data_6QTX # _model_server_result.job_id QVzcdalLMwBTVN79xFt3aw _model_server_result.datetime_utc '2024-10-20 00:51:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qtx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 6QTX # _exptl.entry_id 6QTX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QTX _cell.length_a 48.465 _cell.length_b 55.127 _cell.length_c 103.538 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QTX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TRP 146 A TRP 491 1_555 A N CSO 147 A CSO 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C CSO 147 A CSO 492 1_555 A N THR 148 A THR 493 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale3 A C CYS 164 A CYS 509 1_555 A N CSO 165 A CSO 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C CSO 165 A CSO 510 1_555 A N VAL 166 A VAL 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 6QTX _atom_sites.fract_transf_matrix[1][1] 0.020633 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01814 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009658 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 701 1 SO4 SO4 . D 3 SO4 A 1 702 2 SO4 SO4 . E 4 GOL A 1 703 1 GOL GOL . F 4 GOL A 1 704 2 GOL GOL . G 5 HOH A 1 801 168 HOH HOH . G 5 HOH A 2 802 172 HOH HOH . G 5 HOH A 3 803 209 HOH HOH . G 5 HOH A 4 804 69 HOH HOH . G 5 HOH A 5 805 173 HOH HOH . G 5 HOH A 6 806 191 HOH HOH . G 5 HOH A 7 807 151 HOH HOH . G 5 HOH A 8 808 56 HOH HOH . G 5 HOH A 9 809 133 HOH HOH . G 5 HOH A 10 810 59 HOH HOH . G 5 HOH A 11 811 169 HOH HOH . G 5 HOH A 12 812 107 HOH HOH . G 5 HOH A 13 813 36 HOH HOH . G 5 HOH A 14 814 19 HOH HOH . G 5 HOH A 15 815 62 HOH HOH . G 5 HOH A 16 816 76 HOH HOH . G 5 HOH A 17 817 83 HOH HOH . G 5 HOH A 18 818 161 HOH HOH . G 5 HOH A 19 819 97 HOH HOH . G 5 HOH A 20 820 150 HOH HOH . G 5 HOH A 21 821 95 HOH HOH . G 5 HOH A 22 822 146 HOH HOH . G 5 HOH A 23 823 35 HOH HOH . G 5 HOH A 24 824 65 HOH HOH . G 5 HOH A 25 825 119 HOH HOH . G 5 HOH A 26 826 149 HOH HOH . G 5 HOH A 27 827 138 HOH HOH . G 5 HOH A 28 828 43 HOH HOH . G 5 HOH A 29 829 159 HOH HOH . G 5 HOH A 30 830 92 HOH HOH . G 5 HOH A 31 831 153 HOH HOH . G 5 HOH A 32 832 68 HOH HOH . G 5 HOH A 33 833 108 HOH HOH . G 5 HOH A 34 834 40 HOH HOH . G 5 HOH A 35 835 139 HOH HOH . G 5 HOH A 36 836 61 HOH HOH . G 5 HOH A 37 837 112 HOH HOH . G 5 HOH A 38 838 30 HOH HOH . G 5 HOH A 39 839 79 HOH HOH . G 5 HOH A 40 840 38 HOH HOH . G 5 HOH A 41 841 50 HOH HOH . G 5 HOH A 42 842 162 HOH HOH . G 5 HOH A 43 843 5 HOH HOH . G 5 HOH A 44 844 88 HOH HOH . G 5 HOH A 45 845 27 HOH HOH . G 5 HOH A 46 846 20 HOH HOH . G 5 HOH A 47 847 13 HOH HOH . G 5 HOH A 48 848 166 HOH HOH . G 5 HOH A 49 849 134 HOH HOH . G 5 HOH A 50 850 90 HOH HOH . G 5 HOH A 51 851 100 HOH HOH . G 5 HOH A 52 852 1 HOH HOH . G 5 HOH A 53 853 127 HOH HOH . G 5 HOH A 54 854 70 HOH HOH . G 5 HOH A 55 855 29 HOH HOH . G 5 HOH A 56 856 31 HOH HOH . G 5 HOH A 57 857 46 HOH HOH . G 5 HOH A 58 858 116 HOH HOH . G 5 HOH A 59 859 213 HOH HOH . G 5 HOH A 60 860 22 HOH HOH . G 5 HOH A 61 861 44 HOH HOH . G 5 HOH A 62 862 78 HOH HOH . G 5 HOH A 63 863 16 HOH HOH . G 5 HOH A 64 864 85 HOH HOH . G 5 HOH A 65 865 3 HOH HOH . G 5 HOH A 66 866 24 HOH HOH . G 5 HOH A 67 867 110 HOH HOH . G 5 HOH A 68 868 129 HOH HOH . G 5 HOH A 69 869 18 HOH HOH . G 5 HOH A 70 870 158 HOH HOH . G 5 HOH A 71 871 189 HOH HOH . G 5 HOH A 72 872 39 HOH HOH . G 5 HOH A 73 873 84 HOH HOH . G 5 HOH A 74 874 7 HOH HOH . G 5 HOH A 75 875 94 HOH HOH . G 5 HOH A 76 876 193 HOH HOH . G 5 HOH A 77 877 117 HOH HOH . G 5 HOH A 78 878 15 HOH HOH . G 5 HOH A 79 879 103 HOH HOH . G 5 HOH A 80 880 152 HOH HOH . G 5 HOH A 81 881 118 HOH HOH . G 5 HOH A 82 882 87 HOH HOH . G 5 HOH A 83 883 48 HOH HOH . G 5 HOH A 84 884 11 HOH HOH . G 5 HOH A 85 885 148 HOH HOH . G 5 HOH A 86 886 21 HOH HOH . G 5 HOH A 87 887 198 HOH HOH . G 5 HOH A 88 888 45 HOH HOH . G 5 HOH A 89 889 131 HOH HOH . G 5 HOH A 90 890 99 HOH HOH . G 5 HOH A 91 891 14 HOH HOH . G 5 HOH A 92 892 77 HOH HOH . G 5 HOH A 93 893 2 HOH HOH . G 5 HOH A 94 894 187 HOH HOH . G 5 HOH A 95 895 6 HOH HOH . G 5 HOH A 96 896 197 HOH HOH . G 5 HOH A 97 897 130 HOH HOH . G 5 HOH A 98 898 177 HOH HOH . G 5 HOH A 99 899 64 HOH HOH . G 5 HOH A 100 900 210 HOH HOH . G 5 HOH A 101 901 136 HOH HOH . G 5 HOH A 102 902 51 HOH HOH . G 5 HOH A 103 903 34 HOH HOH . G 5 HOH A 104 904 125 HOH HOH . G 5 HOH A 105 905 67 HOH HOH . G 5 HOH A 106 906 82 HOH HOH . G 5 HOH A 107 907 8 HOH HOH . G 5 HOH A 108 908 4 HOH HOH . G 5 HOH A 109 909 219 HOH HOH . G 5 HOH A 110 910 37 HOH HOH . G 5 HOH A 111 911 9 HOH HOH . G 5 HOH A 112 912 163 HOH HOH . G 5 HOH A 113 913 12 HOH HOH . G 5 HOH A 114 914 160 HOH HOH . G 5 HOH A 115 915 23 HOH HOH . G 5 HOH A 116 916 196 HOH HOH . G 5 HOH A 117 917 28 HOH HOH . G 5 HOH A 118 918 91 HOH HOH . G 5 HOH A 119 919 26 HOH HOH . G 5 HOH A 120 920 121 HOH HOH . G 5 HOH A 121 921 106 HOH HOH . G 5 HOH A 122 922 52 HOH HOH . G 5 HOH A 123 923 47 HOH HOH . G 5 HOH A 124 924 171 HOH HOH . G 5 HOH A 125 925 71 HOH HOH . G 5 HOH A 126 926 111 HOH HOH . G 5 HOH A 127 927 54 HOH HOH . G 5 HOH A 128 928 128 HOH HOH . G 5 HOH A 129 929 66 HOH HOH . G 5 HOH A 130 930 185 HOH HOH . G 5 HOH A 131 931 170 HOH HOH . G 5 HOH A 132 932 81 HOH HOH . G 5 HOH A 133 933 109 HOH HOH . G 5 HOH A 134 934 63 HOH HOH . G 5 HOH A 135 935 135 HOH HOH . G 5 HOH A 136 936 60 HOH HOH . G 5 HOH A 137 937 58 HOH HOH . G 5 HOH A 138 938 123 HOH HOH . G 5 HOH A 139 939 132 HOH HOH . G 5 HOH A 140 940 154 HOH HOH . G 5 HOH A 141 941 113 HOH HOH . G 5 HOH A 142 942 216 HOH HOH . G 5 HOH A 143 943 55 HOH HOH . G 5 HOH A 144 944 126 HOH HOH . G 5 HOH A 145 945 176 HOH HOH . G 5 HOH A 146 946 155 HOH HOH . G 5 HOH A 147 947 53 HOH HOH . G 5 HOH A 148 948 17 HOH HOH . G 5 HOH A 149 949 72 HOH HOH . G 5 HOH A 150 950 74 HOH HOH . G 5 HOH A 151 951 227 HOH HOH . G 5 HOH A 152 952 57 HOH HOH . G 5 HOH A 153 953 184 HOH HOH . G 5 HOH A 154 954 201 HOH HOH . G 5 HOH A 155 955 156 HOH HOH . G 5 HOH A 156 956 174 HOH HOH . G 5 HOH A 157 957 86 HOH HOH . G 5 HOH A 158 958 42 HOH HOH . G 5 HOH A 159 959 120 HOH HOH . G 5 HOH A 160 960 115 HOH HOH . G 5 HOH A 161 961 124 HOH HOH . G 5 HOH A 162 962 75 HOH HOH . G 5 HOH A 163 963 93 HOH HOH . G 5 HOH A 164 964 144 HOH HOH . G 5 HOH A 165 965 32 HOH HOH . G 5 HOH A 166 966 96 HOH HOH . G 5 HOH A 167 967 137 HOH HOH . G 5 HOH A 168 968 199 HOH HOH . G 5 HOH A 169 969 220 HOH HOH . G 5 HOH A 170 970 89 HOH HOH . G 5 HOH A 171 971 183 HOH HOH . G 5 HOH A 172 972 104 HOH HOH . G 5 HOH A 173 973 80 HOH HOH . G 5 HOH A 174 974 180 HOH HOH . G 5 HOH A 175 975 141 HOH HOH . G 5 HOH A 176 976 140 HOH HOH . G 5 HOH A 177 977 188 HOH HOH . G 5 HOH A 178 978 10 HOH HOH . G 5 HOH A 179 979 192 HOH HOH . G 5 HOH A 180 980 200 HOH HOH . G 5 HOH A 181 981 195 HOH HOH . G 5 HOH A 182 982 49 HOH HOH . G 5 HOH A 183 983 41 HOH HOH . G 5 HOH A 184 984 145 HOH HOH . G 5 HOH A 185 985 205 HOH HOH . G 5 HOH A 186 986 102 HOH HOH . G 5 HOH A 187 987 186 HOH HOH . G 5 HOH A 188 988 147 HOH HOH . G 5 HOH A 189 989 25 HOH HOH . G 5 HOH A 190 990 73 HOH HOH . G 5 HOH A 191 991 223 HOH HOH . G 5 HOH A 192 992 105 HOH HOH . G 5 HOH A 193 993 190 HOH HOH . G 5 HOH A 194 994 214 HOH HOH . G 5 HOH A 195 995 157 HOH HOH . G 5 HOH A 196 996 164 HOH HOH . G 5 HOH A 197 997 179 HOH HOH . G 5 HOH A 198 998 203 HOH HOH . G 5 HOH A 199 999 182 HOH HOH . G 5 HOH A 200 1000 212 HOH HOH . G 5 HOH A 201 1001 114 HOH HOH . G 5 HOH A 202 1002 142 HOH HOH . G 5 HOH A 203 1003 222 HOH HOH . G 5 HOH A 204 1004 208 HOH HOH . G 5 HOH A 205 1005 218 HOH HOH . G 5 HOH A 206 1006 224 HOH HOH . G 5 HOH A 207 1007 181 HOH HOH . G 5 HOH A 208 1008 175 HOH HOH . G 5 HOH A 209 1009 225 HOH HOH . G 5 HOH A 210 1010 204 HOH HOH . G 5 HOH A 211 1011 207 HOH HOH . G 5 HOH A 212 1012 167 HOH HOH . G 5 HOH A 213 1013 211 HOH HOH . G 5 HOH A 214 1014 165 HOH HOH . G 5 HOH A 215 1015 101 HOH HOH . G 5 HOH A 216 1016 221 HOH HOH . G 5 HOH A 217 1017 143 HOH HOH . H 5 HOH B 1 301 217 HOH HOH . H 5 HOH B 2 302 33 HOH HOH . H 5 HOH B 3 303 98 HOH HOH . H 5 HOH B 4 304 206 HOH HOH . H 5 HOH B 5 305 178 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 -3.979 8.565 -5.699 1 47.24 ? C1 GOL 703 A 1 HETATM 2 O O1 GOL . . . E 4 -4.873 9.655 -5.927 1 36.21 ? O1 GOL 703 A 1 HETATM 3 C C2 GOL . . . E 4 -2.621 9.219 -5.31 1 21.33 ? C2 GOL 703 A 1 HETATM 4 O O2 GOL . . . E 4 -2.546 9.555 -3.998 1 32.43 ? O2 GOL 703 A 1 HETATM 5 C C3 GOL . . . E 4 -1.539 8.288 -5.621 1 23.21 ? C3 GOL 703 A 1 HETATM 6 O O3 GOL . . . E 4 -0.448 9.157 -5.917 1 14.06 ? O3 GOL 703 A 1 HETATM 7 H H11 GOL . . . E 4 -3.862 8.002 -6.48 1 56.67 ? H11 GOL 703 A 1 HETATM 8 H H12 GOL . . . E 4 -4.275 7.975 -4.988 1 56.67 ? H12 GOL 703 A 1 HETATM 9 H HO1 GOL . . . E 4 -5.624 9.313 -6.13 1 43.43 ? HO1 GOL 703 A 1 HETATM 10 H H2 GOL . . . E 4 -2.554 10.025 -5.846 1 25.58 ? H2 GOL 703 A 1 HETATM 11 H H31 GOL . . . E 4 -1.797 7.708 -6.355 1 27.83 ? H31 GOL 703 A 1 HETATM 12 H H32 GOL . . . E 4 -1.382 7.695 -4.869 1 27.83 ? H32 GOL 703 A 1 HETATM 13 H HO3 GOL . . . E 4 -0.433 9.251 -6.762 1 16.85 ? HO3 GOL 703 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #