data_6QP0 # _model_server_result.job_id zAwRb4s-mzzJJZ1PaeHWZA _model_server_result.datetime_utc '2024-10-19 21:22:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qp0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 6QP0 # _exptl.entry_id 6QP0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6QP0 _cell.length_a 71.02 _cell.length_b 71.02 _cell.length_c 88.57 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QP0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 16 A THR 15 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc2 A OD1 ASP 130 A ASP 129 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.868 ? metalc ? metalc3 B O1B ADP . A ADP 501 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc4 D MG MG . A MG 503 1_555 F O HOH . A HOH 918 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 265 n n O1 C6 MES sing 266 n n C2 C3 MES sing 267 n n C2 H21 MES sing 268 n n C2 H22 MES sing 269 n n C3 N4 MES sing 270 n n C3 H31 MES sing 271 n n C3 H32 MES sing 272 n n N4 C5 MES sing 273 n n N4 C7 MES sing 274 n n N4 HN4 MES sing 275 n n C5 C6 MES sing 276 n n C5 H51 MES sing 277 n n C5 H52 MES sing 278 n n C6 H61 MES sing 279 n n C6 H62 MES sing 280 n n C7 C8 MES sing 281 n n C7 H71 MES sing 282 n n C7 H72 MES sing 283 n n C8 S MES sing 284 n n C8 H81 MES sing 285 n n C8 H82 MES sing 286 n n S O1S MES doub 287 n n S O2S MES doub 288 n n S O3S MES sing 289 n n # _atom_sites.entry_id 6QP0 _atom_sites.fract_transf_matrix[1][1] 0.014081 _atom_sites.fract_transf_matrix[1][2] 0.008129 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016259 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 501 501 ADP ADP . C 3 AF3 A 1 502 601 AF3 AF3 . D 4 MG A 1 503 701 MG MG . E 5 MES A 1 504 801 MES MES . F 6 HOH A 1 901 16 HOH HOH . F 6 HOH A 2 902 21 HOH HOH . F 6 HOH A 3 903 19 HOH HOH . F 6 HOH A 4 904 48 HOH HOH . F 6 HOH A 5 905 32 HOH HOH . F 6 HOH A 6 906 35 HOH HOH . F 6 HOH A 7 907 1 HOH HOH . F 6 HOH A 8 908 27 HOH HOH . F 6 HOH A 9 909 5 HOH HOH . F 6 HOH A 10 910 8 HOH HOH . F 6 HOH A 11 911 39 HOH HOH . F 6 HOH A 12 912 43 HOH HOH . F 6 HOH A 13 913 28 HOH HOH . F 6 HOH A 14 914 3 HOH HOH . F 6 HOH A 15 915 4 HOH HOH . F 6 HOH A 16 916 51 HOH HOH . F 6 HOH A 17 917 30 HOH HOH . F 6 HOH A 18 918 29 HOH HOH . F 6 HOH A 19 919 13 HOH HOH . F 6 HOH A 20 920 14 HOH HOH . F 6 HOH A 21 921 15 HOH HOH . F 6 HOH A 22 922 36 HOH HOH . F 6 HOH A 23 923 20 HOH HOH . F 6 HOH A 24 924 45 HOH HOH . F 6 HOH A 25 925 23 HOH HOH . F 6 HOH A 26 926 10 HOH HOH . F 6 HOH A 27 927 40 HOH HOH . F 6 HOH A 28 928 17 HOH HOH . F 6 HOH A 29 929 2 HOH HOH . F 6 HOH A 30 930 6 HOH HOH . F 6 HOH A 31 931 7 HOH HOH . F 6 HOH A 32 932 46 HOH HOH . F 6 HOH A 33 933 52 HOH HOH . F 6 HOH A 34 934 18 HOH HOH . F 6 HOH A 35 935 9 HOH HOH . F 6 HOH A 36 936 12 HOH HOH . F 6 HOH A 37 937 49 HOH HOH . F 6 HOH A 38 938 34 HOH HOH . F 6 HOH A 39 939 11 HOH HOH . F 6 HOH A 40 940 53 HOH HOH . F 6 HOH A 41 941 47 HOH HOH . F 6 HOH A 42 942 38 HOH HOH . F 6 HOH A 43 943 44 HOH HOH . F 6 HOH A 44 944 31 HOH HOH . F 6 HOH A 45 945 42 HOH HOH . F 6 HOH A 46 946 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . E 5 3.333 50.919 50.881 1 35.18 ? O1 MES 504 A 1 HETATM 2 C C2 MES . . . E 5 2.194 50.522 51.635 1 35.45 ? C2 MES 504 A 1 HETATM 3 C C3 MES . . . E 5 1.212 51.674 51.761 1 35.71 ? C3 MES 504 A 1 HETATM 4 N N4 MES . . . E 5 1.891 52.846 52.344 1 36.46 ? N4 MES 504 A 1 HETATM 5 C C5 MES . . . E 5 3.044 53.248 51.567 1 35.52 ? C5 MES 504 A 1 HETATM 6 C C6 MES . . . E 5 3.981 52.04 51.475 1 34.78 ? C6 MES 504 A 1 HETATM 7 C C7 MES . . . E 5 0.86 53.815 52.751 1 40.99 ? C7 MES 504 A 1 HETATM 8 C C8 MES . . . E 5 1.382 55.248 52.825 1 43.9 ? C8 MES 504 A 1 HETATM 9 S S MES . . . E 5 0.732 56.104 54.108 1 45.24 ? S MES 504 A 1 HETATM 10 O O1S MES . . . E 5 1.855 56.615 54.922 1 43.75 ? O1S MES 504 A 1 HETATM 11 O O2S MES . . . E 5 -0.033 57.26 53.587 1 47.36 ? O2S MES 504 A 1 HETATM 12 O O3S MES . . . E 5 -0.161 55.267 54.943 1 45.51 ? O3S MES 504 A 1 HETATM 13 H H21 MES . . . E 5 2.508 50.199 52.63 1 42.55 ? H21 MES 504 A 1 HETATM 14 H H22 MES . . . E 5 1.707 49.677 51.145 1 42.55 ? H22 MES 504 A 1 HETATM 15 H H31 MES . . . E 5 0.813 51.929 50.777 1 42.86 ? H31 MES 504 A 1 HETATM 16 H H32 MES . . . E 5 0.374 51.377 52.396 1 42.86 ? H32 MES 504 A 1 HETATM 17 H HN4 MES . . . E 5 2.372 52.66 53.212 1 43.76 ? HN4 MES 504 A 1 HETATM 18 H H51 MES . . . E 5 3.552 54.088 52.046 1 42.63 ? H51 MES 504 A 1 HETATM 19 H H52 MES . . . E 5 2.736 53.567 50.568 1 42.63 ? H52 MES 504 A 1 HETATM 20 H H61 MES . . . E 5 4.858 52.306 50.882 1 41.74 ? H61 MES 504 A 1 HETATM 21 H H62 MES . . . E 5 4.322 51.771 52.477 1 41.74 ? H62 MES 504 A 1 HETATM 22 H H71 MES . . . E 5 0.035 53.775 52.037 1 49.2 ? H71 MES 504 A 1 HETATM 23 H H72 MES . . . E 5 0.471 53.528 53.73 1 49.2 ? H72 MES 504 A 1 HETATM 24 H H81 MES . . . E 5 2.469 55.226 52.926 1 52.69 ? H81 MES 504 A 1 HETATM 25 H H82 MES . . . E 5 1.142 55.763 51.893 1 52.69 ? H82 MES 504 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 25 #