data_6QV0
#
_model_server_result.job_id            vM76bNTisHfT8iV0XiFQEA 
_model_server_result.datetime_utc      '2024-11-04 22:40:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qv0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":600}' 
#
_entry.id    6QV0 
#
_exptl.entry_id    6QV0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.55 
_cell.angle_gamma         90 
_cell.entry_id            6QV0 
_cell.length_a            166.28 
_cell.length_b            77.29 
_cell.length_c            207.18 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QV0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,H,I,J 1 1 
C,D,F,K,L,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 I N N 
? 4 K N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 25 E CYS 22 1_555 E SG CYS 99 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 F SG CYS 25 F CYS 22 1_555 F SG CYS 99 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc1 A OG SER 383 A SER 373 1_555 H MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
metalc ? metalc2 A OE1 GLN 424 A GLN 414 1_555 H MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? 
metalc ? metalc3 B OG1 THR 395 B THR 395 1_555 J MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? 
metalc ? metalc4 B OE1 GLN 436 B GLN 436 1_555 J MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? 
metalc ? metalc5 C OG SER 383 C SER 373 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? 
metalc ? metalc6 C OE1 GLN 424 C GLN 414 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? 
metalc ? metalc7 D OG1 THR 395 D THR 395 1_555 N MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? 
metalc ? metalc8 D OE1 GLN 436 D GLN 436 1_555 N MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? 
metalc ? metalc9 G O2G ATP . A ATP 600 1_555 H MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? 
metalc ? metalc10 G O2B ATP . A ATP 600 1_555 H MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc11 I O1G ATP . B ATP 600 1_555 J MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? 
metalc ? metalc12 I O1B ATP . B ATP 600 1_555 J MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? 
metalc ? metalc13 K O2G ATP . C ATP 600 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? 
metalc ? metalc14 K O2B ATP . C ATP 600 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc15 M O1G ATP . D ATP 600 1_555 N MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc16 M O2B ATP . D ATP 600 1_555 N MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6QV0 
_atom_sites.fract_transf_matrix[1][1]    0.006014 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002497 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012938 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005226 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 ATP A 1 600 600 ATP ATP . 
H 5 MG A 1 601 601 MG MG . 
I 4 ATP B 1 600 600 ATP ATP . 
J 5 MG B 1 601 601 MG MG . 
K 4 ATP C 1 600 600 ATP ATP . 
L 5 MG C 1 601 601 MG MG . 
M 4 ATP D 1 600 600 ATP ATP . 
N 5 MG D 1 601 601 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . M 4 -8.976 21.426 100.513 1 52.64 ? PG ATP 600 D 1 
HETATM 2 O O1G ATP . . . M 4 -9.985 21.345 99.418 1 52.93 ? O1G ATP 600 D 1 
HETATM 3 O O2G ATP . . . M 4 -8.429 22.839 100.732 1 52.81 ? O2G ATP 600 D 1 
HETATM 4 O O3G ATP . . . M 4 -9.49 20.888 101.857 1 53.28 ? O3G ATP 600 D 1 
HETATM 5 P PB ATP . . . M 4 -7.659 19.198 99.221 1 46.2 ? PB ATP 600 D 1 
HETATM 6 O O1B ATP . . . M 4 -7.056 18.094 99.998 1 46.9 ? O1B ATP 600 D 1 
HETATM 7 O O2B ATP . . . M 4 -9.073 18.829 98.785 1 45.54 ? O2B ATP 600 D 1 
HETATM 8 O O3B ATP . . . M 4 -7.734 20.516 100.11 1 49.72 ? O3B ATP 600 D 1 
HETATM 9 P PA ATP . . . M 4 -7.087 19.351 96.378 1 43.99 ? PA ATP 600 D 1 
HETATM 10 O O1A ATP . . . M 4 -8.306 20.114 96.022 1 43.47 ? O1A ATP 600 D 1 
HETATM 11 O O2A ATP . . . M 4 -7.344 17.878 96.106 1 44.91 ? O2A ATP 600 D 1 
HETATM 12 O O3A ATP . . . M 4 -6.779 19.5 97.932 1 44.37 ? O3A ATP 600 D 1 
HETATM 13 O O5' ATP . . . M 4 -5.757 19.796 95.607 1 43.75 ? O5' ATP 600 D 1 
HETATM 14 C C5' ATP . . . M 4 -4.432 19.444 96.051 1 45.01 ? C5' ATP 600 D 1 
HETATM 15 C C4' ATP . . . M 4 -3.424 20.166 95.19 1 47.35 ? C4' ATP 600 D 1 
HETATM 16 O O4' ATP . . . M 4 -3.818 20.097 93.803 1 49.25 ? O4' ATP 600 D 1 
HETATM 17 C C3' ATP . . . M 4 -3.168 21.638 95.509 1 48.42 ? C3' ATP 600 D 1 
HETATM 18 O O3' ATP . . . M 4 -1.773 21.911 95.553 1 48.8 ? O3' ATP 600 D 1 
HETATM 19 C C2' ATP . . . M 4 -3.898 22.386 94.386 1 49.37 ? C2' ATP 600 D 1 
HETATM 20 O O2' ATP . . . M 4 -3.22 23.584 94.022 1 49.3 ? O2' ATP 600 D 1 
HETATM 21 C C1' ATP . . . M 4 -3.839 21.389 93.228 1 50.77 ? C1' ATP 600 D 1 
HETATM 22 N N9 ATP . . . M 4 -4.97 21.47 92.303 1 53.02 ? N9 ATP 600 D 1 
HETATM 23 C C8 ATP . . . M 4 -6.26 21.068 92.535 1 53.67 ? C8 ATP 600 D 1 
HETATM 24 N N7 ATP . . . M 4 -7.06 21.214 91.506 1 54.05 ? N7 ATP 600 D 1 
HETATM 25 C C5 ATP . . . M 4 -6.24 21.752 90.525 1 54.55 ? C5 ATP 600 D 1 
HETATM 26 C C6 ATP . . . M 4 -6.48 22.126 89.185 1 55 ? C6 ATP 600 D 1 
HETATM 27 N N6 ATP . . . M 4 -7.66 21.993 88.576 1 54.82 ? N6 ATP 600 D 1 
HETATM 28 N N1 ATP . . . M 4 -5.444 22.637 88.48 1 55.39 ? N1 ATP 600 D 1 
HETATM 29 C C2 ATP . . . M 4 -4.252 22.757 89.078 1 55.43 ? C2 ATP 600 D 1 
HETATM 30 N N3 ATP . . . M 4 -3.905 22.428 90.328 1 54.95 ? N3 ATP 600 D 1 
HETATM 31 C C4 ATP . . . M 4 -4.95 21.924 91.005 1 54.2 ? C4 ATP 600 D 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#