data_6QUN # _model_server_result.job_id 1fBAakODVUYasWz1x8kRPw _model_server_result.datetime_utc '2025-07-05 12:03:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qun # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6QUN # _exptl.entry_id 6QUN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6QUN _cell.length_a 77.677 _cell.length_b 77.677 _cell.length_c 407.346 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QUN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_556 x,x-y,-z+7/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 475.237 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 151 O SER 148 1_555 A N CSD 152 O CSD 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSD 152 O CSD 149 1_555 A N THR 153 O THR 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 B C SER 151 R SER 148 1_555 B N CSD 152 R CSD 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C CSD 152 R CSD 149 1_555 B N THR 153 R THR 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 252 n n PA O2A NAD sing 253 n n PA O5B NAD sing 254 n n PA O3 NAD sing 255 n n O2A HOA2 NAD sing 256 n n O5B C5B NAD sing 257 n n C5B C4B NAD sing 258 n n C5B H51A NAD sing 259 n n C5B H52A NAD sing 260 n n C4B O4B NAD sing 261 n n C4B C3B NAD sing 262 n n C4B H4B NAD sing 263 n n O4B C1B NAD sing 264 n n C3B O3B NAD sing 265 n n C3B C2B NAD sing 266 n n C3B H3B NAD sing 267 n n O3B HO3A NAD sing 268 n n C2B O2B NAD sing 269 n n C2B C1B NAD sing 270 n n C2B H2B NAD sing 271 n n O2B HO2A NAD sing 272 n n C1B N9A NAD sing 273 n n C1B H1B NAD sing 274 n n N9A C8A NAD sing 275 n y N9A C4A NAD sing 276 n y C8A N7A NAD doub 277 n y C8A H8A NAD sing 278 n n N7A C5A NAD sing 279 n y C5A C6A NAD sing 280 n y C5A C4A NAD doub 281 n y C6A N6A NAD sing 282 n n C6A N1A NAD doub 283 n y N6A H61A NAD sing 284 n n N6A H62A NAD sing 285 n n N1A C2A NAD sing 286 n y C2A N3A NAD doub 287 n y C2A H2A NAD sing 288 n n N3A C4A NAD sing 289 n y O3 PN NAD sing 290 n n PN O1N NAD doub 291 n n PN O2N NAD sing 292 n n PN O5D NAD sing 293 n n O5D C5D NAD sing 294 n n C5D C4D NAD sing 295 n n C5D H51N NAD sing 296 n n C5D H52N NAD sing 297 n n C4D O4D NAD sing 298 n n C4D C3D NAD sing 299 n n C4D H4D NAD sing 300 n n O4D C1D NAD sing 301 n n C3D O3D NAD sing 302 n n C3D C2D NAD sing 303 n n C3D H3D NAD sing 304 n n O3D HO3N NAD sing 305 n n C2D O2D NAD sing 306 n n C2D C1D NAD sing 307 n n C2D H2D NAD sing 308 n n O2D HO2N NAD sing 309 n n C1D N1N NAD sing 310 n n C1D H1D NAD sing 311 n n N1N C2N NAD sing 312 n y N1N C6N NAD doub 313 n y C2N C3N NAD doub 314 n y C2N H2N NAD sing 315 n n C3N C7N NAD sing 316 n n C3N C4N NAD sing 317 n y C7N O7N NAD doub 318 n n C7N N7N NAD sing 319 n n N7N H71N NAD sing 320 n n N7N H72N NAD sing 321 n n C4N C5N NAD doub 322 n y C4N H4N NAD sing 323 n n C5N C6N NAD sing 324 n y C5N H5N NAD sing 325 n n C6N H6N NAD sing 326 n n # _atom_sites.entry_id 6QUN _atom_sites.fract_transf_matrix[1][1] 0.012874 _atom_sites.fract_transf_matrix[1][2] 0.007433 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014865 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD O 1 401 335 NAD NAD . D 3 SO4 O 1 402 336 SO4 SO4 . E 3 SO4 O 1 403 337 SO4 SO4 . F 3 SO4 O 1 404 1 SO4 SO4 . G 2 NAD R 1 401 335 NAD NAD . H 3 SO4 R 1 402 336 SO4 SO4 . I 3 SO4 R 1 403 337 SO4 SO4 . J 3 SO4 R 1 404 2 SO4 SO4 . K 3 SO4 R 1 405 3 SO4 SO4 . L 4 HOH O 1 501 24 HOH HOH . L 4 HOH O 2 502 1 HOH HOH . L 4 HOH O 3 503 33 HOH HOH . L 4 HOH O 4 504 14 HOH HOH . L 4 HOH O 5 505 4 HOH HOH . L 4 HOH O 6 506 8 HOH HOH . L 4 HOH O 7 507 20 HOH HOH . L 4 HOH O 8 508 23 HOH HOH . L 4 HOH O 9 509 19 HOH HOH . L 4 HOH O 10 510 29 HOH HOH . L 4 HOH O 11 511 12 HOH HOH . L 4 HOH O 12 512 18 HOH HOH . L 4 HOH O 13 513 13 HOH HOH . L 4 HOH O 14 514 15 HOH HOH . M 4 HOH R 1 501 16 HOH HOH . M 4 HOH R 2 502 27 HOH HOH . M 4 HOH R 3 503 2 HOH HOH . M 4 HOH R 4 504 7 HOH HOH . M 4 HOH R 5 505 10 HOH HOH . M 4 HOH R 6 506 6 HOH HOH . M 4 HOH R 7 507 26 HOH HOH . M 4 HOH R 8 508 11 HOH HOH . M 4 HOH R 9 509 17 HOH HOH . M 4 HOH R 10 510 28 HOH HOH . M 4 HOH R 11 511 21 HOH HOH . M 4 HOH R 12 512 9 HOH HOH . M 4 HOH R 13 513 3 HOH HOH . M 4 HOH R 14 514 31 HOH HOH . M 4 HOH R 15 515 30 HOH HOH . M 4 HOH R 16 516 22 HOH HOH . M 4 HOH R 17 517 25 HOH HOH . M 4 HOH R 18 518 5 HOH HOH . M 4 HOH R 19 519 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . C 2 39.336 44.609 245.021 1 45.71 ? PA NAD 401 O 1 HETATM 2 O O1A NAD . . . C 2 38.616 44.747 243.733 1 55.89 ? O1A NAD 401 O 1 HETATM 3 O O2A NAD . . . C 2 39.145 43.266 245.611 1 44.48 ? O2A NAD 401 O 1 HETATM 4 O O5B NAD . . . C 2 38.848 45.771 246.014 1 49.43 ? O5B NAD 401 O 1 HETATM 5 C C5B NAD . . . C 2 38.285 46.977 245.557 1 51.28 ? C5B NAD 401 O 1 HETATM 6 C C4B NAD . . . C 2 36.965 47.124 246.304 1 55.16 ? C4B NAD 401 O 1 HETATM 7 O O4B NAD . . . C 2 36.568 48.476 246.404 1 52.35 ? O4B NAD 401 O 1 HETATM 8 C C3B NAD . . . C 2 35.85 46.376 245.584 1 69.18 ? C3B NAD 401 O 1 HETATM 9 O O3B NAD . . . C 2 35.356 45.338 246.4 1 69.75 ? O3B NAD 401 O 1 HETATM 10 C C2B NAD . . . C 2 34.769 47.409 245.339 1 74.65 ? C2B NAD 401 O 1 HETATM 11 O O2B NAD . . . C 2 33.508 46.9 245.705 1 82.81 ? O2B NAD 401 O 1 HETATM 12 C C1B NAD . . . C 2 35.168 48.568 246.236 1 62.02 ? C1B NAD 401 O 1 HETATM 13 N N9A NAD . . . C 2 34.819 49.86 245.629 1 70.11 ? N9A NAD 401 O 1 HETATM 14 C C8A NAD . . . C 2 34.869 50.169 244.297 1 72.54 ? C8A NAD 401 O 1 HETATM 15 N N7A NAD . . . C 2 34.48 51.456 244.148 1 79.48 ? N7A NAD 401 O 1 HETATM 16 C C5A NAD . . . C 2 34.188 51.973 245.365 1 82.77 ? C5A NAD 401 O 1 HETATM 17 C C6A NAD . . . C 2 33.75 53.228 245.777 1 85.53 ? C6A NAD 401 O 1 HETATM 18 N N6A NAD . . . C 2 33.78 54.259 244.938 1 87.89 ? N6A NAD 401 O 1 HETATM 19 N N1A NAD . . . C 2 33.533 53.461 247.119 1 85.64 ? N1A NAD 401 O 1 HETATM 20 C C2A NAD . . . C 2 33.754 52.459 248.04 1 90.69 ? C2A NAD 401 O 1 HETATM 21 N N3A NAD . . . C 2 34.184 51.217 247.622 1 90.37 ? N3A NAD 401 O 1 HETATM 22 C C4A NAD . . . C 2 34.399 50.976 246.306 1 81.03 ? C4A NAD 401 O 1 HETATM 23 O O3 NAD . . . C 2 40.897 44.939 244.828 1 69.82 ? O3 NAD 401 O 1 HETATM 24 P PN NAD . . . C 2 41.957 44.608 245.996 1 65.02 ? PN NAD 401 O 1 HETATM 25 O O1N NAD . . . C 2 42.656 43.344 245.667 1 60.91 ? O1N NAD 401 O 1 HETATM 26 O O2N NAD . . . C 2 41.29 44.773 247.308 1 73.59 ? O2N NAD 401 O 1 HETATM 27 O O5D NAD . . . C 2 42.978 45.831 245.775 1 54.5 ? O5D NAD 401 O 1 HETATM 28 C C5D NAD . . . C 2 42.52 47.161 245.889 1 50.19 ? C5D NAD 401 O 1 HETATM 29 C C4D NAD . . . C 2 43.722 48.071 246.074 1 53.22 ? C4D NAD 401 O 1 HETATM 30 O O4D NAD . . . C 2 44.657 47.421 246.911 1 62.6 ? O4D NAD 401 O 1 HETATM 31 C C3D NAD . . . C 2 44.419 48.316 244.744 1 49.93 ? C3D NAD 401 O 1 HETATM 32 O O3D NAD . . . C 2 44.846 49.655 244.709 1 50.49 ? O3D NAD 401 O 1 HETATM 33 C C2D NAD . . . C 2 45.622 47.407 244.793 1 56.86 ? C2D NAD 401 O 1 HETATM 34 O O2D NAD . . . C 2 46.694 47.976 244.082 1 47.26 ? O2D NAD 401 O 1 HETATM 35 C C1D NAD . . . C 2 45.921 47.398 246.277 1 61.02 ? C1D NAD 401 O 1 HETATM 36 N N1N NAD . . . C 2 46.701 46.223 246.697 1 56.58 ? N1N NAD 401 O 1 HETATM 37 C C2N NAD . . . C 2 46.159 44.984 246.513 1 49.7 ? C2N NAD 401 O 1 HETATM 38 C C3N NAD . . . C 2 46.856 43.846 246.896 1 58.02 ? C3N NAD 401 O 1 HETATM 39 C C7N NAD . . . C 2 46.416 42.504 246.388 1 61.5 ? C7N NAD 401 O 1 HETATM 40 O O7N NAD . . . C 2 47.317 41.419 246.422 1 60.15 ? O7N NAD 401 O 1 HETATM 41 N N7N NAD . . . C 2 45.177 42.376 245.916 1 59.86 ? N7N NAD 401 O 1 HETATM 42 C C4N NAD . . . C 2 48.112 43.988 247.471 1 62.55 ? C4N NAD 401 O 1 HETATM 43 C C5N NAD . . . C 2 48.655 45.255 247.651 1 58.68 ? C5N NAD 401 O 1 HETATM 44 C C6N NAD . . . C 2 47.935 46.377 247.26 1 52.17 ? C6N NAD 401 O 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #