data_6QP4 # _model_server_result.job_id 4_VkI8-rNvGZEUs3Pkp19g _model_server_result.datetime_utc '2024-10-19 20:26:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qp4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":507}' # _entry.id 6QP4 # _exptl.entry_id 6QP4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE-1,6-DIOL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.07 _cell.angle_gamma 90 _cell.entry_id 6QP4 _cell.length_a 63.639 _cell.length_b 44.565 _cell.length_c 128.436 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QP4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 17 A GLN 315 1_555 J ZN ZN . A ZN 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc2 J ZN ZN . A ZN 507 1_555 V O HOH . A HOH 602 2_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc3 J ZN ZN . A ZN 507 1_555 V O HOH . A HOH 626 2_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc4 J ZN ZN . A ZN 507 2_746 B OE1 GLN 17 B GLN 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc5 J ZN ZN . A ZN 507 1_555 X O HOH . C HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id HEZ _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE-1,6-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HEZ sing 116 n n O1 HO1 HEZ sing 117 n n C1 C2 HEZ sing 118 n n C1 H11 HEZ sing 119 n n C1 H12 HEZ sing 120 n n C2 C3 HEZ sing 121 n n C2 H21 HEZ sing 122 n n C2 H22 HEZ sing 123 n n C3 C4 HEZ sing 124 n n C3 H31 HEZ sing 125 n n C3 H32 HEZ sing 126 n n C4 C5 HEZ sing 127 n n C4 H41 HEZ sing 128 n n C4 H42 HEZ sing 129 n n C5 C6 HEZ sing 130 n n C5 H51 HEZ sing 131 n n C5 H52 HEZ sing 132 n n C6 O6 HEZ sing 133 n n C6 H61 HEZ sing 134 n n C6 H62 HEZ sing 135 n n O6 HO6 HEZ sing 136 n n # _atom_sites.entry_id 6QP4 _atom_sites.fract_transf_matrix[1][1] 0.015714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000567 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022439 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CL A 1 501 1 CL CL . E 2 CL A 1 502 2 CL CL . F 2 CL A 1 503 3 CL CL . G 3 HEZ A 1 504 1 HEZ HEZ . H 3 HEZ A 1 505 4 HEZ HEZ . I 3 HEZ A 1 506 7 HEZ HEZ . J 4 ZN A 1 507 1 ZN ZN . K 2 CL B 1 501 4 CL CL . L 3 HEZ B 1 502 6 HEZ HEZ . M 3 HEZ B 1 503 12 HEZ HEZ . N 3 HEZ C 1 501 2 HEZ HEZ . O 3 HEZ C 1 502 3 HEZ HEZ . P 3 HEZ C 1 503 5 HEZ HEZ . Q 3 HEZ C 1 504 8 HEZ HEZ . R 3 HEZ C 1 505 9 HEZ HEZ . S 3 HEZ C 1 506 10 HEZ HEZ . T 3 HEZ C 1 507 11 HEZ HEZ . U 4 ZN C 1 508 2 ZN ZN . V 5 HOH A 1 601 76 HOH HOH . V 5 HOH A 2 602 177 HOH HOH . V 5 HOH A 3 603 122 HOH HOH . V 5 HOH A 4 604 161 HOH HOH . V 5 HOH A 5 605 12 HOH HOH . V 5 HOH A 6 606 173 HOH HOH . V 5 HOH A 7 607 20 HOH HOH . V 5 HOH A 8 608 6 HOH HOH . V 5 HOH A 9 609 192 HOH HOH . V 5 HOH A 10 610 137 HOH HOH . V 5 HOH A 11 611 11 HOH HOH . V 5 HOH A 12 612 158 HOH HOH . V 5 HOH A 13 613 174 HOH HOH . V 5 HOH A 14 614 163 HOH HOH . V 5 HOH A 15 615 184 HOH HOH . V 5 HOH A 16 616 74 HOH HOH . V 5 HOH A 17 617 193 HOH HOH . V 5 HOH A 18 618 53 HOH HOH . V 5 HOH A 19 619 52 HOH HOH . V 5 HOH A 20 620 144 HOH HOH . V 5 HOH A 21 621 105 HOH HOH . V 5 HOH A 22 622 82 HOH HOH . V 5 HOH A 23 623 16 HOH HOH . V 5 HOH A 24 624 79 HOH HOH . V 5 HOH A 25 625 164 HOH HOH . V 5 HOH A 26 626 175 HOH HOH . V 5 HOH A 27 627 190 HOH HOH . V 5 HOH A 28 628 121 HOH HOH . V 5 HOH A 29 629 145 HOH HOH . V 5 HOH A 30 630 66 HOH HOH . V 5 HOH A 31 631 123 HOH HOH . V 5 HOH A 32 632 90 HOH HOH . V 5 HOH A 33 633 13 HOH HOH . V 5 HOH A 34 634 97 HOH HOH . V 5 HOH A 35 635 143 HOH HOH . V 5 HOH A 36 636 188 HOH HOH . V 5 HOH A 37 637 148 HOH HOH . V 5 HOH A 38 638 9 HOH HOH . V 5 HOH A 39 639 130 HOH HOH . V 5 HOH A 40 640 77 HOH HOH . V 5 HOH A 41 641 14 HOH HOH . V 5 HOH A 42 642 81 HOH HOH . V 5 HOH A 43 643 57 HOH HOH . V 5 HOH A 44 644 1 HOH HOH . V 5 HOH A 45 645 4 HOH HOH . V 5 HOH A 46 646 50 HOH HOH . V 5 HOH A 47 647 197 HOH HOH . V 5 HOH A 48 648 126 HOH HOH . V 5 HOH A 49 649 86 HOH HOH . V 5 HOH A 50 650 147 HOH HOH . V 5 HOH A 51 651 157 HOH HOH . V 5 HOH A 52 652 85 HOH HOH . V 5 HOH A 53 653 10 HOH HOH . V 5 HOH A 54 654 15 HOH HOH . V 5 HOH A 55 655 146 HOH HOH . V 5 HOH A 56 656 182 HOH HOH . V 5 HOH A 57 657 194 HOH HOH . V 5 HOH A 58 658 156 HOH HOH . V 5 HOH A 59 659 73 HOH HOH . V 5 HOH A 60 660 120 HOH HOH . V 5 HOH A 61 661 55 HOH HOH . V 5 HOH A 62 662 56 HOH HOH . V 5 HOH A 63 663 78 HOH HOH . V 5 HOH A 64 664 115 HOH HOH . W 5 HOH B 1 601 3 HOH HOH . W 5 HOH B 2 602 51 HOH HOH . W 5 HOH B 3 603 167 HOH HOH . W 5 HOH B 4 604 199 HOH HOH . W 5 HOH B 5 605 26 HOH HOH . W 5 HOH B 6 606 32 HOH HOH . W 5 HOH B 7 607 117 HOH HOH . W 5 HOH B 8 608 70 HOH HOH . W 5 HOH B 9 609 109 HOH HOH . W 5 HOH B 10 610 23 HOH HOH . W 5 HOH B 11 611 38 HOH HOH . W 5 HOH B 12 612 166 HOH HOH . W 5 HOH B 13 613 37 HOH HOH . W 5 HOH B 14 614 180 HOH HOH . W 5 HOH B 15 615 63 HOH HOH . W 5 HOH B 16 616 27 HOH HOH . W 5 HOH B 17 617 92 HOH HOH . W 5 HOH B 18 618 198 HOH HOH . W 5 HOH B 19 619 165 HOH HOH . W 5 HOH B 20 620 45 HOH HOH . W 5 HOH B 21 621 189 HOH HOH . W 5 HOH B 22 622 168 HOH HOH . W 5 HOH B 23 623 5 HOH HOH . W 5 HOH B 24 624 34 HOH HOH . W 5 HOH B 25 625 28 HOH HOH . W 5 HOH B 26 626 19 HOH HOH . W 5 HOH B 27 627 54 HOH HOH . W 5 HOH B 28 628 131 HOH HOH . W 5 HOH B 29 629 25 HOH HOH . W 5 HOH B 30 630 59 HOH HOH . W 5 HOH B 31 631 30 HOH HOH . W 5 HOH B 32 632 62 HOH HOH . W 5 HOH B 33 633 170 HOH HOH . W 5 HOH B 34 634 58 HOH HOH . W 5 HOH B 35 635 31 HOH HOH . W 5 HOH B 36 636 107 HOH HOH . W 5 HOH B 37 637 104 HOH HOH . W 5 HOH B 38 638 152 HOH HOH . W 5 HOH B 39 639 93 HOH HOH . W 5 HOH B 40 640 80 HOH HOH . W 5 HOH B 41 641 101 HOH HOH . W 5 HOH B 42 642 111 HOH HOH . W 5 HOH B 43 643 61 HOH HOH . W 5 HOH B 44 644 35 HOH HOH . W 5 HOH B 45 645 119 HOH HOH . W 5 HOH B 46 646 95 HOH HOH . W 5 HOH B 47 647 18 HOH HOH . W 5 HOH B 48 648 98 HOH HOH . W 5 HOH B 49 649 99 HOH HOH . W 5 HOH B 50 650 153 HOH HOH . W 5 HOH B 51 651 100 HOH HOH . W 5 HOH B 52 652 155 HOH HOH . W 5 HOH B 53 653 22 HOH HOH . W 5 HOH B 54 654 149 HOH HOH . W 5 HOH B 55 655 91 HOH HOH . W 5 HOH B 56 656 129 HOH HOH . W 5 HOH B 57 657 72 HOH HOH . W 5 HOH B 58 658 64 HOH HOH . W 5 HOH B 59 659 132 HOH HOH . W 5 HOH B 60 660 17 HOH HOH . W 5 HOH B 61 661 36 HOH HOH . W 5 HOH B 62 662 154 HOH HOH . W 5 HOH B 63 663 127 HOH HOH . W 5 HOH B 64 664 110 HOH HOH . W 5 HOH B 65 665 60 HOH HOH . W 5 HOH B 66 666 128 HOH HOH . X 5 HOH C 1 601 113 HOH HOH . X 5 HOH C 2 602 187 HOH HOH . X 5 HOH C 3 603 103 HOH HOH . X 5 HOH C 4 604 183 HOH HOH . X 5 HOH C 5 605 195 HOH HOH . X 5 HOH C 6 606 134 HOH HOH . X 5 HOH C 7 607 112 HOH HOH . X 5 HOH C 8 608 49 HOH HOH . X 5 HOH C 9 609 84 HOH HOH . X 5 HOH C 10 610 136 HOH HOH . X 5 HOH C 11 611 139 HOH HOH . X 5 HOH C 12 612 142 HOH HOH . X 5 HOH C 13 613 178 HOH HOH . X 5 HOH C 14 614 181 HOH HOH . X 5 HOH C 15 615 160 HOH HOH . X 5 HOH C 16 616 169 HOH HOH . X 5 HOH C 17 617 89 HOH HOH . X 5 HOH C 18 618 7 HOH HOH . X 5 HOH C 19 619 44 HOH HOH . X 5 HOH C 20 620 179 HOH HOH . X 5 HOH C 21 621 138 HOH HOH . X 5 HOH C 22 622 186 HOH HOH . X 5 HOH C 23 623 171 HOH HOH . X 5 HOH C 24 624 141 HOH HOH . X 5 HOH C 25 625 40 HOH HOH . X 5 HOH C 26 626 65 HOH HOH . X 5 HOH C 27 627 71 HOH HOH . X 5 HOH C 28 628 24 HOH HOH . X 5 HOH C 29 629 33 HOH HOH . X 5 HOH C 30 630 133 HOH HOH . X 5 HOH C 31 631 114 HOH HOH . X 5 HOH C 32 632 68 HOH HOH . X 5 HOH C 33 633 172 HOH HOH . X 5 HOH C 34 634 125 HOH HOH . X 5 HOH C 35 635 47 HOH HOH . X 5 HOH C 36 636 75 HOH HOH . X 5 HOH C 37 637 46 HOH HOH . X 5 HOH C 38 638 8 HOH HOH . X 5 HOH C 39 639 21 HOH HOH . X 5 HOH C 40 640 87 HOH HOH . X 5 HOH C 41 641 42 HOH HOH . X 5 HOH C 42 642 102 HOH HOH . X 5 HOH C 43 643 176 HOH HOH . X 5 HOH C 44 644 185 HOH HOH . X 5 HOH C 45 645 118 HOH HOH . X 5 HOH C 46 646 43 HOH HOH . X 5 HOH C 47 647 88 HOH HOH . X 5 HOH C 48 648 162 HOH HOH . X 5 HOH C 49 649 2 HOH HOH . X 5 HOH C 50 650 67 HOH HOH . X 5 HOH C 51 651 48 HOH HOH . X 5 HOH C 52 652 124 HOH HOH . X 5 HOH C 53 653 151 HOH HOH . X 5 HOH C 54 654 106 HOH HOH . X 5 HOH C 55 655 159 HOH HOH . X 5 HOH C 56 656 83 HOH HOH . X 5 HOH C 57 657 39 HOH HOH . X 5 HOH C 58 658 29 HOH HOH . X 5 HOH C 59 659 196 HOH HOH . X 5 HOH C 60 660 116 HOH HOH . X 5 HOH C 61 661 96 HOH HOH . X 5 HOH C 62 662 150 HOH HOH . X 5 HOH C 63 663 191 HOH HOH . X 5 HOH C 64 664 135 HOH HOH . X 5 HOH C 65 665 108 HOH HOH . X 5 HOH C 66 666 41 HOH HOH . X 5 HOH C 67 667 69 HOH HOH . X 5 HOH C 68 668 140 HOH HOH . X 5 HOH C 69 669 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HEZ . . . T 3 64.346 1.809 74.287 1 68.78 ? O1 HEZ 507 C 1 HETATM 2 C C1 HEZ . . . T 3 64.599 0.65 73.561 1 59.21 ? C1 HEZ 507 C 1 HETATM 3 C C2 HEZ . . . T 3 65.95 0.265 74.138 1 72.79 ? C2 HEZ 507 C 1 HETATM 4 C C3 HEZ . . . T 3 65.906 -0.761 75.286 1 76.06 ? C3 HEZ 507 C 1 HETATM 5 C C4 HEZ . . . T 3 67.358 -1.086 75.712 1 81.26 ? C4 HEZ 507 C 1 HETATM 6 C C5 HEZ . . . T 3 67.481 -2.407 76.473 1 76.26 ? C5 HEZ 507 C 1 HETATM 7 C C6 HEZ . . . T 3 66.534 -2.397 77.683 1 80.74 ? C6 HEZ 507 C 1 HETATM 8 O O6 HEZ . . . T 3 66.503 -1.154 78.341 1 74.9 ? O6 HEZ 507 C 1 HETATM 9 H HO1 HEZ . . . T 3 63.816 2.309 73.849 1 82.5 ? HO1 HEZ 507 C 1 HETATM 10 H H11 HEZ . . . T 3 63.929 -0.031 73.726 1 71.02 ? H11 HEZ 507 C 1 HETATM 11 H H12 HEZ . . . T 3 64.651 0.827 72.608 1 71.02 ? H12 HEZ 507 C 1 HETATM 12 H H21 HEZ . . . T 3 66.374 1.071 74.472 1 87.32 ? H21 HEZ 507 C 1 HETATM 13 H H22 HEZ . . . T 3 66.487 -0.109 73.422 1 87.32 ? H22 HEZ 507 C 1 HETATM 14 H H31 HEZ . . . T 3 65.42 -0.389 76.038 1 91.25 ? H31 HEZ 507 C 1 HETATM 15 H H32 HEZ . . . T 3 65.464 -1.57 74.984 1 91.25 ? H32 HEZ 507 C 1 HETATM 16 H H41 HEZ . . . T 3 67.679 -0.371 76.282 1 97.49 ? H41 HEZ 507 C 1 HETATM 17 H H42 HEZ . . . T 3 67.908 -1.137 74.915 1 97.49 ? H42 HEZ 507 C 1 HETATM 18 H H51 HEZ . . . T 3 68.395 -2.519 76.779 1 91.48 ? H51 HEZ 507 C 1 HETATM 19 H H52 HEZ . . . T 3 67.246 -3.142 75.885 1 91.48 ? H52 HEZ 507 C 1 HETATM 20 H H61 HEZ . . . T 3 66.829 -3.073 78.313 1 96.86 ? H61 HEZ 507 C 1 HETATM 21 H H62 HEZ . . . T 3 65.638 -2.609 77.377 1 96.86 ? H62 HEZ 507 C 1 HETATM 22 H HO6 HEZ . . . T 3 66.297 -1.27 79.157 1 89.85 ? HO6 HEZ 507 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #