data_6QSY # _model_server_result.job_id Mzb6Tg6YSBLcB7aIju27AA _model_server_result.datetime_utc '2025-08-31 05:59:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qsy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 6QSY # _exptl.entry_id 6QSY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QSY _cell.length_a 57.26 _cell.length_b 57.26 _cell.length_c 174.82 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QSY _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 1 2 A,B,C,D,E,F,G,H 1 3 A,B,C,D,E,F,G,H 1 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 57.26 57.26 0 3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 57.26 57.26 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N ? 3 F N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 11 _struct_conn.ptnr1_auth_asym_id P _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 10 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id NH2 _struct_conn.ptnr2_label_seq_id 12 _struct_conn.ptnr2_auth_asym_id P _struct_conn.ptnr2_auth_comp_id NH2 _struct_conn.ptnr2_auth_seq_id 11 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.327 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 243 n n C1 C2 PGE sing 244 n n C1 H1 PGE sing 245 n n C1 H12 PGE sing 246 n n O1 HO1 PGE sing 247 n n C2 O2 PGE sing 248 n n C2 H2 PGE sing 249 n n C2 H22 PGE sing 250 n n O2 C3 PGE sing 251 n n C3 C4 PGE sing 252 n n C3 H3 PGE sing 253 n n C3 H32 PGE sing 254 n n C4 O3 PGE sing 255 n n C4 H4 PGE sing 256 n n C4 H42 PGE sing 257 n n O4 C6 PGE sing 258 n n O4 HO4 PGE sing 259 n n C6 C5 PGE sing 260 n n C6 H6 PGE sing 261 n n C6 H62 PGE sing 262 n n C5 O3 PGE sing 263 n n C5 H5 PGE sing 264 n n C5 H52 PGE sing 265 n n # _atom_sites.entry_id 6QSY _atom_sites.fract_transf_matrix[1][1] 0.017464 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017464 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00572 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PGE A 1 201 1 PGE PGE . D 4 TRS A 1 202 2 TRS TRS . E 3 PGE A 1 203 3 PGE PGE . F 3 PGE A 1 204 4 PGE PGE . G 5 HOH A 1 301 41 HOH HOH . G 5 HOH A 2 302 55 HOH HOH . G 5 HOH A 3 303 17 HOH HOH . G 5 HOH A 4 304 29 HOH HOH . G 5 HOH A 5 305 65 HOH HOH . G 5 HOH A 6 306 40 HOH HOH . G 5 HOH A 7 307 54 HOH HOH . G 5 HOH A 8 308 35 HOH HOH . G 5 HOH A 9 309 59 HOH HOH . G 5 HOH A 10 310 5 HOH HOH . G 5 HOH A 11 311 10 HOH HOH . G 5 HOH A 12 312 66 HOH HOH . G 5 HOH A 13 313 51 HOH HOH . G 5 HOH A 14 314 58 HOH HOH . G 5 HOH A 15 315 56 HOH HOH . G 5 HOH A 16 316 13 HOH HOH . G 5 HOH A 17 317 60 HOH HOH . G 5 HOH A 18 318 31 HOH HOH . G 5 HOH A 19 319 16 HOH HOH . G 5 HOH A 20 320 57 HOH HOH . G 5 HOH A 21 321 19 HOH HOH . G 5 HOH A 22 322 49 HOH HOH . G 5 HOH A 23 323 9 HOH HOH . G 5 HOH A 24 324 23 HOH HOH . G 5 HOH A 25 325 61 HOH HOH . G 5 HOH A 26 326 11 HOH HOH . G 5 HOH A 27 327 12 HOH HOH . G 5 HOH A 28 328 1 HOH HOH . G 5 HOH A 29 329 34 HOH HOH . G 5 HOH A 30 330 68 HOH HOH . G 5 HOH A 31 331 52 HOH HOH . G 5 HOH A 32 332 44 HOH HOH . G 5 HOH A 33 333 26 HOH HOH . G 5 HOH A 34 334 32 HOH HOH . G 5 HOH A 35 335 67 HOH HOH . G 5 HOH A 36 336 33 HOH HOH . G 5 HOH A 37 337 30 HOH HOH . G 5 HOH A 38 338 14 HOH HOH . G 5 HOH A 39 339 8 HOH HOH . G 5 HOH A 40 340 42 HOH HOH . G 5 HOH A 41 341 2 HOH HOH . G 5 HOH A 42 342 47 HOH HOH . G 5 HOH A 43 343 39 HOH HOH . G 5 HOH A 44 344 4 HOH HOH . G 5 HOH A 45 345 3 HOH HOH . G 5 HOH A 46 346 43 HOH HOH . G 5 HOH A 47 347 36 HOH HOH . G 5 HOH A 48 348 6 HOH HOH . G 5 HOH A 49 349 21 HOH HOH . G 5 HOH A 50 350 20 HOH HOH . G 5 HOH A 51 351 64 HOH HOH . G 5 HOH A 52 352 28 HOH HOH . G 5 HOH A 53 353 25 HOH HOH . G 5 HOH A 54 354 69 HOH HOH . G 5 HOH A 55 355 22 HOH HOH . G 5 HOH A 56 356 38 HOH HOH . G 5 HOH A 57 357 62 HOH HOH . G 5 HOH A 58 358 50 HOH HOH . G 5 HOH A 59 359 70 HOH HOH . G 5 HOH A 60 360 27 HOH HOH . G 5 HOH A 61 361 18 HOH HOH . G 5 HOH A 62 362 15 HOH HOH . G 5 HOH A 63 363 7 HOH HOH . G 5 HOH A 64 364 46 HOH HOH . G 5 HOH A 65 365 53 HOH HOH . G 5 HOH A 66 366 48 HOH HOH . G 5 HOH A 67 367 63 HOH HOH . H 5 HOH P 1 101 45 HOH HOH . H 5 HOH P 2 102 37 HOH HOH . H 5 HOH P 3 103 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . E 3 26.347 24.596 -12.145 1 26.6 ? C1 PGE 203 A 1 HETATM 2 O O1 PGE . . . E 3 25.708 24.669 -13.418 1 34.31 ? O1 PGE 203 A 1 HETATM 3 C C2 PGE . . . E 3 27.435 25.641 -12.211 1 34.85 ? C2 PGE 203 A 1 HETATM 4 O O2 PGE . . . E 3 28.356 25.307 -13.245 1 41.65 ? O2 PGE 203 A 1 HETATM 5 C C3 PGE . . . E 3 28.431 26.251 -14.32 1 49.43 ? C3 PGE 203 A 1 HETATM 6 C C4 PGE . . . E 3 29.832 26.857 -14.36 1 52.91 ? C4 PGE 203 A 1 HETATM 7 O O3 PGE . . . E 3 30.824 25.855 -14.078 1 47.39 ? O3 PGE 203 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 384 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #