data_6QOX # _model_server_result.job_id x413MJCR4bI3SVZo8xYmRQ _model_server_result.datetime_utc '2024-11-23 02:08:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qox # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6QOX # _exptl.entry_id 6QOX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 211.238 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl 2-(hydroxymethyl)-6~{H}-thieno[2,3-b]pyrrole-5-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QOX _cell.length_a 74.963 _cell.length_b 78.46 _cell.length_c 88.483 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QOX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H9 N O3 S' _chem_comp.formula_weight 211.238 _chem_comp.id JA5 _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl 2-(hydroxymethyl)-6~{H}-thieno[2,3-b]pyrrole-5-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 JA5 sing 173 n n C02 C03 JA5 sing 174 n n C03 C04 JA5 doub 175 n y C03 S07 JA5 sing 176 n y C04 C05 JA5 sing 177 n y S07 C06 JA5 sing 178 n y C05 C06 JA5 doub 179 n y C05 C10 JA5 sing 180 n y C06 N08 JA5 sing 181 n y C10 C09 JA5 doub 182 n y N08 C09 JA5 sing 183 n y C09 C11 JA5 sing 184 n n C11 O14 JA5 doub 185 n n C11 O12 JA5 sing 186 n n O12 C13 JA5 sing 187 n n C10 H1 JA5 sing 188 n n C13 H2 JA5 sing 189 n n C13 H3 JA5 sing 190 n n C13 H4 JA5 sing 191 n n O01 H5 JA5 sing 192 n n C02 H6 JA5 sing 193 n n C02 H7 JA5 sing 194 n n C04 H8 JA5 sing 195 n n N08 H9 JA5 sing 196 n n # _atom_sites.entry_id 6QOX _atom_sites.fract_transf_matrix[1][1] 0.01334 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012745 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 JA5 B 1 301 1 JA5 LIG . D 3 HOH A 1 301 41 HOH HOH . D 3 HOH A 2 302 137 HOH HOH . D 3 HOH A 3 303 228 HOH HOH . D 3 HOH A 4 304 84 HOH HOH . D 3 HOH A 5 305 110 HOH HOH . D 3 HOH A 6 306 61 HOH HOH . D 3 HOH A 7 307 136 HOH HOH . D 3 HOH A 8 308 49 HOH HOH . D 3 HOH A 9 309 223 HOH HOH . D 3 HOH A 10 310 29 HOH HOH . D 3 HOH A 11 311 7 HOH HOH . D 3 HOH A 12 312 242 HOH HOH . D 3 HOH A 13 313 170 HOH HOH . D 3 HOH A 14 314 219 HOH HOH . D 3 HOH A 15 315 24 HOH HOH . D 3 HOH A 16 316 252 HOH HOH . D 3 HOH A 17 317 178 HOH HOH . D 3 HOH A 18 318 115 HOH HOH . D 3 HOH A 19 319 111 HOH HOH . D 3 HOH A 20 320 147 HOH HOH . D 3 HOH A 21 321 83 HOH HOH . D 3 HOH A 22 322 51 HOH HOH . D 3 HOH A 23 323 287 HOH HOH . D 3 HOH A 24 324 96 HOH HOH . D 3 HOH A 25 325 162 HOH HOH . D 3 HOH A 26 326 258 HOH HOH . D 3 HOH A 27 327 12 HOH HOH . D 3 HOH A 28 328 169 HOH HOH . D 3 HOH A 29 329 144 HOH HOH . D 3 HOH A 30 330 186 HOH HOH . D 3 HOH A 31 331 104 HOH HOH . D 3 HOH A 32 332 6 HOH HOH . D 3 HOH A 33 333 85 HOH HOH . D 3 HOH A 34 334 117 HOH HOH . D 3 HOH A 35 335 33 HOH HOH . D 3 HOH A 36 336 74 HOH HOH . D 3 HOH A 37 337 13 HOH HOH . D 3 HOH A 38 338 247 HOH HOH . D 3 HOH A 39 339 11 HOH HOH . D 3 HOH A 40 340 98 HOH HOH . D 3 HOH A 41 341 79 HOH HOH . D 3 HOH A 42 342 142 HOH HOH . D 3 HOH A 43 343 134 HOH HOH . D 3 HOH A 44 344 5 HOH HOH . D 3 HOH A 45 345 203 HOH HOH . D 3 HOH A 46 346 10 HOH HOH . D 3 HOH A 47 347 250 HOH HOH . D 3 HOH A 48 348 16 HOH HOH . D 3 HOH A 49 349 202 HOH HOH . D 3 HOH A 50 350 48 HOH HOH . D 3 HOH A 51 351 9 HOH HOH . D 3 HOH A 52 352 180 HOH HOH . D 3 HOH A 53 353 31 HOH HOH . D 3 HOH A 54 354 18 HOH HOH . D 3 HOH A 55 355 21 HOH HOH . D 3 HOH A 56 356 71 HOH HOH . D 3 HOH A 57 357 30 HOH HOH . D 3 HOH A 58 358 109 HOH HOH . D 3 HOH A 59 359 4 HOH HOH . D 3 HOH A 60 360 260 HOH HOH . D 3 HOH A 61 361 106 HOH HOH . D 3 HOH A 62 362 206 HOH HOH . D 3 HOH A 63 363 249 HOH HOH . D 3 HOH A 64 364 267 HOH HOH . D 3 HOH A 65 365 140 HOH HOH . D 3 HOH A 66 366 3 HOH HOH . D 3 HOH A 67 367 68 HOH HOH . D 3 HOH A 68 368 22 HOH HOH . D 3 HOH A 69 369 8 HOH HOH . D 3 HOH A 70 370 274 HOH HOH . D 3 HOH A 71 371 100 HOH HOH . D 3 HOH A 72 372 15 HOH HOH . D 3 HOH A 73 373 116 HOH HOH . D 3 HOH A 74 374 42 HOH HOH . D 3 HOH A 75 375 36 HOH HOH . D 3 HOH A 76 376 268 HOH HOH . D 3 HOH A 77 377 1 HOH HOH . D 3 HOH A 78 378 156 HOH HOH . D 3 HOH A 79 379 54 HOH HOH . D 3 HOH A 80 380 89 HOH HOH . D 3 HOH A 81 381 69 HOH HOH . D 3 HOH A 82 382 47 HOH HOH . D 3 HOH A 83 383 37 HOH HOH . D 3 HOH A 84 384 275 HOH HOH . D 3 HOH A 85 385 189 HOH HOH . D 3 HOH A 86 386 157 HOH HOH . D 3 HOH A 87 387 171 HOH HOH . D 3 HOH A 88 388 67 HOH HOH . D 3 HOH A 89 389 95 HOH HOH . D 3 HOH A 90 390 112 HOH HOH . D 3 HOH A 91 391 91 HOH HOH . D 3 HOH A 92 392 52 HOH HOH . D 3 HOH A 93 393 60 HOH HOH . D 3 HOH A 94 394 184 HOH HOH . D 3 HOH A 95 395 27 HOH HOH . D 3 HOH A 96 396 35 HOH HOH . D 3 HOH A 97 397 66 HOH HOH . D 3 HOH A 98 398 253 HOH HOH . D 3 HOH A 99 399 208 HOH HOH . D 3 HOH A 100 400 78 HOH HOH . D 3 HOH A 101 401 154 HOH HOH . D 3 HOH A 102 402 43 HOH HOH . D 3 HOH A 103 403 234 HOH HOH . D 3 HOH A 104 404 190 HOH HOH . D 3 HOH A 105 405 130 HOH HOH . D 3 HOH A 106 406 212 HOH HOH . D 3 HOH A 107 407 97 HOH HOH . D 3 HOH A 108 408 214 HOH HOH . D 3 HOH A 109 409 155 HOH HOH . D 3 HOH A 110 410 216 HOH HOH . D 3 HOH A 111 411 132 HOH HOH . D 3 HOH A 112 412 225 HOH HOH . D 3 HOH A 113 413 94 HOH HOH . D 3 HOH A 114 414 229 HOH HOH . D 3 HOH A 115 415 193 HOH HOH . D 3 HOH A 116 416 271 HOH HOH . D 3 HOH A 117 417 90 HOH HOH . D 3 HOH A 118 418 77 HOH HOH . D 3 HOH A 119 419 179 HOH HOH . D 3 HOH A 120 420 248 HOH HOH . D 3 HOH A 121 421 158 HOH HOH . D 3 HOH A 122 422 166 HOH HOH . D 3 HOH A 123 423 86 HOH HOH . D 3 HOH A 124 424 34 HOH HOH . D 3 HOH A 125 425 133 HOH HOH . D 3 HOH A 126 426 118 HOH HOH . D 3 HOH A 127 427 263 HOH HOH . D 3 HOH A 128 428 160 HOH HOH . D 3 HOH A 129 429 215 HOH HOH . D 3 HOH A 130 430 107 HOH HOH . D 3 HOH A 131 431 282 HOH HOH . D 3 HOH A 132 432 201 HOH HOH . D 3 HOH A 133 433 163 HOH HOH . D 3 HOH A 134 434 172 HOH HOH . D 3 HOH A 135 435 185 HOH HOH . D 3 HOH A 136 436 244 HOH HOH . D 3 HOH A 137 437 159 HOH HOH . D 3 HOH A 138 438 261 HOH HOH . D 3 HOH A 139 439 105 HOH HOH . D 3 HOH A 140 440 76 HOH HOH . D 3 HOH A 141 441 236 HOH HOH . D 3 HOH A 142 442 222 HOH HOH . D 3 HOH A 143 443 148 HOH HOH . D 3 HOH A 144 444 127 HOH HOH . D 3 HOH A 145 445 230 HOH HOH . E 3 HOH B 1 401 75 HOH HOH . E 3 HOH B 2 402 231 HOH HOH . E 3 HOH B 3 403 262 HOH HOH . E 3 HOH B 4 404 57 HOH HOH . E 3 HOH B 5 405 187 HOH HOH . E 3 HOH B 6 406 20 HOH HOH . E 3 HOH B 7 407 278 HOH HOH . E 3 HOH B 8 408 103 HOH HOH . E 3 HOH B 9 409 286 HOH HOH . E 3 HOH B 10 410 80 HOH HOH . E 3 HOH B 11 411 254 HOH HOH . E 3 HOH B 12 412 55 HOH HOH . E 3 HOH B 13 413 56 HOH HOH . E 3 HOH B 14 414 123 HOH HOH . E 3 HOH B 15 415 195 HOH HOH . E 3 HOH B 16 416 150 HOH HOH . E 3 HOH B 17 417 139 HOH HOH . E 3 HOH B 18 418 174 HOH HOH . E 3 HOH B 19 419 23 HOH HOH . E 3 HOH B 20 420 198 HOH HOH . E 3 HOH B 21 421 281 HOH HOH . E 3 HOH B 22 422 165 HOH HOH . E 3 HOH B 23 423 17 HOH HOH . E 3 HOH B 24 424 124 HOH HOH . E 3 HOH B 25 425 82 HOH HOH . E 3 HOH B 26 426 210 HOH HOH . E 3 HOH B 27 427 25 HOH HOH . E 3 HOH B 28 428 14 HOH HOH . E 3 HOH B 29 429 269 HOH HOH . E 3 HOH B 30 430 188 HOH HOH . E 3 HOH B 31 431 2 HOH HOH . E 3 HOH B 32 432 65 HOH HOH . E 3 HOH B 33 433 175 HOH HOH . E 3 HOH B 34 434 135 HOH HOH . E 3 HOH B 35 435 182 HOH HOH . E 3 HOH B 36 436 32 HOH HOH . E 3 HOH B 37 437 128 HOH HOH . E 3 HOH B 38 438 141 HOH HOH . E 3 HOH B 39 439 126 HOH HOH . E 3 HOH B 40 440 81 HOH HOH . E 3 HOH B 41 441 92 HOH HOH . E 3 HOH B 42 442 62 HOH HOH . E 3 HOH B 43 443 46 HOH HOH . E 3 HOH B 44 444 173 HOH HOH . E 3 HOH B 45 445 44 HOH HOH . E 3 HOH B 46 446 26 HOH HOH . E 3 HOH B 47 447 241 HOH HOH . E 3 HOH B 48 448 40 HOH HOH . E 3 HOH B 49 449 53 HOH HOH . E 3 HOH B 50 450 120 HOH HOH . E 3 HOH B 51 451 108 HOH HOH . E 3 HOH B 52 452 19 HOH HOH . E 3 HOH B 53 453 101 HOH HOH . E 3 HOH B 54 454 88 HOH HOH . E 3 HOH B 55 455 197 HOH HOH . E 3 HOH B 56 456 39 HOH HOH . E 3 HOH B 57 457 151 HOH HOH . E 3 HOH B 58 458 245 HOH HOH . E 3 HOH B 59 459 220 HOH HOH . E 3 HOH B 60 460 93 HOH HOH . E 3 HOH B 61 461 161 HOH HOH . E 3 HOH B 62 462 122 HOH HOH . E 3 HOH B 63 463 73 HOH HOH . E 3 HOH B 64 464 87 HOH HOH . E 3 HOH B 65 465 70 HOH HOH . E 3 HOH B 66 466 119 HOH HOH . E 3 HOH B 67 467 168 HOH HOH . E 3 HOH B 68 468 204 HOH HOH . E 3 HOH B 69 469 58 HOH HOH . E 3 HOH B 70 470 280 HOH HOH . E 3 HOH B 71 471 177 HOH HOH . E 3 HOH B 72 472 45 HOH HOH . E 3 HOH B 73 473 129 HOH HOH . E 3 HOH B 74 474 266 HOH HOH . E 3 HOH B 75 475 28 HOH HOH . E 3 HOH B 76 476 143 HOH HOH . E 3 HOH B 77 477 196 HOH HOH . E 3 HOH B 78 478 218 HOH HOH . E 3 HOH B 79 479 102 HOH HOH . E 3 HOH B 80 480 64 HOH HOH . E 3 HOH B 81 481 72 HOH HOH . E 3 HOH B 82 482 164 HOH HOH . E 3 HOH B 83 483 113 HOH HOH . E 3 HOH B 84 484 194 HOH HOH . E 3 HOH B 85 485 255 HOH HOH . E 3 HOH B 86 486 272 HOH HOH . E 3 HOH B 87 487 227 HOH HOH . E 3 HOH B 88 488 265 HOH HOH . E 3 HOH B 89 489 192 HOH HOH . E 3 HOH B 90 490 199 HOH HOH . E 3 HOH B 91 491 146 HOH HOH . E 3 HOH B 92 492 59 HOH HOH . E 3 HOH B 93 493 240 HOH HOH . E 3 HOH B 94 494 167 HOH HOH . E 3 HOH B 95 495 145 HOH HOH . E 3 HOH B 96 496 217 HOH HOH . E 3 HOH B 97 497 224 HOH HOH . E 3 HOH B 98 498 284 HOH HOH . E 3 HOH B 99 499 205 HOH HOH . E 3 HOH B 100 500 149 HOH HOH . E 3 HOH B 101 501 283 HOH HOH . E 3 HOH B 102 502 99 HOH HOH . E 3 HOH B 103 503 213 HOH HOH . E 3 HOH B 104 504 63 HOH HOH . E 3 HOH B 105 505 239 HOH HOH . E 3 HOH B 106 506 243 HOH HOH . E 3 HOH B 107 507 238 HOH HOH . E 3 HOH B 108 508 153 HOH HOH . E 3 HOH B 109 509 209 HOH HOH . E 3 HOH B 110 510 38 HOH HOH . E 3 HOH B 111 511 176 HOH HOH . E 3 HOH B 112 512 191 HOH HOH . E 3 HOH B 113 513 257 HOH HOH . E 3 HOH B 114 514 276 HOH HOH . E 3 HOH B 115 515 279 HOH HOH . E 3 HOH B 116 516 251 HOH HOH . E 3 HOH B 117 517 152 HOH HOH . E 3 HOH B 118 518 235 HOH HOH . E 3 HOH B 119 519 138 HOH HOH . E 3 HOH B 120 520 285 HOH HOH . E 3 HOH B 121 521 273 HOH HOH . E 3 HOH B 122 522 50 HOH HOH . E 3 HOH B 123 523 200 HOH HOH . E 3 HOH B 124 524 114 HOH HOH . E 3 HOH B 125 525 211 HOH HOH . E 3 HOH B 126 526 207 HOH HOH . E 3 HOH B 127 527 237 HOH HOH . E 3 HOH B 128 528 131 HOH HOH . E 3 HOH B 129 529 270 HOH HOH . E 3 HOH B 130 530 233 HOH HOH . E 3 HOH B 131 531 246 HOH HOH . E 3 HOH B 132 532 226 HOH HOH . E 3 HOH B 133 533 259 HOH HOH . E 3 HOH B 134 534 256 HOH HOH . E 3 HOH B 135 535 232 HOH HOH . E 3 HOH B 136 536 121 HOH HOH . E 3 HOH B 137 537 264 HOH HOH . E 3 HOH B 138 538 221 HOH HOH . E 3 HOH B 139 539 183 HOH HOH . E 3 HOH B 140 540 125 HOH HOH . E 3 HOH B 141 541 181 HOH HOH . E 3 HOH B 142 542 277 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 JA5 . . . C 2 13.264 86.974 27.04 1 42.61 ? C10 JA5 301 B 1 HETATM 2 C C13 JA5 . . . C 2 11.814 87.431 31.529 1 56.95 ? C13 JA5 301 B 1 HETATM 3 O O01 JA5 . . . C 2 12.1 89.642 21.78 1 44.13 ? O01 JA5 301 B 1 HETATM 4 C C02 JA5 . . . C 2 13.123 88.788 22.109 1 41.29 ? C02 JA5 301 B 1 HETATM 5 C C03 JA5 . . . C 2 13.045 88.613 23.633 1 32.4 ? C03 JA5 301 B 1 HETATM 6 C C04 JA5 . . . C 2 13.379 87.413 24.324 1 38.47 ? C04 JA5 301 B 1 HETATM 7 C C05 JA5 . . . C 2 13.158 87.633 25.84 1 25.78 ? C05 JA5 301 B 1 HETATM 8 C C06 JA5 . . . C 2 12.692 88.951 26.104 1 38.06 ? C06 JA5 301 B 1 HETATM 9 S S07 JA5 . . . C 2 12.556 89.76 24.696 1 50.78 ? S07 JA5 301 B 1 HETATM 10 N N08 JA5 . . . C 2 12.527 89.056 27.479 1 34.4 ? N08 JA5 301 B 1 HETATM 11 C C09 JA5 . . . C 2 12.866 87.889 28.047 1 47.77 ? C09 JA5 301 B 1 HETATM 12 C C11 JA5 . . . C 2 12.85 87.483 29.518 1 53.68 ? C11 JA5 301 B 1 HETATM 13 O O12 JA5 . . . C 2 12.288 88.289 30.492 1 48.47 ? O12 JA5 301 B 1 HETATM 14 O O14 JA5 . . . C 2 13.311 86.41 29.823 1 61.11 ? O14 JA5 301 B 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 623 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 14 #