data_6QUN # _model_server_result.job_id FBpkbplFk1IIo8jrLNSFPQ _model_server_result.datetime_utc '2025-07-03 11:54:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qun # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 6QUN # _exptl.entry_id 6QUN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6QUN _cell.length_a 77.677 _cell.length_b 77.677 _cell.length_c 407.346 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QUN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_556 x,x-y,-z+7/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 475.237 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 151 O SER 148 1_555 A N CSD 152 O CSD 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSD 152 O CSD 149 1_555 A N THR 153 O THR 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 B C SER 151 R SER 148 1_555 B N CSD 152 R CSD 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C CSD 152 R CSD 149 1_555 B N THR 153 R THR 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 252 n n PA O2A NAD sing 253 n n PA O5B NAD sing 254 n n PA O3 NAD sing 255 n n O2A HOA2 NAD sing 256 n n O5B C5B NAD sing 257 n n C5B C4B NAD sing 258 n n C5B H51A NAD sing 259 n n C5B H52A NAD sing 260 n n C4B O4B NAD sing 261 n n C4B C3B NAD sing 262 n n C4B H4B NAD sing 263 n n O4B C1B NAD sing 264 n n C3B O3B NAD sing 265 n n C3B C2B NAD sing 266 n n C3B H3B NAD sing 267 n n O3B HO3A NAD sing 268 n n C2B O2B NAD sing 269 n n C2B C1B NAD sing 270 n n C2B H2B NAD sing 271 n n O2B HO2A NAD sing 272 n n C1B N9A NAD sing 273 n n C1B H1B NAD sing 274 n n N9A C8A NAD sing 275 n y N9A C4A NAD sing 276 n y C8A N7A NAD doub 277 n y C8A H8A NAD sing 278 n n N7A C5A NAD sing 279 n y C5A C6A NAD sing 280 n y C5A C4A NAD doub 281 n y C6A N6A NAD sing 282 n n C6A N1A NAD doub 283 n y N6A H61A NAD sing 284 n n N6A H62A NAD sing 285 n n N1A C2A NAD sing 286 n y C2A N3A NAD doub 287 n y C2A H2A NAD sing 288 n n N3A C4A NAD sing 289 n y O3 PN NAD sing 290 n n PN O1N NAD doub 291 n n PN O2N NAD sing 292 n n PN O5D NAD sing 293 n n O5D C5D NAD sing 294 n n C5D C4D NAD sing 295 n n C5D H51N NAD sing 296 n n C5D H52N NAD sing 297 n n C4D O4D NAD sing 298 n n C4D C3D NAD sing 299 n n C4D H4D NAD sing 300 n n O4D C1D NAD sing 301 n n C3D O3D NAD sing 302 n n C3D C2D NAD sing 303 n n C3D H3D NAD sing 304 n n O3D HO3N NAD sing 305 n n C2D O2D NAD sing 306 n n C2D C1D NAD sing 307 n n C2D H2D NAD sing 308 n n O2D HO2N NAD sing 309 n n C1D N1N NAD sing 310 n n C1D H1D NAD sing 311 n n N1N C2N NAD sing 312 n y N1N C6N NAD doub 313 n y C2N C3N NAD doub 314 n y C2N H2N NAD sing 315 n n C3N C7N NAD sing 316 n n C3N C4N NAD sing 317 n y C7N O7N NAD doub 318 n n C7N N7N NAD sing 319 n n N7N H71N NAD sing 320 n n N7N H72N NAD sing 321 n n C4N C5N NAD doub 322 n y C4N H4N NAD sing 323 n n C5N C6N NAD sing 324 n y C5N H5N NAD sing 325 n n C6N H6N NAD sing 326 n n # _atom_sites.entry_id 6QUN _atom_sites.fract_transf_matrix[1][1] 0.012874 _atom_sites.fract_transf_matrix[1][2] 0.007433 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014865 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD O 1 401 335 NAD NAD . D 3 SO4 O 1 402 336 SO4 SO4 . E 3 SO4 O 1 403 337 SO4 SO4 . F 3 SO4 O 1 404 1 SO4 SO4 . G 2 NAD R 1 401 335 NAD NAD . H 3 SO4 R 1 402 336 SO4 SO4 . I 3 SO4 R 1 403 337 SO4 SO4 . J 3 SO4 R 1 404 2 SO4 SO4 . K 3 SO4 R 1 405 3 SO4 SO4 . L 4 HOH O 1 501 24 HOH HOH . L 4 HOH O 2 502 1 HOH HOH . L 4 HOH O 3 503 33 HOH HOH . L 4 HOH O 4 504 14 HOH HOH . L 4 HOH O 5 505 4 HOH HOH . L 4 HOH O 6 506 8 HOH HOH . L 4 HOH O 7 507 20 HOH HOH . L 4 HOH O 8 508 23 HOH HOH . L 4 HOH O 9 509 19 HOH HOH . L 4 HOH O 10 510 29 HOH HOH . L 4 HOH O 11 511 12 HOH HOH . L 4 HOH O 12 512 18 HOH HOH . L 4 HOH O 13 513 13 HOH HOH . L 4 HOH O 14 514 15 HOH HOH . M 4 HOH R 1 501 16 HOH HOH . M 4 HOH R 2 502 27 HOH HOH . M 4 HOH R 3 503 2 HOH HOH . M 4 HOH R 4 504 7 HOH HOH . M 4 HOH R 5 505 10 HOH HOH . M 4 HOH R 6 506 6 HOH HOH . M 4 HOH R 7 507 26 HOH HOH . M 4 HOH R 8 508 11 HOH HOH . M 4 HOH R 9 509 17 HOH HOH . M 4 HOH R 10 510 28 HOH HOH . M 4 HOH R 11 511 21 HOH HOH . M 4 HOH R 12 512 9 HOH HOH . M 4 HOH R 13 513 3 HOH HOH . M 4 HOH R 14 514 31 HOH HOH . M 4 HOH R 15 515 30 HOH HOH . M 4 HOH R 16 516 22 HOH HOH . M 4 HOH R 17 517 25 HOH HOH . M 4 HOH R 18 518 5 HOH HOH . M 4 HOH R 19 519 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . G 2 32.427 38.37 226.925 1 63.61 ? PA NAD 401 R 1 HETATM 2 O O1A NAD . . . G 2 32.646 39.219 228.117 1 81.52 ? O1A NAD 401 R 1 HETATM 3 O O2A NAD . . . G 2 33.678 37.711 226.487 1 50.89 ? O2A NAD 401 R 1 HETATM 4 O O5B NAD . . . G 2 31.77 39.228 225.74 1 64.45 ? O5B NAD 401 R 1 HETATM 5 C C5B NAD . . . G 2 31.01 40.398 225.933 1 60.77 ? C5B NAD 401 R 1 HETATM 6 C C4B NAD . . . G 2 31.63 41.455 225.03 1 51.34 ? C4B NAD 401 R 1 HETATM 7 O O4B NAD . . . G 2 30.692 42.437 224.657 1 56.05 ? O4B NAD 401 R 1 HETATM 8 C C3B NAD . . . G 2 32.779 42.168 225.728 1 50.64 ? C3B NAD 401 R 1 HETATM 9 O O3B NAD . . . G 2 33.988 41.908 225.055 1 49.48 ? O3B NAD 401 R 1 HETATM 10 C C2B NAD . . . G 2 32.429 43.64 225.65 1 52.62 ? C2B NAD 401 R 1 HETATM 11 O O2B NAD . . . G 2 33.542 44.372 225.199 1 53.18 ? O2B NAD 401 R 1 HETATM 12 C C1B NAD . . . G 2 31.309 43.703 224.626 1 56.47 ? C1B NAD 401 R 1 HETATM 13 N N9A NAD . . . G 2 30.294 44.713 224.952 1 58.6 ? N9A NAD 401 R 1 HETATM 14 C C8A NAD . . . G 2 29.859 45.089 226.195 1 60.52 ? C8A NAD 401 R 1 HETATM 15 N N7A NAD . . . G 2 28.909 46.039 226.041 1 60.67 ? N7A NAD 401 R 1 HETATM 16 C C5A NAD . . . G 2 28.727 46.264 224.721 1 67.59 ? C5A NAD 401 R 1 HETATM 17 C C6A NAD . . . G 2 27.886 47.12 224.023 1 85.53 ? C6A NAD 401 R 1 HETATM 18 N N6A NAD . . . G 2 26.941 47.788 224.677 1 94.7 ? N6A NAD 401 R 1 HETATM 19 N N1A NAD . . . G 2 27.918 47.137 222.643 1 85.17 ? N1A NAD 401 R 1 HETATM 20 C C2A NAD . . . G 2 28.781 46.299 221.967 1 85.27 ? C2A NAD 401 R 1 HETATM 21 N N3A NAD . . . G 2 29.617 45.457 222.671 1 74.93 ? N3A NAD 401 R 1 HETATM 22 C C4A NAD . . . G 2 29.592 45.437 224.025 1 66.38 ? C4A NAD 401 R 1 HETATM 23 O O3 NAD . . . G 2 31.272 37.289 227.205 1 62.49 ? O3 NAD 401 R 1 HETATM 24 P PN NAD . . . G 2 31.077 36.068 226.181 1 58.8 ? PN NAD 401 R 1 HETATM 25 O O1N NAD . . . G 2 31.709 34.866 226.768 1 55.93 ? O1N NAD 401 R 1 HETATM 26 O O2N NAD . . . G 2 31.444 36.532 224.824 1 61.97 ? O2N NAD 401 R 1 HETATM 27 O O5D NAD . . . G 2 29.486 35.858 226.233 1 56.05 ? O5D NAD 401 R 1 HETATM 28 C C5D NAD . . . G 2 28.617 36.904 225.864 1 57.93 ? C5D NAD 401 R 1 HETATM 29 C C4D NAD . . . G 2 27.27 36.283 225.548 1 57.4 ? C4D NAD 401 R 1 HETATM 30 O O4D NAD . . . G 2 27.529 35.062 224.886 1 59.14 ? O4D NAD 401 R 1 HETATM 31 C C3D NAD . . . G 2 26.499 35.95 226.817 1 59.81 ? C3D NAD 401 R 1 HETATM 32 O O3D NAD . . . G 2 25.137 36.219 226.594 1 72.87 ? O3D NAD 401 R 1 HETATM 33 C C2D NAD . . . G 2 26.711 34.465 226.976 1 52.24 ? C2D NAD 401 R 1 HETATM 34 O O2D NAD . . . G 2 25.572 33.88 227.552 1 52.36 ? O2D NAD 401 R 1 HETATM 35 C C1D NAD . . . G 2 26.836 34.019 225.537 1 55.77 ? C1D NAD 401 R 1 HETATM 36 N N1N NAD . . . G 2 27.554 32.744 225.406 1 52.98 ? N1N NAD 401 R 1 HETATM 37 C C2N NAD . . . G 2 28.838 32.652 225.855 1 51.9 ? C2N NAD 401 R 1 HETATM 38 C C3N NAD . . . G 2 29.525 31.454 225.728 1 46.51 ? C3N NAD 401 R 1 HETATM 39 C C7N NAD . . . G 2 30.932 31.344 226.216 1 44.67 ? C7N NAD 401 R 1 HETATM 40 O O7N NAD . . . G 2 31.467 30.063 226.456 1 48.21 ? O7N NAD 401 R 1 HETATM 41 N N7N NAD . . . G 2 31.625 32.463 226.406 1 49.86 ? N7N NAD 401 R 1 HETATM 42 C C4N NAD . . . G 2 28.914 30.356 225.143 1 47.06 ? C4N NAD 401 R 1 HETATM 43 C C5N NAD . . . G 2 27.61 30.469 224.689 1 48.94 ? C5N NAD 401 R 1 HETATM 44 C C6N NAD . . . G 2 26.938 31.677 224.824 1 50.25 ? C6N NAD 401 R 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #