data_6QU5 # _model_server_result.job_id eMNPrs8EfA4t-zLlb2kJMA _model_server_result.datetime_utc '2024-11-27 18:30:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qu5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":501}' # _entry.id 6QU5 # _exptl.entry_id 6QU5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QU5 _cell.length_a 115.251 _cell.length_b 132.513 _cell.length_c 282.699 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P 1 1 E,F,G,H,Q,R,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 L N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id H _struct_conn.ptnr1_label_atom_id NH2 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 193 _struct_conn.ptnr1_auth_asym_id H _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 173 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id T _struct_conn.ptnr2_label_atom_id O3 _struct_conn.ptnr2_label_comp_id CIT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id H _struct_conn.ptnr2_auth_comp_id CIT _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.413 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 6QU5 _atom_sites.fract_transf_matrix[1][1] 0.008677 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007546 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003537 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 CIT A 1 501 501 CIT CIT . J 3 GOL A 1 502 502 GOL GOL . K 4 JJ8 A 1 503 503 JJ8 a12 . L 2 CIT B 1 501 501 CIT CIT . M 3 GOL B 1 502 502 GOL GOL . N 4 JJ8 B 1 503 503 JJ8 a12 . O 2 CIT C 1 501 501 CIT CIT . P 2 CIT D 1 501 501 CIT CIT . Q 2 CIT E 1 501 501 CIT CIT . R 2 CIT F 1 501 501 CIT CIT . S 2 CIT G 1 501 501 CIT CIT . T 2 CIT H 1 501 501 CIT CIT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . P 2 -0.004 -15.286 5.933 1 155.83 ? C1 CIT 501 D 1 HETATM 2 O O1 CIT . . . P 2 0.219 -15.679 4.771 1 155.83 ? O1 CIT 501 D 1 HETATM 3 O O2 CIT . . . P 2 -0.327 -14.11 6.204 1 155.83 ? O2 CIT 501 D 1 HETATM 4 C C2 CIT . . . P 2 0.172 -16.257 7.098 1 155.83 ? C2 CIT 501 D 1 HETATM 5 C C3 CIT . . . P 2 -0.342 -17.697 6.929 1 155.83 ? C3 CIT 501 D 1 HETATM 6 O O7 CIT . . . P 2 0.326 -18.518 7.871 1 155.83 ? O7 CIT 501 D 1 HETATM 7 C C4 CIT . . . P 2 -1.844 -17.755 7.241 1 155.83 ? C4 CIT 501 D 1 HETATM 8 C C5 CIT . . . P 2 -2.189 -18.228 8.641 1 155.83 ? C5 CIT 501 D 1 HETATM 9 O O3 CIT . . . P 2 -3.323 -18.685 8.824 1 155.83 ? O3 CIT 501 D 1 HETATM 10 O O4 CIT . . . P 2 -1.329 -18.138 9.537 1 155.83 ? O4 CIT 501 D 1 HETATM 11 C C6 CIT . . . P 2 -0.049 -18.222 5.498 1 155.83 ? C6 CIT 501 D 1 HETATM 12 O O5 CIT . . . P 2 -1.011 -18.519 4.762 1 155.83 ? O5 CIT 501 D 1 HETATM 13 O O6 CIT . . . P 2 1.146 -18.32 5.178 1 155.83 ? O6 CIT 501 D 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 68 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #