data_6QZC
#
_model_server_result.job_id            Fu124vhgN6QcOTlKz3Tdtg 
_model_server_result.datetime_utc      '2024-11-04 22:51:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qzc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":201}' 
#
_entry.id    6QZC 
#
_exptl.entry_id    6QZC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6QZC 
_cell.length_a            90.06 
_cell.length_b            116.08 
_cell.length_c            43.68 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QZC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 H N N 
? 5 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 105 AAA CYS 107 1_555 A SG CYS 161 AAA CYS 163 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.005 ? 
disulf ? disulf2 A SG CYS 105 AAA CYS 107 1_555 A SG CYS 161 AAA CYS 163 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.139 ? 
disulf ? disulf3 B SG CYS 16 BBB CYS 15 1_555 B SG CYS 80 BBB CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
disulf ? disulf4 B SG CYS 118 BBB CYS 117 1_555 B SG CYS 174 BBB CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
covale ? covale1 B C ARG 30 BBB ARG 29 1_555 B N CSO 31 BBB CSO 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale2 B C CSO 31 BBB CSO 30 1_555 B N ILE 32 BBB ILE 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 97 n n 
C1 C2 EDO sing 98 n n 
C1 H11 EDO sing 99 n n 
C1 H12 EDO sing 100 n n 
O1 HO1 EDO sing 101 n n 
C2 O2 EDO sing 102 n n 
C2 H21 EDO sing 103 n n 
C2 H22 EDO sing 104 n n 
O2 HO2 EDO sing 105 n n 
#
_atom_sites.entry_id                     6QZC 
_atom_sites.fract_transf_matrix[1][1]    0.011104 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008615 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022894 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 PEG AAA 1 201 1 PEG PEG . 
E 5 EDO AAA 1 202 1 EDO EDO . 
F 5 EDO AAA 1 203 4 EDO EDO . 
G 6 GOL AAA 1 204 1 GOL GOL . 
H 5 EDO BBB 1 201 2 EDO EDO . 
I 5 EDO BBB 1 202 3 EDO EDO . 
J 7 SO4 BBB 1 203 1 SO4 SO4 . 
K 8 HOH AAA 1 301 127 HOH HOH . 
K 8 HOH AAA 2 302 123 HOH HOH . 
K 8 HOH AAA 3 303 158 HOH HOH . 
K 8 HOH AAA 4 304 41 HOH HOH . 
K 8 HOH AAA 5 305 31 HOH HOH . 
K 8 HOH AAA 6 306 47 HOH HOH . 
K 8 HOH AAA 7 307 26 HOH HOH . 
K 8 HOH AAA 8 308 199 HOH HOH . 
K 8 HOH AAA 9 309 57 HOH HOH . 
K 8 HOH AAA 10 310 21 HOH HOH . 
K 8 HOH AAA 11 311 1 HOH HOH . 
K 8 HOH AAA 12 312 92 HOH HOH . 
K 8 HOH AAA 13 313 39 HOH HOH . 
K 8 HOH AAA 14 314 66 HOH HOH . 
K 8 HOH AAA 15 315 3 HOH HOH . 
K 8 HOH AAA 16 316 60 HOH HOH . 
K 8 HOH AAA 17 317 146 HOH HOH . 
K 8 HOH AAA 18 318 168 HOH HOH . 
K 8 HOH AAA 19 319 9 HOH HOH . 
K 8 HOH AAA 20 320 2 HOH HOH . 
K 8 HOH AAA 21 321 167 HOH HOH . 
K 8 HOH AAA 22 322 185 HOH HOH . 
K 8 HOH AAA 23 323 46 HOH HOH . 
K 8 HOH AAA 24 324 112 HOH HOH . 
K 8 HOH AAA 25 325 99 HOH HOH . 
K 8 HOH AAA 26 326 82 HOH HOH . 
K 8 HOH AAA 27 327 75 HOH HOH . 
K 8 HOH AAA 28 328 63 HOH HOH . 
K 8 HOH AAA 29 329 44 HOH HOH . 
K 8 HOH AAA 30 330 129 HOH HOH . 
K 8 HOH AAA 31 331 70 HOH HOH . 
K 8 HOH AAA 32 332 28 HOH HOH . 
K 8 HOH AAA 33 333 142 HOH HOH . 
K 8 HOH AAA 34 334 86 HOH HOH . 
K 8 HOH AAA 35 335 13 HOH HOH . 
K 8 HOH AAA 36 336 169 HOH HOH . 
K 8 HOH AAA 37 337 35 HOH HOH . 
K 8 HOH AAA 38 338 8 HOH HOH . 
K 8 HOH AAA 39 339 152 HOH HOH . 
K 8 HOH AAA 40 340 77 HOH HOH . 
K 8 HOH AAA 41 341 6 HOH HOH . 
K 8 HOH AAA 42 342 4 HOH HOH . 
K 8 HOH AAA 43 343 7 HOH HOH . 
K 8 HOH AAA 44 344 95 HOH HOH . 
K 8 HOH AAA 45 345 19 HOH HOH . 
K 8 HOH AAA 46 346 202 HOH HOH . 
K 8 HOH AAA 47 347 172 HOH HOH . 
K 8 HOH AAA 48 348 32 HOH HOH . 
K 8 HOH AAA 49 349 107 HOH HOH . 
K 8 HOH AAA 50 350 197 HOH HOH . 
K 8 HOH AAA 51 351 178 HOH HOH . 
K 8 HOH AAA 52 352 11 HOH HOH . 
K 8 HOH AAA 53 353 125 HOH HOH . 
K 8 HOH AAA 54 354 157 HOH HOH . 
K 8 HOH AAA 55 355 34 HOH HOH . 
K 8 HOH AAA 56 356 108 HOH HOH . 
K 8 HOH AAA 57 357 137 HOH HOH . 
K 8 HOH AAA 58 358 180 HOH HOH . 
K 8 HOH AAA 59 359 84 HOH HOH . 
K 8 HOH AAA 60 360 147 HOH HOH . 
K 8 HOH AAA 61 361 141 HOH HOH . 
K 8 HOH AAA 62 362 22 HOH HOH . 
K 8 HOH AAA 63 363 80 HOH HOH . 
K 8 HOH AAA 64 364 54 HOH HOH . 
K 8 HOH AAA 65 365 218 HOH HOH . 
K 8 HOH AAA 66 366 117 HOH HOH . 
K 8 HOH AAA 67 367 69 HOH HOH . 
K 8 HOH AAA 68 368 65 HOH HOH . 
K 8 HOH AAA 69 369 38 HOH HOH . 
K 8 HOH AAA 70 370 33 HOH HOH . 
K 8 HOH AAA 71 371 20 HOH HOH . 
K 8 HOH AAA 72 372 49 HOH HOH . 
K 8 HOH AAA 73 373 72 HOH HOH . 
K 8 HOH AAA 74 374 131 HOH HOH . 
K 8 HOH AAA 75 375 164 HOH HOH . 
K 8 HOH AAA 76 376 109 HOH HOH . 
K 8 HOH AAA 77 377 135 HOH HOH . 
K 8 HOH AAA 78 378 211 HOH HOH . 
K 8 HOH AAA 79 379 114 HOH HOH . 
K 8 HOH AAA 80 380 133 HOH HOH . 
K 8 HOH AAA 81 381 104 HOH HOH . 
K 8 HOH AAA 82 382 79 HOH HOH . 
K 8 HOH AAA 83 383 24 HOH HOH . 
K 8 HOH AAA 84 384 149 HOH HOH . 
K 8 HOH AAA 85 385 154 HOH HOH . 
K 8 HOH AAA 86 386 150 HOH HOH . 
K 8 HOH AAA 87 387 148 HOH HOH . 
K 8 HOH AAA 88 388 42 HOH HOH . 
K 8 HOH AAA 89 389 208 HOH HOH . 
K 8 HOH AAA 90 390 203 HOH HOH . 
K 8 HOH AAA 91 391 45 HOH HOH . 
K 8 HOH AAA 92 392 160 HOH HOH . 
K 8 HOH AAA 93 393 14 HOH HOH . 
K 8 HOH AAA 94 394 50 HOH HOH . 
K 8 HOH AAA 95 395 30 HOH HOH . 
K 8 HOH AAA 96 396 103 HOH HOH . 
K 8 HOH AAA 97 397 126 HOH HOH . 
K 8 HOH AAA 98 398 18 HOH HOH . 
K 8 HOH AAA 99 399 163 HOH HOH . 
K 8 HOH AAA 100 400 186 HOH HOH . 
K 8 HOH AAA 101 401 12 HOH HOH . 
K 8 HOH AAA 102 402 128 HOH HOH . 
K 8 HOH AAA 103 403 100 HOH HOH . 
K 8 HOH AAA 104 404 58 HOH HOH . 
K 8 HOH AAA 105 405 67 HOH HOH . 
K 8 HOH AAA 106 406 93 HOH HOH . 
K 8 HOH AAA 107 407 214 HOH HOH . 
K 8 HOH AAA 108 408 132 HOH HOH . 
K 8 HOH AAA 109 409 193 HOH HOH . 
K 8 HOH AAA 110 410 138 HOH HOH . 
K 8 HOH AAA 111 411 74 HOH HOH . 
K 8 HOH AAA 112 412 192 HOH HOH . 
K 8 HOH AAA 113 413 118 HOH HOH . 
K 8 HOH AAA 114 414 25 HOH HOH . 
K 8 HOH AAA 115 415 116 HOH HOH . 
K 8 HOH AAA 116 416 71 HOH HOH . 
K 8 HOH AAA 117 417 195 HOH HOH . 
K 8 HOH AAA 118 418 140 HOH HOH . 
K 8 HOH AAA 119 419 219 HOH HOH . 
K 8 HOH AAA 120 420 52 HOH HOH . 
L 8 HOH BBB 1 301 190 HOH HOH . 
L 8 HOH BBB 2 302 145 HOH HOH . 
L 8 HOH BBB 3 303 120 HOH HOH . 
L 8 HOH BBB 4 304 187 HOH HOH . 
L 8 HOH BBB 5 305 53 HOH HOH . 
L 8 HOH BBB 6 306 182 HOH HOH . 
L 8 HOH BBB 7 307 205 HOH HOH . 
L 8 HOH BBB 8 308 221 HOH HOH . 
L 8 HOH BBB 9 309 204 HOH HOH . 
L 8 HOH BBB 10 310 206 HOH HOH . 
L 8 HOH BBB 11 311 207 HOH HOH . 
L 8 HOH BBB 12 312 175 HOH HOH . 
L 8 HOH BBB 13 313 173 HOH HOH . 
L 8 HOH BBB 14 314 111 HOH HOH . 
L 8 HOH BBB 15 315 64 HOH HOH . 
L 8 HOH BBB 16 316 85 HOH HOH . 
L 8 HOH BBB 17 317 91 HOH HOH . 
L 8 HOH BBB 18 318 151 HOH HOH . 
L 8 HOH BBB 19 319 139 HOH HOH . 
L 8 HOH BBB 20 320 121 HOH HOH . 
L 8 HOH BBB 21 321 17 HOH HOH . 
L 8 HOH BBB 22 322 88 HOH HOH . 
L 8 HOH BBB 23 323 61 HOH HOH . 
L 8 HOH BBB 24 324 171 HOH HOH . 
L 8 HOH BBB 25 325 83 HOH HOH . 
L 8 HOH BBB 26 326 200 HOH HOH . 
L 8 HOH BBB 27 327 215 HOH HOH . 
L 8 HOH BBB 28 328 94 HOH HOH . 
L 8 HOH BBB 29 329 130 HOH HOH . 
L 8 HOH BBB 30 330 210 HOH HOH . 
L 8 HOH BBB 31 331 134 HOH HOH . 
L 8 HOH BBB 32 332 29 HOH HOH . 
L 8 HOH BBB 33 333 161 HOH HOH . 
L 8 HOH BBB 34 334 55 HOH HOH . 
L 8 HOH BBB 35 335 166 HOH HOH . 
L 8 HOH BBB 36 336 122 HOH HOH . 
L 8 HOH BBB 37 337 191 HOH HOH . 
L 8 HOH BBB 38 338 189 HOH HOH . 
L 8 HOH BBB 39 339 115 HOH HOH . 
L 8 HOH BBB 40 340 209 HOH HOH . 
L 8 HOH BBB 41 341 174 HOH HOH . 
L 8 HOH BBB 42 342 201 HOH HOH . 
L 8 HOH BBB 43 343 196 HOH HOH . 
L 8 HOH BBB 44 344 68 HOH HOH . 
L 8 HOH BBB 45 345 48 HOH HOH . 
L 8 HOH BBB 46 346 62 HOH HOH . 
L 8 HOH BBB 47 347 27 HOH HOH . 
L 8 HOH BBB 48 348 124 HOH HOH . 
L 8 HOH BBB 49 349 76 HOH HOH . 
L 8 HOH BBB 50 350 212 HOH HOH . 
L 8 HOH BBB 51 351 23 HOH HOH . 
L 8 HOH BBB 52 352 220 HOH HOH . 
L 8 HOH BBB 53 353 183 HOH HOH . 
L 8 HOH BBB 54 354 5 HOH HOH . 
L 8 HOH BBB 55 355 170 HOH HOH . 
L 8 HOH BBB 56 356 153 HOH HOH . 
L 8 HOH BBB 57 357 59 HOH HOH . 
L 8 HOH BBB 58 358 10 HOH HOH . 
L 8 HOH BBB 59 359 162 HOH HOH . 
L 8 HOH BBB 60 360 188 HOH HOH . 
L 8 HOH BBB 61 361 36 HOH HOH . 
L 8 HOH BBB 62 362 143 HOH HOH . 
L 8 HOH BBB 63 363 179 HOH HOH . 
L 8 HOH BBB 64 364 43 HOH HOH . 
L 8 HOH BBB 65 365 110 HOH HOH . 
L 8 HOH BBB 66 366 102 HOH HOH . 
L 8 HOH BBB 67 367 37 HOH HOH . 
L 8 HOH BBB 68 368 89 HOH HOH . 
L 8 HOH BBB 69 369 98 HOH HOH . 
L 8 HOH BBB 70 370 51 HOH HOH . 
L 8 HOH BBB 71 371 144 HOH HOH . 
L 8 HOH BBB 72 372 40 HOH HOH . 
L 8 HOH BBB 73 373 217 HOH HOH . 
L 8 HOH BBB 74 374 15 HOH HOH . 
L 8 HOH BBB 75 375 87 HOH HOH . 
L 8 HOH BBB 76 376 159 HOH HOH . 
L 8 HOH BBB 77 377 113 HOH HOH . 
L 8 HOH BBB 78 378 73 HOH HOH . 
L 8 HOH BBB 79 379 81 HOH HOH . 
L 8 HOH BBB 80 380 184 HOH HOH . 
L 8 HOH BBB 81 381 106 HOH HOH . 
L 8 HOH BBB 82 382 181 HOH HOH . 
L 8 HOH BBB 83 383 97 HOH HOH . 
L 8 HOH BBB 84 384 155 HOH HOH . 
L 8 HOH BBB 85 385 216 HOH HOH . 
L 8 HOH BBB 86 386 194 HOH HOH . 
L 8 HOH BBB 87 387 136 HOH HOH . 
L 8 HOH BBB 88 388 105 HOH HOH . 
L 8 HOH BBB 89 389 198 HOH HOH . 
M 8 HOH CCC 1 101 177 HOH HOH . 
M 8 HOH CCC 2 102 101 HOH HOH . 
M 8 HOH CCC 3 103 16 HOH HOH . 
M 8 HOH CCC 4 104 119 HOH HOH . 
M 8 HOH CCC 5 105 165 HOH HOH . 
M 8 HOH CCC 6 106 96 HOH HOH . 
M 8 HOH CCC 7 107 90 HOH HOH . 
M 8 HOH CCC 8 108 56 HOH HOH . 
M 8 HOH CCC 9 109 78 HOH HOH . 
M 8 HOH CCC 10 110 156 HOH HOH . 
M 8 HOH CCC 11 111 176 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . H 5 54.21 33.512 -3.322 1 42.86 ? C1 EDO 201 BBB 1 
HETATM 2 O O1 EDO . . . H 5 54.177 33.204 -1.937 1 41.91 ? O1 EDO 201 BBB 1 
HETATM 3 C C2 EDO . . . H 5 54.269 32.392 -4.297 1 43.98 ? C2 EDO 201 BBB 1 
HETATM 4 O O2 EDO . . . H 5 54.723 32.776 -5.585 1 49.12 ? O2 EDO 201 BBB 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#