data_6QQ6 # _model_server_result.job_id zHx3YWDk8rfaHJiVlBm_rA _model_server_result.datetime_utc '2024-11-04 22:35:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qq6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":808}' # _entry.id 6QQ6 # _exptl.entry_id 6QQ6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QQ6 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QQ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 N N N ? 6 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 76 A GLY 76 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc2 A OH TYR 78 A TYR 78 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc3 A NE2 HIS 331 A HIS 331 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc4 A OE1 GLU 407 A GLU 407 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.018 ? metalc ? metalc5 A OE2 GLU 407 A GLU 407 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc6 A ND1 HIS 486 A HIS 486 1_555 E FE FE . A FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc7 A NE2 HIS 537 A HIS 537 1_555 E FE FE . A FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc8 A NE2 HIS 538 A HIS 538 1_555 E FE FE . A FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc9 A NE2 HIS 629 A HIS 629 1_555 D FE HEM . A HEM 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? metalc ? metalc10 A NE2 HIS 631 A HIS 631 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc11 C O1D HEM . A HEM 801 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc12 C O2D HEM . A HEM 801 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc13 D O1A HEM . A HEM 802 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc14 D O2A HEM . A HEM 802 1_555 F CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.019 ? metalc ? metalc15 D FE HEM . A HEM 802 1_555 P O HOH . A HOH 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc16 E FE FE . A FE 803 1_555 P O HOH . A HOH 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc17 B O GLY 76 B GLY 76 1_555 K CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc18 B OH TYR 78 B TYR 78 1_555 K CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc19 B NE2 HIS 331 B HIS 331 1_555 H FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? metalc ? metalc20 B OE1 GLU 407 B GLU 407 1_555 K CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.009 ? metalc ? metalc21 B OE2 GLU 407 B GLU 407 1_555 K CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc22 B ND1 HIS 486 B HIS 486 1_555 J FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc23 B NE2 HIS 537 B HIS 537 1_555 J FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc24 B NE2 HIS 538 B HIS 538 1_555 J FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc25 B NE2 HIS 629 B HIS 629 1_555 I FE HEM . B HEM 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc26 B NE2 HIS 631 B HIS 631 1_555 H FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc27 H O1D HEM . B HEM 801 1_555 K CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc28 H O2D HEM . B HEM 801 1_555 K CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc29 I O1A HEM . B HEM 802 1_555 K CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc30 I O2A HEM . B HEM 802 1_555 K CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.013 ? metalc ? metalc31 I FE HEM . B HEM 802 1_555 Q O HOH . B HOH 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc32 J FE FE . B FE 803 1_555 Q O HOH . B HOH 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 276 n n C1B O1B LMT sing 277 n n C1B O5B LMT sing 278 n n C1B H1B LMT sing 279 n n C2B C3B LMT sing 280 n n C2B O2B LMT sing 281 n n C2B H2B LMT sing 282 n n C3B C4B LMT sing 283 n n C3B O3B LMT sing 284 n n C3B H3B LMT sing 285 n n C4B C5B LMT sing 286 n n C4B O4' LMT sing 287 n n C4B H4B LMT sing 288 n n C5B C6B LMT sing 289 n n C5B O5B LMT sing 290 n n C5B H5B LMT sing 291 n n C6B O6B LMT sing 292 n n C6B "H6'2" LMT sing 293 n n C6B "H6'1" LMT sing 294 n n O1B C4' LMT sing 295 n n O2B H2O1 LMT sing 296 n n O3B H3O1 LMT sing 297 n n O4' H4O1 LMT sing 298 n n O6B H6B LMT sing 299 n n C1' C2' LMT sing 300 n n C1' O1' LMT sing 301 n n C1' O5' LMT sing 302 n n C1' H1' LMT sing 303 n n C2' C3' LMT sing 304 n n C2' O2' LMT sing 305 n n C2' H2' LMT sing 306 n n C3' C4' LMT sing 307 n n C3' O3' LMT sing 308 n n C3' H3' LMT sing 309 n n C4' C5' LMT sing 310 n n C4' H4' LMT sing 311 n n C5' C6' LMT sing 312 n n C5' O5' LMT sing 313 n n C5' H5' LMT sing 314 n n C6' O6' LMT sing 315 n n C6' H6D LMT sing 316 n n C6' H6E LMT sing 317 n n O1' C1 LMT sing 318 n n O2' H2O2 LMT sing 319 n n O3' H3O2 LMT sing 320 n n O6' H6' LMT sing 321 n n C1 C2 LMT sing 322 n n C1 H12 LMT sing 323 n n C1 H11 LMT sing 324 n n C2 C3 LMT sing 325 n n C2 H22 LMT sing 326 n n C2 H21 LMT sing 327 n n C3 C4 LMT sing 328 n n C3 H32 LMT sing 329 n n C3 H31 LMT sing 330 n n C4 C5 LMT sing 331 n n C4 H42 LMT sing 332 n n C4 H41 LMT sing 333 n n C5 C6 LMT sing 334 n n C5 H52 LMT sing 335 n n C5 H51 LMT sing 336 n n C6 C7 LMT sing 337 n n C6 H62 LMT sing 338 n n C6 H61 LMT sing 339 n n C7 C8 LMT sing 340 n n C7 H72 LMT sing 341 n n C7 H71 LMT sing 342 n n C8 C9 LMT sing 343 n n C8 H82 LMT sing 344 n n C8 H81 LMT sing 345 n n C9 C10 LMT sing 346 n n C9 H92 LMT sing 347 n n C9 H91 LMT sing 348 n n C10 C11 LMT sing 349 n n C10 H102 LMT sing 350 n n C10 H101 LMT sing 351 n n C11 C12 LMT sing 352 n n C11 H112 LMT sing 353 n n C11 H111 LMT sing 354 n n C12 H123 LMT sing 355 n n C12 H122 LMT sing 356 n n C12 H121 LMT sing 357 n n # _atom_sites.entry_id 6QQ6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 801 744 HEM HEM . D 2 HEM A 1 802 745 HEM HEM . E 3 FE A 1 803 746 FE FE . F 4 CA A 1 804 747 CA CA . G 5 LOP A 1 805 3 LOP LOP . H 2 HEM B 1 801 744 HEM HEM . I 2 HEM B 1 802 745 HEM HEM . J 3 FE B 1 803 746 FE FE . K 4 CA B 1 804 747 CA CA . L 5 LOP B 1 805 1 LOP LOP . M 5 LOP B 1 806 2 LOP LOP . N 6 LMT B 1 807 4 LMT LMT . O 6 LMT B 1 808 5 LMT LMT . P 7 HOH A 1 901 15 HOH HOH . P 7 HOH A 2 902 18 HOH HOH . P 7 HOH A 3 903 10 HOH HOH . P 7 HOH A 4 904 11 HOH HOH . P 7 HOH A 5 905 3 HOH HOH . P 7 HOH A 6 906 2 HOH HOH . P 7 HOH A 7 907 14 HOH HOH . P 7 HOH A 8 908 1 HOH HOH . P 7 HOH A 9 909 16 HOH HOH . Q 7 HOH B 1 901 6 HOH HOH . Q 7 HOH B 2 902 17 HOH HOH . Q 7 HOH B 3 903 12 HOH HOH . Q 7 HOH B 4 904 8 HOH HOH . Q 7 HOH B 5 905 7 HOH HOH . Q 7 HOH B 6 906 9 HOH HOH . Q 7 HOH B 7 907 13 HOH HOH . Q 7 HOH B 8 908 5 HOH HOH . Q 7 HOH B 9 909 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . O 6 105.214 110.656 78.415 1 35.61 ? C1B LMT 808 B 1 HETATM 2 C C2B LMT . . . O 6 106.057 110.307 77.2 1 35.61 ? C2B LMT 808 B 1 HETATM 3 C C3B LMT . . . O 6 105.474 110.91 75.976 1 35.61 ? C3B LMT 808 B 1 HETATM 4 C C4B LMT . . . O 6 105.339 112.406 76.044 1 35.61 ? C4B LMT 808 B 1 HETATM 5 C C5B LMT . . . O 6 104.832 112.98 77.382 1 35.61 ? C5B LMT 808 B 1 HETATM 6 C C6B LMT . . . O 6 103.383 113.356 77.242 1 35.61 ? C6B LMT 808 B 1 HETATM 7 O O1B LMT . . . O 6 105.847 110.191 79.55 1 35.61 ? O1B LMT 808 B 1 HETATM 8 O O2B LMT . . . O 6 107.405 110.792 77.38 1 35.61 ? O2B LMT 808 B 1 HETATM 9 O O3B LMT . . . O 6 104.161 110.319 75.751 1 35.61 ? O3B LMT 808 B 1 HETATM 10 O O4' LMT . . . O 6 106.611 112.997 75.751 1 35.61 ? O4' LMT 808 B 1 HETATM 11 O O5B LMT . . . O 6 104.999 112.136 78.593 1 35.61 ? O5B LMT 808 B 1 HETATM 12 O O6B LMT . . . O 6 103.223 114.714 77.552 1 35.61 ? O6B LMT 808 B 1 HETATM 13 C C1' LMT . . . O 6 105.099 107.759 82.815 1 35.61 ? C1' LMT 808 B 1 HETATM 14 C C2' LMT . . . O 6 104.928 107.113 81.448 1 35.61 ? C2' LMT 808 B 1 HETATM 15 C C3' LMT . . . O 6 105.445 107.996 80.361 1 35.61 ? C3' LMT 808 B 1 HETATM 16 C C4' LMT . . . O 6 104.952 109.41 80.396 1 35.61 ? C4' LMT 808 B 1 HETATM 17 C C5' LMT . . . O 6 104.959 110.009 81.815 1 35.61 ? C5' LMT 808 B 1 HETATM 18 C C6' LMT . . . O 6 104.184 111.279 81.865 1 35.61 ? C6' LMT 808 B 1 HETATM 19 O O1' LMT . . . O 6 104.591 106.955 83.794 1 35.61 ? O1' LMT 808 B 1 HETATM 20 O O2' LMT . . . O 6 105.685 105.894 81.415 1 35.61 ? O2' LMT 808 B 1 HETATM 21 O O3' LMT . . . O 6 105.087 107.393 79.089 1 35.61 ? O3' LMT 808 B 1 HETATM 22 O O5' LMT . . . O 6 104.42 109.088 82.845 1 35.61 ? O5' LMT 808 B 1 HETATM 23 O O6' LMT . . . O 6 104.096 111.708 83.198 1 35.61 ? O6' LMT 808 B 1 HETATM 24 C C1 LMT . . . O 6 104.694 107.529 85.071 1 35.61 ? C1 LMT 808 B 1 HETATM 25 C C2 LMT . . . O 6 105.067 106.458 86.117 1 35.61 ? C2 LMT 808 B 1 HETATM 26 C C3 LMT . . . O 6 105.849 107.137 87.243 1 35.61 ? C3 LMT 808 B 1 HETATM 27 C C4 LMT . . . O 6 106.15 106.144 88.395 1 35.61 ? C4 LMT 808 B 1 HETATM 28 C C5 LMT . . . O 6 106.916 106.831 89.546 1 35.61 ? C5 LMT 808 B 1 HETATM 29 C C6 LMT . . . O 6 105.992 106.899 90.807 1 35.61 ? C6 LMT 808 B 1 HETATM 30 C C7 LMT . . . O 6 106.855 107.041 92.085 1 35.61 ? C7 LMT 808 B 1 HETATM 31 C C8 LMT . . . O 6 105.956 106.854 93.339 1 35.61 ? C8 LMT 808 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #