data_6QZB # _model_server_result.job_id uTlv67Vw2w4V11xSmMcnlA _model_server_result.datetime_utc '2024-11-17 03:45:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qzb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6QZB # _exptl.entry_id 6QZB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 417.523 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{R})-2-[[6-ethyl-5-(2-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6QZB _cell.length_a 40.518 _cell.length_b 40.518 _cell.length_c 330.15 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QZB _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H23 N3 O2 S' _chem_comp.formula_weight 417.523 _chem_comp.id JLK _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{R})-2-[[6-ethyl-5-(2-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C29 JLK doub 173 n y C28 C27 JLK sing 174 n y C29 C30 JLK sing 175 n y C27 C26 JLK doub 176 n y C30 C25 JLK doub 177 n y C26 C25 JLK sing 178 n y C25 C12 JLK sing 179 n n C19 C22 JLK doub 180 n y C19 C20 JLK sing 181 n y C12 C11 JLK sing 182 n n C22 C23 JLK sing 183 n y C20 C21 JLK doub 184 n y C23 C24 JLK sing 185 n n C23 C18 JLK doub 186 n y C11 N10 JLK sing 187 n n C11 C13 JLK sing 188 n n C21 C18 JLK sing 189 n y N10 C4 JLK sing 190 n n O14 C13 JLK doub 191 n n C18 C9 JLK sing 192 n n C13 O15 JLK sing 193 n n C4 C5 JLK doub 194 n y C4 N1 JLK sing 195 n y C9 C5 JLK sing 196 n y C9 C8 JLK doub 197 n y C5 C6 JLK sing 198 n y N1 C2 JLK doub 199 n y C16 C8 JLK sing 200 n n C16 C17 JLK sing 201 n n C8 S7 JLK sing 202 n y C2 N3 JLK sing 203 n y C6 N3 JLK doub 204 n y C6 S7 JLK sing 205 n y N10 H1 JLK sing 206 n n C11 H2 JLK sing 207 n n C19 H3 JLK sing 208 n n C20 H4 JLK sing 209 n n C21 H5 JLK sing 210 n n C22 H6 JLK sing 211 n n C24 H7 JLK sing 212 n n C24 H8 JLK sing 213 n n C24 H9 JLK sing 214 n n C27 H10 JLK sing 215 n n C28 H11 JLK sing 216 n n C29 H12 JLK sing 217 n n C30 H13 JLK sing 218 n n C16 H14 JLK sing 219 n n C16 H15 JLK sing 220 n n C17 H16 JLK sing 221 n n C17 H17 JLK sing 222 n n C17 H18 JLK sing 223 n n C2 H19 JLK sing 224 n n O15 H20 JLK sing 225 n n C12 H21 JLK sing 226 n n C12 H22 JLK sing 227 n n C26 H23 JLK sing 228 n n # _atom_sites.entry_id 6QZB _atom_sites.fract_transf_matrix[1][1] 0.02468 _atom_sites.fract_transf_matrix[1][2] 0.014249 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003029 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JLK A 1 401 401 JLK 8C5 . C 3 HOH A 1 501 65 HOH HOH . C 3 HOH A 2 502 87 HOH HOH . C 3 HOH A 3 503 76 HOH HOH . C 3 HOH A 4 504 69 HOH HOH . C 3 HOH A 5 505 48 HOH HOH . C 3 HOH A 6 506 81 HOH HOH . C 3 HOH A 7 507 85 HOH HOH . C 3 HOH A 8 508 61 HOH HOH . C 3 HOH A 9 509 33 HOH HOH . C 3 HOH A 10 510 7 HOH HOH . C 3 HOH A 11 511 1 HOH HOH . C 3 HOH A 12 512 18 HOH HOH . C 3 HOH A 13 513 34 HOH HOH . C 3 HOH A 14 514 8 HOH HOH . C 3 HOH A 15 515 78 HOH HOH . C 3 HOH A 16 516 19 HOH HOH . C 3 HOH A 17 517 16 HOH HOH . C 3 HOH A 18 518 31 HOH HOH . C 3 HOH A 19 519 2 HOH HOH . C 3 HOH A 20 520 30 HOH HOH . C 3 HOH A 21 521 80 HOH HOH . C 3 HOH A 22 522 28 HOH HOH . C 3 HOH A 23 523 23 HOH HOH . C 3 HOH A 24 524 3 HOH HOH . C 3 HOH A 25 525 54 HOH HOH . C 3 HOH A 26 526 6 HOH HOH . C 3 HOH A 27 527 86 HOH HOH . C 3 HOH A 28 528 15 HOH HOH . C 3 HOH A 29 529 55 HOH HOH . C 3 HOH A 30 530 51 HOH HOH . C 3 HOH A 31 531 42 HOH HOH . C 3 HOH A 32 532 41 HOH HOH . C 3 HOH A 33 533 40 HOH HOH . C 3 HOH A 34 534 24 HOH HOH . C 3 HOH A 35 535 12 HOH HOH . C 3 HOH A 36 536 22 HOH HOH . C 3 HOH A 37 537 5 HOH HOH . C 3 HOH A 38 538 50 HOH HOH . C 3 HOH A 39 539 52 HOH HOH . C 3 HOH A 40 540 64 HOH HOH . C 3 HOH A 41 541 4 HOH HOH . C 3 HOH A 42 542 36 HOH HOH . C 3 HOH A 43 543 75 HOH HOH . C 3 HOH A 44 544 82 HOH HOH . C 3 HOH A 45 545 45 HOH HOH . C 3 HOH A 46 546 74 HOH HOH . C 3 HOH A 47 547 13 HOH HOH . C 3 HOH A 48 548 17 HOH HOH . C 3 HOH A 49 549 44 HOH HOH . C 3 HOH A 50 550 59 HOH HOH . C 3 HOH A 51 551 58 HOH HOH . C 3 HOH A 52 552 25 HOH HOH . C 3 HOH A 53 553 49 HOH HOH . C 3 HOH A 54 554 29 HOH HOH . C 3 HOH A 55 555 11 HOH HOH . C 3 HOH A 56 556 46 HOH HOH . C 3 HOH A 57 557 10 HOH HOH . C 3 HOH A 58 558 21 HOH HOH . C 3 HOH A 59 559 26 HOH HOH . C 3 HOH A 60 560 14 HOH HOH . C 3 HOH A 61 561 72 HOH HOH . C 3 HOH A 62 562 73 HOH HOH . C 3 HOH A 63 563 43 HOH HOH . C 3 HOH A 64 564 88 HOH HOH . C 3 HOH A 65 565 89 HOH HOH . C 3 HOH A 66 566 67 HOH HOH . C 3 HOH A 67 567 27 HOH HOH . C 3 HOH A 68 568 83 HOH HOH . C 3 HOH A 69 569 39 HOH HOH . C 3 HOH A 70 570 84 HOH HOH . C 3 HOH A 71 571 9 HOH HOH . C 3 HOH A 72 572 70 HOH HOH . C 3 HOH A 73 573 71 HOH HOH . C 3 HOH A 74 574 37 HOH HOH . C 3 HOH A 75 575 56 HOH HOH . C 3 HOH A 76 576 79 HOH HOH . C 3 HOH A 77 577 38 HOH HOH . C 3 HOH A 78 578 77 HOH HOH . C 3 HOH A 79 579 66 HOH HOH . C 3 HOH A 80 580 68 HOH HOH . C 3 HOH A 81 581 53 HOH HOH . C 3 HOH A 82 582 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N10 JLK . . . B 2 -5.675 0.511 4.511 1 28.26 ? N10 JLK 401 A 1 HETATM 2 C C11 JLK . . . B 2 -4.942 -0.638 3.928 1 29.65 ? C11 JLK 401 A 1 HETATM 3 C C13 JLK . . . B 2 -5.23 -1.993 4.654 1 35.05 ? C13 JLK 401 A 1 HETATM 4 C C18 JLK . . . B 2 -8.02 2.572 4.651 1 30 ? C18 JLK 401 A 1 HETATM 5 C C19 JLK . . . B 2 -9.179 2.485 2.102 1 35.66 ? C19 JLK 401 A 1 HETATM 6 C C20 JLK . . . B 2 -9.326 1.384 2.945 1 32.08 ? C20 JLK 401 A 1 HETATM 7 C C21 JLK . . . B 2 -8.759 1.457 4.209 1 30.38 ? C21 JLK 401 A 1 HETATM 8 C C22 JLK . . . B 2 -8.446 3.614 2.508 1 34.7 ? C22 JLK 401 A 1 HETATM 9 C C23 JLK . . . B 2 -7.855 3.653 3.777 1 34.16 ? C23 JLK 401 A 1 HETATM 10 C C24 JLK . . . B 2 -7.077 4.846 4.201 1 31.57 ? C24 JLK 401 A 1 HETATM 11 C C25 JLK . . . B 2 -4.779 0.505 1.785 1 29.41 ? C25 JLK 401 A 1 HETATM 12 C C27 JLK . . . B 2 -2.908 1.796 0.976 1 34.03 ? C27 JLK 401 A 1 HETATM 13 C C28 JLK . . . B 2 -3.749 2.837 0.574 1 31.18 ? C28 JLK 401 A 1 HETATM 14 C C29 JLK . . . B 2 -5.112 2.697 0.779 1 31.9 ? C29 JLK 401 A 1 HETATM 15 C C30 JLK . . . B 2 -5.627 1.535 1.397 1 34.35 ? C30 JLK 401 A 1 HETATM 16 C C9 JLK . . . B 2 -7.43 2.579 6.007 1 32.53 ? C9 JLK 401 A 1 HETATM 17 C C5 JLK . . . B 2 -6.36 1.742 6.44 1 32.71 ? C5 JLK 401 A 1 HETATM 18 C C8 JLK . . . B 2 -7.901 3.349 7.047 1 30.9 ? C8 JLK 401 A 1 HETATM 19 C C16 JLK . . . B 2 -9.056 4.324 6.944 1 34.72 ? C16 JLK 401 A 1 HETATM 20 C C17 JLK . . . B 2 -9.929 4.4 8.154 1 37.21 ? C17 JLK 401 A 1 HETATM 21 S S7 JLK . . . B 2 -7.054 3.131 8.508 1 33.48 ? S7 JLK 401 A 1 HETATM 22 C C6 JLK . . . B 2 -6.074 1.964 7.782 1 31.63 ? C6 JLK 401 A 1 HETATM 23 N N3 JLK . . . B 2 -5.04 1.347 8.419 1 32.68 ? N3 JLK 401 A 1 HETATM 24 C C2 JLK . . . B 2 -4.286 0.476 7.751 1 30.51 ? C2 JLK 401 A 1 HETATM 25 N N1 JLK . . . B 2 -4.516 0.174 6.477 1 33.85 ? N1 JLK 401 A 1 HETATM 26 C C4 JLK . . . B 2 -5.507 0.817 5.793 1 31.06 ? C4 JLK 401 A 1 HETATM 27 O O15 JLK . . . B 2 -6.332 -2.125 5.208 1 31.68 ? O15 JLK 401 A 1 HETATM 28 O O14 JLK . . . B 2 -4.406 -2.933 4.527 1 26.83 ? O14 JLK 401 A 1 HETATM 29 C C12 JLK . . . B 2 -5.294 -0.767 2.463 1 30.51 ? C12 JLK 401 A 1 HETATM 30 C C26 JLK . . . B 2 -3.423 0.65 1.573 1 29.73 ? C26 JLK 401 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #