data_6QVT # _model_server_result.job_id qsgmq_yzSD9KoDf3w9FSZw _model_server_result.datetime_utc '2024-12-23 06:55:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qvt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 6QVT # _exptl.entry_id 6QVT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.39 _cell.angle_gamma 90 _cell.entry_id 6QVT _cell.length_a 136.661 _cell.length_b 93.921 _cell.length_c 63.718 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QVT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 142 1_555 A SG CYS 275 A CYS 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 53 A CYS 184 1_555 A SG CYS 204 A CYS 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf3 A SG CYS 222 A CYS 353 1_555 A SG CYS 233 A CYS 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf4 B SG CYS 11 B CYS 142 1_555 B SG CYS 275 B CYS 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf5 B SG CYS 53 B CYS 184 1_555 B SG CYS 204 B CYS 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf6 B SG CYS 222 B CYS 353 1_555 B SG CYS 233 B CYS 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 311 n n C1 C2 PEG sing 312 n n C1 H11 PEG sing 313 n n C1 H12 PEG sing 314 n n O1 HO1 PEG sing 315 n n C2 O2 PEG sing 316 n n C2 H21 PEG sing 317 n n C2 H22 PEG sing 318 n n O2 C3 PEG sing 319 n n C3 C4 PEG sing 320 n n C3 H31 PEG sing 321 n n C3 H32 PEG sing 322 n n C4 O4 PEG sing 323 n n C4 H41 PEG sing 324 n n C4 H42 PEG sing 325 n n O4 HO4 PEG sing 326 n n # _atom_sites.entry_id 6QVT _atom_sites.fract_transf_matrix[1][1] 0.007317 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000562 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01574 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NCC A 1 501 501 NCC NCC . D 3 PEG A 1 502 502 PEG PEG . E 2 NCC B 1 501 501 NCC NCC . F 3 PEG B 1 502 502 PEG PEG . G 4 HOH A 1 601 609 HOH HOH . G 4 HOH A 2 602 688 HOH HOH . G 4 HOH A 3 603 603 HOH HOH . G 4 HOH A 4 604 601 HOH HOH . G 4 HOH A 5 605 602 HOH HOH . G 4 HOH A 6 606 604 HOH HOH . G 4 HOH A 7 607 610 HOH HOH . G 4 HOH A 8 608 606 HOH HOH . G 4 HOH A 9 609 615 HOH HOH . G 4 HOH A 10 610 607 HOH HOH . G 4 HOH A 11 611 612 HOH HOH . G 4 HOH A 12 612 605 HOH HOH . G 4 HOH A 13 613 619 HOH HOH . G 4 HOH A 14 614 608 HOH HOH . G 4 HOH A 15 615 614 HOH HOH . G 4 HOH A 16 616 613 HOH HOH . G 4 HOH A 17 617 611 HOH HOH . G 4 HOH A 18 618 625 HOH HOH . G 4 HOH A 19 619 616 HOH HOH . G 4 HOH A 20 620 630 HOH HOH . G 4 HOH A 21 621 617 HOH HOH . G 4 HOH A 22 622 618 HOH HOH . G 4 HOH A 23 623 626 HOH HOH . G 4 HOH A 24 624 622 HOH HOH . G 4 HOH A 25 625 621 HOH HOH . G 4 HOH A 26 626 634 HOH HOH . G 4 HOH A 27 627 629 HOH HOH . G 4 HOH A 28 628 623 HOH HOH . G 4 HOH A 29 629 628 HOH HOH . G 4 HOH A 30 630 642 HOH HOH . G 4 HOH A 31 631 627 HOH HOH . G 4 HOH A 32 632 620 HOH HOH . G 4 HOH A 33 633 650 HOH HOH . G 4 HOH A 34 634 636 HOH HOH . G 4 HOH A 35 635 638 HOH HOH . G 4 HOH A 36 636 632 HOH HOH . G 4 HOH A 37 637 640 HOH HOH . G 4 HOH A 38 638 639 HOH HOH . G 4 HOH A 39 639 680 HOH HOH . G 4 HOH A 40 640 648 HOH HOH . G 4 HOH A 41 641 665 HOH HOH . G 4 HOH A 42 642 652 HOH HOH . G 4 HOH A 43 643 644 HOH HOH . G 4 HOH A 44 644 653 HOH HOH . G 4 HOH A 45 645 643 HOH HOH . G 4 HOH A 46 646 645 HOH HOH . G 4 HOH A 47 647 649 HOH HOH . G 4 HOH A 48 648 662 HOH HOH . G 4 HOH A 49 649 641 HOH HOH . G 4 HOH A 50 650 635 HOH HOH . G 4 HOH A 51 651 661 HOH HOH . G 4 HOH A 52 652 637 HOH HOH . G 4 HOH A 53 653 624 HOH HOH . G 4 HOH A 54 654 668 HOH HOH . G 4 HOH A 55 655 646 HOH HOH . G 4 HOH A 56 656 659 HOH HOH . G 4 HOH A 57 657 651 HOH HOH . G 4 HOH A 58 658 633 HOH HOH . G 4 HOH A 59 659 647 HOH HOH . G 4 HOH A 60 660 657 HOH HOH . G 4 HOH A 61 661 674 HOH HOH . G 4 HOH A 62 662 667 HOH HOH . G 4 HOH A 63 663 654 HOH HOH . G 4 HOH A 64 664 678 HOH HOH . G 4 HOH A 65 665 663 HOH HOH . G 4 HOH A 66 666 669 HOH HOH . G 4 HOH A 67 667 660 HOH HOH . G 4 HOH A 68 668 656 HOH HOH . G 4 HOH A 69 669 658 HOH HOH . G 4 HOH A 70 670 676 HOH HOH . G 4 HOH A 71 671 671 HOH HOH . G 4 HOH A 72 672 670 HOH HOH . G 4 HOH A 73 673 675 HOH HOH . G 4 HOH A 74 674 673 HOH HOH . G 4 HOH A 75 675 687 HOH HOH . G 4 HOH A 76 676 677 HOH HOH . G 4 HOH A 77 677 672 HOH HOH . G 4 HOH A 78 678 683 HOH HOH . G 4 HOH A 79 679 703 HOH HOH . G 4 HOH A 80 680 655 HOH HOH . G 4 HOH A 81 681 682 HOH HOH . G 4 HOH A 82 682 679 HOH HOH . G 4 HOH A 83 683 690 HOH HOH . G 4 HOH A 84 684 685 HOH HOH . G 4 HOH A 85 685 689 HOH HOH . G 4 HOH A 86 686 681 HOH HOH . G 4 HOH A 87 687 664 HOH HOH . G 4 HOH A 88 688 684 HOH HOH . G 4 HOH A 89 689 695 HOH HOH . G 4 HOH A 90 690 697 HOH HOH . G 4 HOH A 91 691 686 HOH HOH . G 4 HOH A 92 692 702 HOH HOH . G 4 HOH A 93 693 691 HOH HOH . G 4 HOH A 94 694 696 HOH HOH . G 4 HOH A 95 695 714 HOH HOH . G 4 HOH A 96 696 700 HOH HOH . G 4 HOH A 97 697 706 HOH HOH . G 4 HOH A 98 698 699 HOH HOH . G 4 HOH A 99 699 698 HOH HOH . G 4 HOH A 100 700 705 HOH HOH . G 4 HOH A 101 701 694 HOH HOH . G 4 HOH A 102 702 692 HOH HOH . G 4 HOH A 103 703 693 HOH HOH . G 4 HOH A 104 704 701 HOH HOH . G 4 HOH A 105 705 708 HOH HOH . G 4 HOH A 106 706 709 HOH HOH . G 4 HOH A 107 707 712 HOH HOH . G 4 HOH A 108 708 710 HOH HOH . G 4 HOH A 109 709 713 HOH HOH . G 4 HOH A 110 710 704 HOH HOH . G 4 HOH A 111 711 711 HOH HOH . G 4 HOH A 112 712 707 HOH HOH . G 4 HOH A 113 713 721 HOH HOH . G 4 HOH A 114 714 719 HOH HOH . G 4 HOH A 115 715 631 HOH HOH . G 4 HOH A 116 716 718 HOH HOH . G 4 HOH A 117 717 716 HOH HOH . G 4 HOH A 118 718 720 HOH HOH . G 4 HOH A 119 719 722 HOH HOH . G 4 HOH A 120 720 726 HOH HOH . G 4 HOH A 121 721 724 HOH HOH . G 4 HOH A 122 722 725 HOH HOH . G 4 HOH A 123 723 723 HOH HOH . G 4 HOH A 124 724 728 HOH HOH . G 4 HOH A 125 725 729 HOH HOH . G 4 HOH A 126 726 727 HOH HOH . G 4 HOH A 127 727 732 HOH HOH . G 4 HOH A 128 728 730 HOH HOH . G 4 HOH A 129 729 734 HOH HOH . G 4 HOH A 130 730 731 HOH HOH . G 4 HOH A 131 731 733 HOH HOH . G 4 HOH A 132 732 735 HOH HOH . G 4 HOH A 133 733 736 HOH HOH . G 4 HOH A 134 734 738 HOH HOH . G 4 HOH A 135 735 717 HOH HOH . G 4 HOH A 136 736 737 HOH HOH . G 4 HOH A 137 737 739 HOH HOH . G 4 HOH A 138 738 740 HOH HOH . G 4 HOH A 139 739 741 HOH HOH . H 4 HOH B 1 601 602 HOH HOH . H 4 HOH B 2 602 601 HOH HOH . H 4 HOH B 3 603 603 HOH HOH . H 4 HOH B 4 604 604 HOH HOH . H 4 HOH B 5 605 616 HOH HOH . H 4 HOH B 6 606 607 HOH HOH . H 4 HOH B 7 607 605 HOH HOH . H 4 HOH B 8 608 613 HOH HOH . H 4 HOH B 9 609 611 HOH HOH . H 4 HOH B 10 610 610 HOH HOH . H 4 HOH B 11 611 614 HOH HOH . H 4 HOH B 12 612 608 HOH HOH . H 4 HOH B 13 613 609 HOH HOH . H 4 HOH B 14 614 618 HOH HOH . H 4 HOH B 15 615 615 HOH HOH . H 4 HOH B 16 616 620 HOH HOH . H 4 HOH B 17 617 619 HOH HOH . H 4 HOH B 18 618 617 HOH HOH . H 4 HOH B 19 619 621 HOH HOH . H 4 HOH B 20 620 606 HOH HOH . H 4 HOH B 21 621 612 HOH HOH . H 4 HOH B 22 622 622 HOH HOH . H 4 HOH B 23 623 626 HOH HOH . H 4 HOH B 24 624 624 HOH HOH . H 4 HOH B 25 625 628 HOH HOH . H 4 HOH B 26 626 633 HOH HOH . H 4 HOH B 27 627 627 HOH HOH . H 4 HOH B 28 628 632 HOH HOH . H 4 HOH B 29 629 631 HOH HOH . H 4 HOH B 30 630 629 HOH HOH . H 4 HOH B 31 631 625 HOH HOH . H 4 HOH B 32 632 634 HOH HOH . H 4 HOH B 33 633 630 HOH HOH . H 4 HOH B 34 634 667 HOH HOH . H 4 HOH B 35 635 641 HOH HOH . H 4 HOH B 36 636 635 HOH HOH . H 4 HOH B 37 637 636 HOH HOH . H 4 HOH B 38 638 642 HOH HOH . H 4 HOH B 39 639 652 HOH HOH . H 4 HOH B 40 640 639 HOH HOH . H 4 HOH B 41 641 640 HOH HOH . H 4 HOH B 42 642 623 HOH HOH . H 4 HOH B 43 643 668 HOH HOH . H 4 HOH B 44 644 654 HOH HOH . H 4 HOH B 45 645 638 HOH HOH . H 4 HOH B 46 646 648 HOH HOH . H 4 HOH B 47 647 637 HOH HOH . H 4 HOH B 48 648 666 HOH HOH . H 4 HOH B 49 649 659 HOH HOH . H 4 HOH B 50 650 658 HOH HOH . H 4 HOH B 51 651 657 HOH HOH . H 4 HOH B 52 652 653 HOH HOH . H 4 HOH B 53 653 644 HOH HOH . H 4 HOH B 54 654 660 HOH HOH . H 4 HOH B 55 655 666 HOH HOH . H 4 HOH B 56 656 655 HOH HOH . H 4 HOH B 57 657 664 HOH HOH . H 4 HOH B 58 658 665 HOH HOH . H 4 HOH B 59 659 646 HOH HOH . H 4 HOH B 60 660 662 HOH HOH . H 4 HOH B 61 661 650 HOH HOH . H 4 HOH B 62 662 649 HOH HOH . H 4 HOH B 63 663 647 HOH HOH . H 4 HOH B 64 664 676 HOH HOH . H 4 HOH B 65 665 663 HOH HOH . H 4 HOH B 66 666 671 HOH HOH . H 4 HOH B 67 667 672 HOH HOH . H 4 HOH B 68 668 674 HOH HOH . H 4 HOH B 69 669 643 HOH HOH . H 4 HOH B 70 670 645 HOH HOH . H 4 HOH B 71 671 656 HOH HOH . H 4 HOH B 72 672 682 HOH HOH . H 4 HOH B 73 673 670 HOH HOH . H 4 HOH B 74 674 673 HOH HOH . H 4 HOH B 75 675 677 HOH HOH . H 4 HOH B 76 676 669 HOH HOH . H 4 HOH B 77 677 684 HOH HOH . H 4 HOH B 78 678 683 HOH HOH . H 4 HOH B 79 679 687 HOH HOH . H 4 HOH B 80 680 680 HOH HOH . H 4 HOH B 81 681 681 HOH HOH . H 4 HOH B 82 682 688 HOH HOH . H 4 HOH B 83 683 679 HOH HOH . H 4 HOH B 84 684 675 HOH HOH . H 4 HOH B 85 685 685 HOH HOH . H 4 HOH B 86 686 686 HOH HOH . H 4 HOH B 87 687 689 HOH HOH . H 4 HOH B 88 688 695 HOH HOH . H 4 HOH B 89 689 690 HOH HOH . H 4 HOH B 90 690 697 HOH HOH . H 4 HOH B 91 691 691 HOH HOH . H 4 HOH B 92 692 692 HOH HOH . H 4 HOH B 93 693 693 HOH HOH . H 4 HOH B 94 694 651 HOH HOH . H 4 HOH B 95 695 700 HOH HOH . H 4 HOH B 96 696 698 HOH HOH . H 4 HOH B 97 697 661 HOH HOH . H 4 HOH B 98 698 699 HOH HOH . H 4 HOH B 99 699 701 HOH HOH . H 4 HOH B 100 700 696 HOH HOH . H 4 HOH B 101 701 702 HOH HOH . H 4 HOH B 102 702 710 HOH HOH . H 4 HOH B 103 703 703 HOH HOH . H 4 HOH B 104 704 705 HOH HOH . H 4 HOH B 105 705 704 HOH HOH . H 4 HOH B 106 706 707 HOH HOH . H 4 HOH B 107 707 712 HOH HOH . H 4 HOH B 108 708 709 HOH HOH . H 4 HOH B 109 709 708 HOH HOH . H 4 HOH B 110 710 711 HOH HOH . H 4 HOH B 111 711 714 HOH HOH . H 4 HOH B 112 712 706 HOH HOH . H 4 HOH B 113 713 713 HOH HOH . H 4 HOH B 114 714 715 HOH HOH . H 4 HOH B 115 715 716 HOH HOH . H 4 HOH B 116 716 718 HOH HOH . H 4 HOH B 117 717 719 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . F 3 34.024 24.555 87.683 1 47.09 ? C1 PEG 502 B 1 HETATM 2 O O1 PEG . . . F 3 33.34 25.24 86.666 1 49.14 ? O1 PEG 502 B 1 HETATM 3 C C2 PEG . . . F 3 35.446 25.101 87.8 1 52.94 ? C2 PEG 502 B 1 HETATM 4 O O2 PEG . . . F 3 35.4 26.463 88.118 1 53.37 ? O2 PEG 502 B 1 HETATM 5 C C3 PEG . . . F 3 36.199 26.832 89.209 1 52.66 ? C3 PEG 502 B 1 HETATM 6 C C4 PEG . . . F 3 37.618 27.153 88.735 1 64.14 ? C4 PEG 502 B 1 HETATM 7 O O4 PEG . . . F 3 37.59 28.221 87.827 1 58.99 ? O4 PEG 502 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #