data_6QZ5 # _model_server_result.job_id kK6-zhbg7VsqWyI1fN1vEw _model_server_result.datetime_utc '2024-12-01 02:02:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qz5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6QZ5 # _exptl.entry_id 6QZ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.533 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{R})-2-[[6-ethyl-5-(1~{H}-indol-4-yl)thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6QZ5 _cell.length_a 39.941 _cell.length_b 39.941 _cell.length_c 326.692 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QZ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H22 N4 O2 S' _chem_comp.formula_weight 442.533 _chem_comp.id JLE _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{R})-2-[[6-ethyl-5-(1~{H}-indol-4-yl)thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 C22 JLE sing 173 n n C21 C20 JLE sing 174 n n C22 C23 JLE doub 175 n y C22 C27 JLE sing 176 n y C23 C24 JLE sing 177 n y C12 C11 JLE doub 178 n y C12 C13 JLE sing 179 n y C27 C26 JLE doub 180 n y O30 C28 JLE doub 181 n n C11 C14 JLE sing 182 n y C24 C25 JLE doub 183 n y C26 C25 JLE sing 184 n y C28 O29 JLE sing 185 n n C28 C20 JLE sing 186 n n C20 N19 JLE sing 187 n n C13 C10 JLE doub 188 n y C14 N18 JLE sing 189 n y C14 C15 JLE doub 190 n y N19 C4 JLE sing 191 n n N18 C17 JLE sing 192 n y C10 C15 JLE sing 193 n y C10 C9 JLE sing 194 n n C15 C16 JLE sing 195 n y C4 N1 JLE doub 196 n y C4 C5 JLE sing 197 n y C17 C16 JLE doub 198 n y N1 C2 JLE sing 199 n y C9 C5 JLE sing 200 n y C9 C8 JLE doub 201 n y C5 C6 JLE doub 202 n y C2 N3 JLE doub 203 n y C8 C31 JLE sing 204 n n C8 S7 JLE sing 205 n y C31 C32 JLE sing 206 n n C6 N3 JLE sing 207 n y C6 S7 JLE sing 208 n y C2 H1 JLE sing 209 n n C25 H2 JLE sing 210 n n C24 H3 JLE sing 211 n n C23 H4 JLE sing 212 n n C21 H5 JLE sing 213 n n C21 H6 JLE sing 214 n n C11 H7 JLE sing 215 n n C12 H8 JLE sing 216 n n C13 H9 JLE sing 217 n n C20 H10 JLE sing 218 n n C17 H11 JLE sing 219 n n C16 H12 JLE sing 220 n n C26 H13 JLE sing 221 n n C27 H14 JLE sing 222 n n O29 H15 JLE sing 223 n n N19 H16 JLE sing 224 n n C31 H17 JLE sing 225 n n C31 H18 JLE sing 226 n n C32 H19 JLE sing 227 n n C32 H20 JLE sing 228 n n C32 H21 JLE sing 229 n n N18 H22 JLE sing 230 n n # _atom_sites.entry_id 6QZ5 _atom_sites.fract_transf_matrix[1][1] 0.025037 _atom_sites.fract_transf_matrix[1][2] 0.014455 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02891 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JLE A 1 401 401 JLE 8C4 . C 3 HOH A 1 501 60 HOH HOH . C 3 HOH A 2 502 89 HOH HOH . C 3 HOH A 3 503 14 HOH HOH . C 3 HOH A 4 504 31 HOH HOH . C 3 HOH A 5 505 40 HOH HOH . C 3 HOH A 6 506 19 HOH HOH . C 3 HOH A 7 507 49 HOH HOH . C 3 HOH A 8 508 28 HOH HOH . C 3 HOH A 9 509 52 HOH HOH . C 3 HOH A 10 510 61 HOH HOH . C 3 HOH A 11 511 44 HOH HOH . C 3 HOH A 12 512 36 HOH HOH . C 3 HOH A 13 513 37 HOH HOH . C 3 HOH A 14 514 81 HOH HOH . C 3 HOH A 15 515 59 HOH HOH . C 3 HOH A 16 516 5 HOH HOH . C 3 HOH A 17 517 18 HOH HOH . C 3 HOH A 18 518 15 HOH HOH . C 3 HOH A 19 519 22 HOH HOH . C 3 HOH A 20 520 38 HOH HOH . C 3 HOH A 21 521 51 HOH HOH . C 3 HOH A 22 522 21 HOH HOH . C 3 HOH A 23 523 20 HOH HOH . C 3 HOH A 24 524 27 HOH HOH . C 3 HOH A 25 525 9 HOH HOH . C 3 HOH A 26 526 46 HOH HOH . C 3 HOH A 27 527 17 HOH HOH . C 3 HOH A 28 528 100 HOH HOH . C 3 HOH A 29 529 4 HOH HOH . C 3 HOH A 30 530 10 HOH HOH . C 3 HOH A 31 531 104 HOH HOH . C 3 HOH A 32 532 82 HOH HOH . C 3 HOH A 33 533 63 HOH HOH . C 3 HOH A 34 534 16 HOH HOH . C 3 HOH A 35 535 1 HOH HOH . C 3 HOH A 36 536 34 HOH HOH . C 3 HOH A 37 537 2 HOH HOH . C 3 HOH A 38 538 3 HOH HOH . C 3 HOH A 39 539 12 HOH HOH . C 3 HOH A 40 540 26 HOH HOH . C 3 HOH A 41 541 24 HOH HOH . C 3 HOH A 42 542 73 HOH HOH . C 3 HOH A 43 543 45 HOH HOH . C 3 HOH A 44 544 6 HOH HOH . C 3 HOH A 45 545 29 HOH HOH . C 3 HOH A 46 546 33 HOH HOH . C 3 HOH A 47 547 75 HOH HOH . C 3 HOH A 48 548 25 HOH HOH . C 3 HOH A 49 549 7 HOH HOH . C 3 HOH A 50 550 8 HOH HOH . C 3 HOH A 51 551 50 HOH HOH . C 3 HOH A 52 552 48 HOH HOH . C 3 HOH A 53 553 108 HOH HOH . C 3 HOH A 54 554 72 HOH HOH . C 3 HOH A 55 555 32 HOH HOH . C 3 HOH A 56 556 42 HOH HOH . C 3 HOH A 57 557 43 HOH HOH . C 3 HOH A 58 558 88 HOH HOH . C 3 HOH A 59 559 35 HOH HOH . C 3 HOH A 60 560 83 HOH HOH . C 3 HOH A 61 561 23 HOH HOH . C 3 HOH A 62 562 56 HOH HOH . C 3 HOH A 63 563 70 HOH HOH . C 3 HOH A 64 564 30 HOH HOH . C 3 HOH A 65 565 67 HOH HOH . C 3 HOH A 66 566 13 HOH HOH . C 3 HOH A 67 567 86 HOH HOH . C 3 HOH A 68 568 101 HOH HOH . C 3 HOH A 69 569 78 HOH HOH . C 3 HOH A 70 570 47 HOH HOH . C 3 HOH A 71 571 94 HOH HOH . C 3 HOH A 72 572 77 HOH HOH . C 3 HOH A 73 573 53 HOH HOH . C 3 HOH A 74 574 102 HOH HOH . C 3 HOH A 75 575 11 HOH HOH . C 3 HOH A 76 576 66 HOH HOH . C 3 HOH A 77 577 55 HOH HOH . C 3 HOH A 78 578 62 HOH HOH . C 3 HOH A 79 579 98 HOH HOH . C 3 HOH A 80 580 97 HOH HOH . C 3 HOH A 81 581 79 HOH HOH . C 3 HOH A 82 582 96 HOH HOH . C 3 HOH A 83 583 74 HOH HOH . C 3 HOH A 84 584 93 HOH HOH . C 3 HOH A 85 585 80 HOH HOH . C 3 HOH A 86 586 109 HOH HOH . C 3 HOH A 87 587 85 HOH HOH . C 3 HOH A 88 588 64 HOH HOH . C 3 HOH A 89 589 68 HOH HOH . C 3 HOH A 90 590 41 HOH HOH . C 3 HOH A 91 591 103 HOH HOH . C 3 HOH A 92 592 107 HOH HOH . C 3 HOH A 93 593 57 HOH HOH . C 3 HOH A 94 594 106 HOH HOH . C 3 HOH A 95 595 90 HOH HOH . C 3 HOH A 96 596 87 HOH HOH . C 3 HOH A 97 597 99 HOH HOH . C 3 HOH A 98 598 92 HOH HOH . C 3 HOH A 99 599 105 HOH HOH . C 3 HOH A 100 600 76 HOH HOH . C 3 HOH A 101 601 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 JLE . . . B 2 4.67 1.637 -6.258 1 28.11 ? C5 JLE 401 A 1 HETATM 2 C C6 JLE . . . B 2 4.361 2.114 -7.523 1 28.52 ? C6 JLE 401 A 1 HETATM 3 C C4 JLE . . . B 2 3.858 0.623 -5.746 1 28.99 ? C4 JLE 401 A 1 HETATM 4 C C2 JLE . . . B 2 2.611 0.631 -7.687 1 28.4 ? C2 JLE 401 A 1 HETATM 5 C C8 JLE . . . B 2 6.237 3.297 -6.597 1 29.17 ? C8 JLE 401 A 1 HETATM 6 N N3 JLE . . . B 2 3.346 1.614 -8.231 1 27.76 ? N3 JLE 401 A 1 HETATM 7 C C25 JLE . . . B 2 2.263 2.89 -0.723 1 26.1 ? C25 JLE 401 A 1 HETATM 8 C C24 JLE . . . B 2 3.622 2.558 -0.843 1 24.24 ? C24 JLE 401 A 1 HETATM 9 C C23 JLE . . . B 2 3.917 1.335 -1.371 1 25.07 ? C23 JLE 401 A 1 HETATM 10 C C22 JLE . . . B 2 2.937 0.424 -1.755 1 26.25 ? C22 JLE 401 A 1 HETATM 11 C C21 JLE . . . B 2 3.357 -0.935 -2.359 1 26.51 ? C21 JLE 401 A 1 HETATM 12 C C9 JLE . . . B 2 5.767 2.342 -5.722 1 29.31 ? C9 JLE 401 A 1 HETATM 13 N N1 JLE . . . B 2 2.874 0.109 -6.494 1 26.36 ? N1 JLE 401 A 1 HETATM 14 C C11 JLE . . . B 2 7.759 1.336 -2.067 1 28.36 ? C11 JLE 401 A 1 HETATM 15 C C12 JLE . . . B 2 7.622 0.415 -3.098 1 29.25 ? C12 JLE 401 A 1 HETATM 16 C C13 JLE . . . B 2 6.976 0.801 -4.274 1 28.82 ? C13 JLE 401 A 1 HETATM 17 C C14 JLE . . . B 2 7.214 2.608 -2.208 1 26.88 ? C14 JLE 401 A 1 HETATM 18 C C10 JLE . . . B 2 6.427 2.079 -4.425 1 28.43 ? C10 JLE 401 A 1 HETATM 19 C C15 JLE . . . B 2 6.588 2.99 -3.39 1 26.5 ? C15 JLE 401 A 1 HETATM 20 C C20 JLE . . . B 2 3.109 -0.867 -3.899 1 26.82 ? C20 JLE 401 A 1 HETATM 21 C C17 JLE . . . B 2 6.597 4.702 -1.976 1 27.59 ? C17 JLE 401 A 1 HETATM 22 C C16 JLE . . . B 2 6.183 4.305 -3.237 1 25.99 ? C16 JLE 401 A 1 HETATM 23 C C26 JLE . . . B 2 1.268 1.973 -1.054 1 26.36 ? C26 JLE 401 A 1 HETATM 24 C C27 JLE . . . B 2 1.61 0.714 -1.564 1 25.6 ? C27 JLE 401 A 1 HETATM 25 C C28 JLE . . . B 2 3.478 -2.251 -4.548 1 27.76 ? C28 JLE 401 A 1 HETATM 26 O O30 JLE . . . B 2 4.546 -2.402 -5.142 1 27.79 ? O30 JLE 401 A 1 HETATM 27 O O29 JLE . . . B 2 2.693 -3.191 -4.48 1 24.97 ? O29 JLE 401 A 1 HETATM 28 N N19 JLE . . . B 2 4.031 0.086 -4.467 1 26.25 ? N19 JLE 401 A 1 HETATM 29 S S7 JLE . . . B 2 5.335 3.407 -8.037 1 29.05 ? S7 JLE 401 A 1 HETATM 30 C C31 JLE . . . B 2 7.4 4.222 -6.368 1 32.17 ? C31 JLE 401 A 1 HETATM 31 C C32 JLE . . . B 2 8.208 4.289 -7.617 1 31.35 ? C32 JLE 401 A 1 HETATM 32 N N18 JLE . . . B 2 7.24 3.671 -1.376 1 26.08 ? N18 JLE 401 A 1 # _model_server_stats.io_time_ms 81 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #