOH HOH . F 3 HOH B 39 439 137 HOH HOH . F 3 HOH B 40 440 161 HOH HOH . F 3 HOH B 41 441 253 HOH HOH . F 3 HOH B 42 442 219 HOH HOH . F 3 HOH B 43 443 227 HOH HOH . F 3 HOH B 44 444 42 HOH HOH . F 3 HOH B 45 445 145 HOH HOH . F 3 HOH B 46 446 9 HOH HOH . F 3 HOH B 47 447 63 HOH HOH . F 3 HOH B 48 448 57 HOH HOH . F 3 HOH B 49 449 275 HOH HOH . F 3 HOH B 50 450 58 HOH HOH . F 3 HOH B 51 451 162 HOH HOH . F 3 HOH B 52 452 31 HOH HOH . F 3 HOH B 53 453 24 HOH HOH . F 3 HOH B 54 454 70 HOH HOH . F 3 HOH B 55 455 75 HOH HOH . F 3 HOH B 56 456 51 HOH HOH . F 3 HOH B 57 457 189 HOH HOH . F 3 HOH B 58 458 83 HOH HOH . F 3 HOH B 59 459 175 HOH HOH . F 3 HOH B 60 460 84 HOH HOH . F 3 HOH B 61 461 244 HOH HOH . F 3 HOH B 62 462 184 HOH HOH . F 3 HOH B 63 463 14 HOH HOH . F 3 HOH B 64 464 142 HOH HOH . F 3 HOH B 65 465 15 HOH HOH . F 3 HOH B 66 466 205 HOH HOH . F 3 HOH B 67 467 6 HOH HOH . F 3 HOH B 68 468 105 HOH HOH . F 3 HOH B 69 469 149 HOH HOH . F 3 HOH B 70 470 202 HOH HOH . F 3 HOH B 71 471 11 HOH HOH . F 3 HOH B 72 472 76 HOH HOH . F 3 HOH B 73 473 250 HOH HOH . F 3 HOH B 74 474 86 HOH HOH . F 3 HOH B 75 475 240 HOH HOH . F 3 HOH B 76 476 174 HOH HOH . F 3 HOH B 77 477 190 HOH HOH . F 3 HOH B 78 478 249 HOH HOH . F 3 HOH B 79 479 45 HOH HOH . F 3 HOH B 80 480 128 HOH HOH . F 3 HOH B 81 481 267 HOH HOH . F 3 HOH B 82 482 104 HOH HOH . F 3 HOH B 83 483 54 HOH HOH . F 3 HOH B 84 484 144 HOH HOH . F 3 HOH B 85 485 232 HOH HOH . F 3 HOH B 86 486 198 HOH HOH . F 3 HOH B 87 487 106 HOH HOH . F 3 HOH B 88 488 259 HOH HOH . F 3 HOH B 89 489 98 HOH HOH . F 3 HOH B 90 490 79 HOH HOH . F 3 HOH B 91 491 37 HOH HOH . F 3 HOH B 92 492 178 HOH HOH . F 3 HOH B 93 493 217 HOH HOH . F 3 HOH B 94 494 53 HOH HOH . F 3 HOH B 95 495 271 HOH HOH . F 3 HOH B 96 496 89 HOH HOH . F 3 HOH B 97 497 87 HOH HOH . F 3 HOH B 98 498 194 HOH HOH . F 3 HOH B 99 499 32 HOH HOH . F 3 HOH B 100 500 239 HOH HOH . F 3 HOH B 101 501 183 HOH HOH . F 3 HOH B 102 502 113 HOH HOH . F 3 HOH B 103 503 266 HOH HOH . F 3 HOH B 104 504 97 HOH HOH . F 3 HOH B 105 505 108 HOH HOH . F 3 HOH B 106 506 193 HOH HOH . F 3 HOH B 107 507 187 HOH HOH . F 3 HOH B 108 508 248 HOH HOH . F 3 HOH B 109 509 169 HOH HOH . F 3 HOH B 110 510 85 HOH HOH . F 3 HOH B 111 511 159 HOH HOH . F 3 HOH B 112 512 213 HOH HOH . F 3 HOH B 113 513 56 HOH HOH . F 3 HOH B 114 514 176 HOH HOH . F 3 HOH B 115 515 164 HOH HOH . F 3 HOH B 116 516 247 HOH HOH . F 3 HOH B 117 517 155 HOH HOH . F 3 HOH B 118 518 197 HOH HOH . F 3 HOH B 119 519 252 HOH HOH . F 3 HOH B 120 520 272 HOH HOH . F 3 HOH B 121 521 147 HOH HOH . F 3 HOH B 122 522 96 HOH HOH . F 3 HOH B 123 523 177 HOH HOH . F 3 HOH B 124 524 192 HOH HOH . F 3 HOH B 125 525 261 HOH HOH . F 3 HOH B 126 526 129 HOH HOH . F 3 HOH B 127 527 39 HOH HOH . F 3 HOH B 128 528 132 HOH HOH . F 3 HOH B 129 529 125 HOH HOH . F 3 HOH B 130 530 172 HOH HOH . F 3 HOH B 131 531 274 HOH HOH . F 3 HOH B 132 532 195 HOH HOH . F 3 HOH B 133 533 225 HOH HOH . F 3 HOH B 134 534 206 HOH HOH . F 3 HOH B 135 535 103 HOH HOH . F 3 HOH B 136 536 171 HOH HOH . F 3 HOH B 137 537 254 HOH HOH . F 3 HOH B 138 538 186 HOH HOH . F 3 HOH B 139 539 115 HOH HOH . F 3 HOH B 140 540 122 HOH HOH . F 3 HOH B 141 541 212 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 JAH . . . C 2 99.304 99.413 11.462 1 23.06 ? C10 JAH 301 A 1 HETATM 2 C C13 JAH . . . C 2 98.714 102.103 11.783 1 24.41 ? C13 JAH 301 A 1 HETATM 3 N N01 JAH . . . C 2 94.431 94.698 13.248 1 16.74 ? N01 JAH 301 A 1 HETATM 4 C C02 JAH . . . C 2 94.012 96.045 13.373 1 24.91 ? C02 JAH 301 A 1 HETATM 5 C C03 JAH . . . C 2 95.157 96.978 13.046 1 19.37 ? C03 JAH 301 A 1 HETATM 6 C C04 JAH . . . C 2 96.469 96.522 12.884 1 20.23 ? C04 JAH 301 A 1 HETATM 7 C C05 JAH . . . C 2 97.479 97.449 12.585 1 19.85 ? C05 JAH 301 A 1 HETATM 8 C C06 JAH . . . C 2 97.175 98.809 12.463 1 19.73 ? C06 JAH 301 A 1 HETATM 9 N N07 JAH . . . C 2 95.893 99.204 12.633 1 21.75 ? N07 JAH 301 A 1 HETATM 10 C C08 JAH . . . C 2 94.897 98.334 12.918 1 24.44 ? C08 JAH 301 A 1 HETATM 11 C C09 JAH . . . C 2 98.114 99.782 12.094 1 20.2 ? C09 JAH 301 A 1 HETATM 12 C C11 JAH . . . C 2 100.213 100.386 11.038 1 23.29 ? C11 JAH 301 A 1 HETATM 13 C C12 JAH . . . C 2 99.913 101.731 11.194 1 23.72 ? C12 JAH 301 A 1 HETATM 14 C C14 JAH . . . C 2 97.807 101.133 12.213 1 22.25 ? C14 JAH 301 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 14 #