data_6QTT # _model_server_result.job_id kKH5CGCkPCRI80St3iHA0g _model_server_result.datetime_utc '2024-11-30 17:29:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qtt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6QTT # _exptl.entry_id 6QTT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 102.046 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MALONATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QTT _cell.length_a 48.57 _cell.length_b 55.163 _cell.length_c 102.822 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QTT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C CYS 164 A CYS 509 1_555 A N CSO 165 A CSO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C CSO 165 A CSO 510 1_555 A N VAL 166 A VAL 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? # _chem_comp.formula 'C3 H2 O4 -2' _chem_comp.formula_weight 102.046 _chem_comp.id MLI _chem_comp.mon_nstd_flag . _chem_comp.name 'MALONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MLI sing 270 n n C1 C3 MLI sing 271 n n C1 H11 MLI sing 272 n n C1 H12 MLI sing 273 n n C2 O6 MLI doub 274 n n C2 O7 MLI sing 275 n n C3 O8 MLI doub 276 n n C3 O9 MLI sing 277 n n # _atom_sites.entry_id 6QTT _atom_sites.fract_transf_matrix[1][1] 0.020589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009726 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MLI A 1 701 1 MLI MLI . D 3 MLI A 1 702 2 MLI MLI . E 4 GOL A 1 703 1 GOL GOL . F 5 HOH A 1 801 197 HOH HOH . F 5 HOH A 2 802 124 HOH HOH . F 5 HOH A 3 803 66 HOH HOH . F 5 HOH A 4 804 234 HOH HOH . F 5 HOH A 5 805 135 HOH HOH . F 5 HOH A 6 806 13 HOH HOH . F 5 HOH A 7 807 213 HOH HOH . F 5 HOH A 8 808 133 HOH HOH . F 5 HOH A 9 809 196 HOH HOH . F 5 HOH A 10 810 56 HOH HOH . F 5 HOH A 11 811 233 HOH HOH . F 5 HOH A 12 812 216 HOH HOH . F 5 HOH A 13 813 136 HOH HOH . F 5 HOH A 14 814 63 HOH HOH . F 5 HOH A 15 815 149 HOH HOH . F 5 HOH A 16 816 62 HOH HOH . F 5 HOH A 17 817 138 HOH HOH . F 5 HOH A 18 818 11 HOH HOH . F 5 HOH A 19 819 183 HOH HOH . F 5 HOH A 20 820 77 HOH HOH . F 5 HOH A 21 821 200 HOH HOH . F 5 HOH A 22 822 70 HOH HOH . F 5 HOH A 23 823 74 HOH HOH . F 5 HOH A 24 824 226 HOH HOH . F 5 HOH A 25 825 219 HOH HOH . F 5 HOH A 26 826 186 HOH HOH . F 5 HOH A 27 827 156 HOH HOH . F 5 HOH A 28 828 32 HOH HOH . F 5 HOH A 29 829 57 HOH HOH . F 5 HOH A 30 830 206 HOH HOH . F 5 HOH A 31 831 228 HOH HOH . F 5 HOH A 32 832 137 HOH HOH . F 5 HOH A 33 833 38 HOH HOH . F 5 HOH A 34 834 94 HOH HOH . F 5 HOH A 35 835 143 HOH HOH . F 5 HOH A 36 836 91 HOH HOH . F 5 HOH A 37 837 67 HOH HOH . F 5 HOH A 38 838 114 HOH HOH . F 5 HOH A 39 839 33 HOH HOH . F 5 HOH A 40 840 53 HOH HOH . F 5 HOH A 41 841 76 HOH HOH . F 5 HOH A 42 842 119 HOH HOH . F 5 HOH A 43 843 190 HOH HOH . F 5 HOH A 44 844 147 HOH HOH . F 5 HOH A 45 845 222 HOH HOH . F 5 HOH A 46 846 175 HOH HOH . F 5 HOH A 47 847 144 HOH HOH . F 5 HOH A 48 848 105 HOH HOH . F 5 HOH A 49 849 51 HOH HOH . F 5 HOH A 50 850 28 HOH HOH . F 5 HOH A 51 851 7 HOH HOH . F 5 HOH A 52 852 41 HOH HOH . F 5 HOH A 53 853 8 HOH HOH . F 5 HOH A 54 854 50 HOH HOH . F 5 HOH A 55 855 169 HOH HOH . F 5 HOH A 56 856 23 HOH HOH . F 5 HOH A 57 857 102 HOH HOH . F 5 HOH A 58 858 92 HOH HOH . F 5 HOH A 59 859 141 HOH HOH . F 5 HOH A 60 860 16 HOH HOH . F 5 HOH A 61 861 95 HOH HOH . F 5 HOH A 62 862 115 HOH HOH . F 5 HOH A 63 863 6 HOH HOH . F 5 HOH A 64 864 89 HOH HOH . F 5 HOH A 65 865 69 HOH HOH . F 5 HOH A 66 866 48 HOH HOH . F 5 HOH A 67 867 110 HOH HOH . F 5 HOH A 68 868 36 HOH HOH . F 5 HOH A 69 869 98 HOH HOH . F 5 HOH A 70 870 225 HOH HOH . F 5 HOH A 71 871 44 HOH HOH . F 5 HOH A 72 872 31 HOH HOH . F 5 HOH A 73 873 82 HOH HOH . F 5 HOH A 74 874 65 HOH HOH . F 5 HOH A 75 875 93 HOH HOH . F 5 HOH A 76 876 161 HOH HOH . F 5 HOH A 77 877 47 HOH HOH . F 5 HOH A 78 878 5 HOH HOH . F 5 HOH A 79 879 55 HOH HOH . F 5 HOH A 80 880 60 HOH HOH . F 5 HOH A 81 881 227 HOH HOH . F 5 HOH A 82 882 166 HOH HOH . F 5 HOH A 83 883 184 HOH HOH . F 5 HOH A 84 884 29 HOH HOH . F 5 HOH A 85 885 195 HOH HOH . F 5 HOH A 86 886 231 HOH HOH . F 5 HOH A 87 887 140 HOH HOH . F 5 HOH A 88 888 198 HOH HOH . F 5 HOH A 89 889 237 HOH HOH . F 5 HOH A 90 890 58 HOH HOH . F 5 HOH A 91 891 17 HOH HOH . F 5 HOH A 92 892 39 HOH HOH . F 5 HOH A 93 893 30 HOH HOH . F 5 HOH A 94 894 126 HOH HOH . F 5 HOH A 95 895 40 HOH HOH . F 5 HOH A 96 896 107 HOH HOH . F 5 HOH A 97 897 20 HOH HOH . F 5 HOH A 98 898 26 HOH HOH . F 5 HOH A 99 899 9 HOH HOH . F 5 HOH A 100 900 15 HOH HOH . F 5 HOH A 101 901 3 HOH HOH . F 5 HOH A 102 902 130 HOH HOH . F 5 HOH A 103 903 109 HOH HOH . F 5 HOH A 104 904 27 HOH HOH . F 5 HOH A 105 905 217 HOH HOH . F 5 HOH A 106 906 10 HOH HOH . F 5 HOH A 107 907 176 HOH HOH . F 5 HOH A 108 908 113 HOH HOH . F 5 HOH A 109 909 4 HOH HOH . F 5 HOH A 110 910 90 HOH HOH . F 5 HOH A 111 911 59 HOH HOH . F 5 HOH A 112 912 157 HOH HOH . F 5 HOH A 113 913 153 HOH HOH . F 5 HOH A 114 914 148 HOH HOH . F 5 HOH A 115 915 1 HOH HOH . F 5 HOH A 116 916 87 HOH HOH . F 5 HOH A 117 917 118 HOH HOH . F 5 HOH A 118 918 71 HOH HOH . F 5 HOH A 119 919 215 HOH HOH . F 5 HOH A 120 920 125 HOH HOH . F 5 HOH A 121 921 210 HOH HOH . F 5 HOH A 122 922 46 HOH HOH . F 5 HOH A 123 923 117 HOH HOH . F 5 HOH A 124 924 18 HOH HOH . F 5 HOH A 125 925 103 HOH HOH . F 5 HOH A 126 926 54 HOH HOH . F 5 HOH A 127 927 181 HOH HOH . F 5 HOH A 128 928 21 HOH HOH . F 5 HOH A 129 929 100 HOH HOH . F 5 HOH A 130 930 108 HOH HOH . F 5 HOH A 131 931 112 HOH HOH . F 5 HOH A 132 932 34 HOH HOH . F 5 HOH A 133 933 209 HOH HOH . F 5 HOH A 134 934 42 HOH HOH . F 5 HOH A 135 935 19 HOH HOH . F 5 HOH A 136 936 211 HOH HOH . F 5 HOH A 137 937 180 HOH HOH . F 5 HOH A 138 938 151 HOH HOH . F 5 HOH A 139 939 150 HOH HOH . F 5 HOH A 140 940 22 HOH HOH . F 5 HOH A 141 941 123 HOH HOH . F 5 HOH A 142 942 61 HOH HOH . F 5 HOH A 143 943 49 HOH HOH . F 5 HOH A 144 944 230 HOH HOH . F 5 HOH A 145 945 192 HOH HOH . F 5 HOH A 146 946 104 HOH HOH . F 5 HOH A 147 947 72 HOH HOH . F 5 HOH A 148 948 84 HOH HOH . F 5 HOH A 149 949 155 HOH HOH . F 5 HOH A 150 950 78 HOH HOH . F 5 HOH A 151 951 24 HOH HOH . F 5 HOH A 152 952 134 HOH HOH . F 5 HOH A 153 953 201 HOH HOH . F 5 HOH A 154 954 85 HOH HOH . F 5 HOH A 155 955 177 HOH HOH . F 5 HOH A 156 956 172 HOH HOH . F 5 HOH A 157 957 162 HOH HOH . F 5 HOH A 158 958 188 HOH HOH . F 5 HOH A 159 959 205 HOH HOH . F 5 HOH A 160 960 101 HOH HOH . F 5 HOH A 161 961 122 HOH HOH . F 5 HOH A 162 962 224 HOH HOH . F 5 HOH A 163 963 64 HOH HOH . F 5 HOH A 164 964 173 HOH HOH . F 5 HOH A 165 965 142 HOH HOH . F 5 HOH A 166 966 221 HOH HOH . F 5 HOH A 167 967 80 HOH HOH . F 5 HOH A 168 968 25 HOH HOH . F 5 HOH A 169 969 88 HOH HOH . F 5 HOH A 170 970 202 HOH HOH . F 5 HOH A 171 971 52 HOH HOH . F 5 HOH A 172 972 120 HOH HOH . F 5 HOH A 173 973 83 HOH HOH . F 5 HOH A 174 974 35 HOH HOH . F 5 HOH A 175 975 199 HOH HOH . F 5 HOH A 176 976 45 HOH HOH . F 5 HOH A 177 977 121 HOH HOH . F 5 HOH A 178 978 79 HOH HOH . F 5 HOH A 179 979 204 HOH HOH . F 5 HOH A 180 980 12 HOH HOH . F 5 HOH A 181 981 81 HOH HOH . F 5 HOH A 182 982 191 HOH HOH . F 5 HOH A 183 983 163 HOH HOH . F 5 HOH A 184 984 170 HOH HOH . F 5 HOH A 185 985 37 HOH HOH . F 5 HOH A 186 986 193 HOH HOH . F 5 HOH A 187 987 75 HOH HOH . F 5 HOH A 188 988 14 HOH HOH . F 5 HOH A 189 989 131 HOH HOH . F 5 HOH A 190 990 111 HOH HOH . F 5 HOH A 191 991 189 HOH HOH . F 5 HOH A 192 992 236 HOH HOH . F 5 HOH A 193 993 127 HOH HOH . F 5 HOH A 194 994 68 HOH HOH . F 5 HOH A 195 995 158 HOH HOH . F 5 HOH A 196 996 165 HOH HOH . F 5 HOH A 197 997 159 HOH HOH . F 5 HOH A 198 998 43 HOH HOH . F 5 HOH A 199 999 116 HOH HOH . F 5 HOH A 200 1000 154 HOH HOH . F 5 HOH A 201 1001 232 HOH HOH . F 5 HOH A 202 1002 207 HOH HOH . F 5 HOH A 203 1003 235 HOH HOH . F 5 HOH A 204 1004 139 HOH HOH . F 5 HOH A 205 1005 145 HOH HOH . F 5 HOH A 206 1006 168 HOH HOH . F 5 HOH A 207 1007 96 HOH HOH . F 5 HOH A 208 1008 239 HOH HOH . F 5 HOH A 209 1009 164 HOH HOH . F 5 HOH A 210 1010 2 HOH HOH . F 5 HOH A 211 1011 178 HOH HOH . F 5 HOH A 212 1012 229 HOH HOH . F 5 HOH A 213 1013 182 HOH HOH . F 5 HOH A 214 1014 167 HOH HOH . F 5 HOH A 215 1015 132 HOH HOH . F 5 HOH A 216 1016 86 HOH HOH . F 5 HOH A 217 1017 187 HOH HOH . F 5 HOH A 218 1018 174 HOH HOH . F 5 HOH A 219 1019 218 HOH HOH . F 5 HOH A 220 1020 194 HOH HOH . F 5 HOH A 221 1021 179 HOH HOH . F 5 HOH A 222 1022 238 HOH HOH . F 5 HOH A 223 1023 160 HOH HOH . F 5 HOH A 224 1024 185 HOH HOH . F 5 HOH A 225 1025 220 HOH HOH . F 5 HOH A 226 1026 146 HOH HOH . F 5 HOH A 227 1027 129 HOH HOH . F 5 HOH A 228 1028 203 HOH HOH . F 5 HOH A 229 1029 97 HOH HOH . F 5 HOH A 230 1030 99 HOH HOH . F 5 HOH A 231 1031 106 HOH HOH . F 5 HOH A 232 1032 223 HOH HOH . F 5 HOH A 233 1033 171 HOH HOH . F 5 HOH A 234 1034 214 HOH HOH . F 5 HOH A 235 1035 208 HOH HOH . F 5 HOH A 236 1036 212 HOH HOH . G 5 HOH B 1 101 152 HOH HOH . G 5 HOH B 2 102 73 HOH HOH . G 5 HOH B 3 103 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLI . . . C 3 7.756 -11.339 2.192 1 32.54 ? C1 MLI 701 A 1 HETATM 2 C C2 MLI . . . C 3 6.945 -10.845 0.997 1 37.71 ? C2 MLI 701 A 1 HETATM 3 C C3 MLI . . . C 3 7.461 -12.808 2.456 1 40.48 ? C3 MLI 701 A 1 HETATM 4 O O6 MLI . . . C 3 7.391 -9.841 0.363 1 28.21 ? O6 MLI 701 A 1 HETATM 5 O O7 MLI . . . C 3 5.86 -11.426 0.666 1 27.37 ? O7 MLI 701 A 1 HETATM 6 O O8 MLI . . . C 3 8.309 -13.689 2.163 1 42.33 ? O8 MLI 701 A 1 HETATM 7 O O9 MLI . . . C 3 6.359 -13.133 2.968 1 54.76 ? O9 MLI 701 A 1 HETATM 8 H H11 MLI . . . C 3 7.52 -10.819 2.977 1 39.06 ? H11 MLI 701 A 1 HETATM 9 H H12 MLI . . . C 3 8.702 -11.23 2.005 1 39.06 ? H12 MLI 701 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 376 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 9 #