data_6QU5 # _model_server_result.job_id jNFRa-a7WX_4iByI0cEvWw _model_server_result.datetime_utc '2024-11-30 17:03:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qu5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":503}' # _entry.id 6QU5 # _exptl.entry_id 6QU5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 227.09 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(3,4-dichlorophenyl)methyl]imidazole _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QU5 _cell.length_a 115.251 _cell.length_b 132.513 _cell.length_c 282.699 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P 1 1 E,F,G,H,Q,R,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 N N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id H _struct_conn.ptnr1_label_atom_id NH2 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 193 _struct_conn.ptnr1_auth_asym_id H _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 173 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id T _struct_conn.ptnr2_label_atom_id O3 _struct_conn.ptnr2_label_comp_id CIT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id H _struct_conn.ptnr2_auth_comp_id CIT _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.413 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H8 Cl2 N2' _chem_comp.formula_weight 227.09 _chem_comp.id JJ8 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(3,4-dichlorophenyl)methyl]imidazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N12 C13 JJ8 sing 204 n y N12 C11 JJ8 doub 205 n y C13 C14 JJ8 doub 206 n y C11 N10 JJ8 sing 207 n y C14 N10 JJ8 sing 208 n y C5 C6 JJ8 doub 209 n y C5 C4 JJ8 sing 210 n y N10 C9 JJ8 sing 211 n n C6 C1 JJ8 sing 212 n y CL7 C4 JJ8 sing 213 n n C4 C3 JJ8 doub 214 n y C1 C9 JJ8 sing 215 n n C1 C2 JJ8 doub 216 n y C3 C2 JJ8 sing 217 n y C3 CL8 JJ8 sing 218 n n C2 H1 JJ8 sing 219 n n C5 H2 JJ8 sing 220 n n C6 H3 JJ8 sing 221 n n C9 H4 JJ8 sing 222 n n C9 H5 JJ8 sing 223 n n C14 H6 JJ8 sing 224 n n C13 H7 JJ8 sing 225 n n C11 H8 JJ8 sing 226 n n # _atom_sites.entry_id 6QU5 _atom_sites.fract_transf_matrix[1][1] 0.008677 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007546 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003537 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 CIT A 1 501 501 CIT CIT . J 3 GOL A 1 502 502 GOL GOL . K 4 JJ8 A 1 503 503 JJ8 a12 . L 2 CIT B 1 501 501 CIT CIT . M 3 GOL B 1 502 502 GOL GOL . N 4 JJ8 B 1 503 503 JJ8 a12 . O 2 CIT C 1 501 501 CIT CIT . P 2 CIT D 1 501 501 CIT CIT . Q 2 CIT E 1 501 501 CIT CIT . R 2 CIT F 1 501 501 CIT CIT . S 2 CIT G 1 501 501 CIT CIT . T 2 CIT H 1 501 501 CIT CIT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL8 JJ8 . . . N 4 9.528 -20.536 62.632 1 155.83 ? CL8 JJ8 503 B 1 HETATM 2 C C3 JJ8 . . . N 4 8.808 -22.145 62.374 1 155.83 ? C3 JJ8 503 B 1 HETATM 3 C C2 JJ8 . . . N 4 8.385 -22.851 63.477 1 155.83 ? C2 JJ8 503 B 1 HETATM 4 C C4 JJ8 . . . N 4 8.672 -22.668 61.106 1 155.83 ? C4 JJ8 503 B 1 HETATM 5 CL CL7 JJ8 . . . N 4 9.233 -21.733 59.692 1 155.83 ? CL7 JJ8 503 B 1 HETATM 6 C C5 JJ8 . . . N 4 8.101 -23.914 60.927 1 155.83 ? C5 JJ8 503 B 1 HETATM 7 C C6 JJ8 . . . N 4 7.673 -24.631 62.032 1 155.83 ? C6 JJ8 503 B 1 HETATM 8 C C1 JJ8 . . . N 4 7.813 -24.096 63.318 1 155.83 ? C1 JJ8 503 B 1 HETATM 9 C C9 JJ8 . . . N 4 7.363 -24.814 64.563 1 155.83 ? C9 JJ8 503 B 1 HETATM 10 N N10 JJ8 . . . N 4 7.669 -26.207 64.374 1 155.83 ? N10 JJ8 503 B 1 HETATM 11 C C14 JJ8 . . . N 4 6.947 -27.042 63.632 1 155.83 ? C14 JJ8 503 B 1 HETATM 12 C C13 JJ8 . . . N 4 7.56 -28.253 63.683 1 155.83 ? C13 JJ8 503 B 1 HETATM 13 N N12 JJ8 . . . N 4 8.65 -28.119 64.468 1 155.83 ? N12 JJ8 503 B 1 HETATM 14 C C11 JJ8 . . . N 4 8.714 -26.843 64.89 1 155.83 ? C11 JJ8 503 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #