data_6QWG # _model_server_result.job_id 1Enxoy25q0bqzzZEsfBjig _model_server_result.datetime_utc '2024-11-07 06:44:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qwg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6QWG # _exptl.entry_id 6QWG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRITE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QWG _cell.length_a 97.6 _cell.length_b 97.6 _cell.length_c 97.6 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QWG _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 z+1/2,-x+1/2,-y 0 0 1 -1 0 0 0 -1 0 48.8 48.8 0 3 'crystal symmetry operation' 12_554 -y+1/2,-z,x-1/2 0 -1 0 0 0 -1 1 0 0 48.8 0 -48.8 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 88 A HIS 95 1_555 C CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc2 A NE2 HIS 93 A HIS 100 1_555 D CU CU . A CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc3 A NE2 HIS 128 A HIS 135 1_555 D CU CU . A CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc4 A SG CYS 129 A CYS 136 1_555 C CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc5 A ND1 HIS 138 A HIS 145 1_555 C CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc6 A SD MET 143 A MET 150 1_555 C CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc7 A NE2 HIS 299 A HIS 306 1_555 D CU CU . A CU 403 12_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc8 B N NO2 . A NO2 401 1_555 D CU CU . A CU 403 12_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc9 B O1 NO2 . A NO2 401 1_555 D CU CU . A CU 403 12_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc10 B O2 NO2 . A NO2 401 1_555 D CU CU . A CU 403 12_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? # _chem_comp.formula 'N O2 -1' _chem_comp.formula_weight 46.005 _chem_comp.id NO2 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRITE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO2 doub 237 n n N O2 NO2 sing 238 n n # _atom_sites.entry_id 6QWG _atom_sites.fract_transf_matrix[1][1] 0.010246 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010246 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO2 A 1 401 401 NO2 NO2 . C 3 CU A 1 402 1 CU CU . D 3 CU A 1 403 2 CU CU . E 4 HOH A 1 501 275 HOH HOH . E 4 HOH A 2 502 259 HOH HOH . E 4 HOH A 3 503 26 HOH HOH . E 4 HOH A 4 504 260 HOH HOH . E 4 HOH A 5 505 254 HOH HOH . E 4 HOH A 6 506 106 HOH HOH . E 4 HOH A 7 507 3 HOH HOH . E 4 HOH A 8 508 251 HOH HOH . E 4 HOH A 9 509 177 HOH HOH . E 4 HOH A 10 510 27 HOH HOH . E 4 HOH A 11 511 263 HOH HOH . E 4 HOH A 12 512 53 HOH HOH . E 4 HOH A 13 513 253 HOH HOH . E 4 HOH A 14 514 264 HOH HOH . E 4 HOH A 15 515 4 HOH HOH . E 4 HOH A 16 516 36 HOH HOH . E 4 HOH A 17 517 267 HOH HOH . E 4 HOH A 18 518 258 HOH HOH . E 4 HOH A 19 519 35 HOH HOH . E 4 HOH A 20 520 266 HOH HOH . E 4 HOH A 21 521 128 HOH HOH . E 4 HOH A 22 522 256 HOH HOH . E 4 HOH A 23 523 15 HOH HOH . E 4 HOH A 24 524 34 HOH HOH . E 4 HOH A 25 525 114 HOH HOH . E 4 HOH A 26 526 10 HOH HOH . E 4 HOH A 27 527 20 HOH HOH . E 4 HOH A 28 528 271 HOH HOH . E 4 HOH A 29 529 278 HOH HOH . E 4 HOH A 30 530 283 HOH HOH . E 4 HOH A 31 531 96 HOH HOH . E 4 HOH A 32 532 18 HOH HOH . E 4 HOH A 33 533 250 HOH HOH . E 4 HOH A 34 534 30 HOH HOH . E 4 HOH A 35 535 126 HOH HOH . E 4 HOH A 36 536 49 HOH HOH . E 4 HOH A 37 537 46 HOH HOH . E 4 HOH A 38 538 78 HOH HOH . E 4 HOH A 39 539 252 HOH HOH . E 4 HOH A 40 540 5 HOH HOH . E 4 HOH A 41 541 93 HOH HOH . E 4 HOH A 42 542 54 HOH HOH . E 4 HOH A 43 543 67 HOH HOH . E 4 HOH A 44 544 13 HOH HOH . E 4 HOH A 45 545 86 HOH HOH . E 4 HOH A 46 546 103 HOH HOH . E 4 HOH A 47 547 274 HOH HOH . E 4 HOH A 48 548 32 HOH HOH . E 4 HOH A 49 549 24 HOH HOH . E 4 HOH A 50 550 255 HOH HOH . E 4 HOH A 51 551 7 HOH HOH . E 4 HOH A 52 552 22 HOH HOH . E 4 HOH A 53 553 63 HOH HOH . E 4 HOH A 54 554 17 HOH HOH . E 4 HOH A 55 555 89 HOH HOH . E 4 HOH A 56 556 119 HOH HOH . E 4 HOH A 57 557 74 HOH HOH . E 4 HOH A 58 558 11 HOH HOH . E 4 HOH A 59 559 38 HOH HOH . E 4 HOH A 60 560 57 HOH HOH . E 4 HOH A 61 561 33 HOH HOH . E 4 HOH A 62 562 43 HOH HOH . E 4 HOH A 63 563 261 HOH HOH . E 4 HOH A 64 564 40 HOH HOH . E 4 HOH A 65 565 21 HOH HOH . E 4 HOH A 66 566 48 HOH HOH . E 4 HOH A 67 567 12 HOH HOH . E 4 HOH A 68 568 101 HOH HOH . E 4 HOH A 69 569 109 HOH HOH . E 4 HOH A 70 570 56 HOH HOH . E 4 HOH A 71 571 60 HOH HOH . E 4 HOH A 72 572 6 HOH HOH . E 4 HOH A 73 573 25 HOH HOH . E 4 HOH A 74 574 72 HOH HOH . E 4 HOH A 75 575 37 HOH HOH . E 4 HOH A 76 576 14 HOH HOH . E 4 HOH A 77 577 85 HOH HOH . E 4 HOH A 78 578 8 HOH HOH . E 4 HOH A 79 579 50 HOH HOH . E 4 HOH A 80 580 108 HOH HOH . E 4 HOH A 81 581 28 HOH HOH . E 4 HOH A 82 582 281 HOH HOH . E 4 HOH A 83 583 279 HOH HOH . E 4 HOH A 84 584 87 HOH HOH . E 4 HOH A 85 585 1 HOH HOH . E 4 HOH A 86 586 41 HOH HOH . E 4 HOH A 87 587 44 HOH HOH . E 4 HOH A 88 588 79 HOH HOH . E 4 HOH A 89 589 282 HOH HOH . E 4 HOH A 90 590 23 HOH HOH . E 4 HOH A 91 591 42 HOH HOH . E 4 HOH A 92 592 39 HOH HOH . E 4 HOH A 93 593 265 HOH HOH . E 4 HOH A 94 594 124 HOH HOH . E 4 HOH A 95 595 19 HOH HOH . E 4 HOH A 96 596 138 HOH HOH . E 4 HOH A 97 597 175 HOH HOH . E 4 HOH A 98 598 262 HOH HOH . E 4 HOH A 99 599 284 HOH HOH . E 4 HOH A 100 600 47 HOH HOH . E 4 HOH A 101 601 91 HOH HOH . E 4 HOH A 102 602 51 HOH HOH . E 4 HOH A 103 603 31 HOH HOH . E 4 HOH A 104 604 269 HOH HOH . E 4 HOH A 105 605 73 HOH HOH . E 4 HOH A 106 606 111 HOH HOH . E 4 HOH A 107 607 280 HOH HOH . E 4 HOH A 108 608 121 HOH HOH . E 4 HOH A 109 609 208 HOH HOH . E 4 HOH A 110 610 90 HOH HOH . E 4 HOH A 111 611 147 HOH HOH . E 4 HOH A 112 612 62 HOH HOH . E 4 HOH A 113 613 29 HOH HOH . E 4 HOH A 114 614 104 HOH HOH . E 4 HOH A 115 615 84 HOH HOH . E 4 HOH A 116 616 268 HOH HOH . E 4 HOH A 117 617 9 HOH HOH . E 4 HOH A 118 618 61 HOH HOH . E 4 HOH A 119 619 185 HOH HOH . E 4 HOH A 120 620 273 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO2 . . . B 2 15.859 8.629 -15.13 1 49.08 ? N NO2 401 A 1 HETATM 2 O O1 NO2 . . . B 2 16.859 7.652 -14.77 1 37.23 ? O1 NO2 401 A 1 HETATM 3 O O2 NO2 . . . B 2 14.998 8.096 -16.168 1 42.13 ? O2 NO2 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 3 #