data_6QZH # _model_server_result.job_id 4JUdvbgpkzREMgUPCARU2A _model_server_result.datetime_utc '2025-03-26 06:54:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qzh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1503}' # _entry.id 6QZH # _exptl.entry_id 6QZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QZH _cell.length_a 79.124 _cell.length_b 128.809 _cell.length_c 100.576 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QZH _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 88 A CYS 129 1_555 A SG CYS 169 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc1 A OD1 ASN 35 A ASN 76 1_555 D NA NA . A NA 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc2 A OD2 ASP 63 A ASP 104 1_555 D NA NA . A NA 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? metalc ? metalc3 A OD1 ASN 750 A ASN 322 1_555 D NA NA . A NA 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.092 ? metalc ? metalc4 D NA NA . A NA 1503 1_555 G O HOH . A HOH 1686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6QZH _atom_sites.fract_transf_matrix[1][1] 0.012638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007763 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PGE A 1 1501 262 PGE PGE . C 3 JLW A 1 1502 1 JLW LIG . D 4 NA A 1 1503 1 NA NA . E 5 TAR A 1 1504 1 TAR TAR . F 5 TAR A 1 1505 2 TAR TAR . G 6 HOH A 1 1601 182 HOH HOH . G 6 HOH A 2 1602 134 HOH WAT . G 6 HOH A 3 1603 15 HOH WAT . G 6 HOH A 4 1604 83 HOH WAT . G 6 HOH A 5 1605 88 HOH WAT . G 6 HOH A 6 1606 123 HOH WAT . G 6 HOH A 7 1607 95 HOH WAT . G 6 HOH A 8 1608 173 HOH HOH . G 6 HOH A 9 1609 68 HOH WAT . G 6 HOH A 10 1610 160 HOH WAT . G 6 HOH A 11 1611 166 HOH HOH . G 6 HOH A 12 1612 178 HOH HOH . G 6 HOH A 13 1613 64 HOH WAT . G 6 HOH A 14 1614 170 HOH HOH . G 6 HOH A 15 1615 177 HOH HOH . G 6 HOH A 16 1616 13 HOH WAT . G 6 HOH A 17 1617 77 HOH WAT . G 6 HOH A 18 1618 161 HOH WAT . G 6 HOH A 19 1619 69 HOH WAT . G 6 HOH A 20 1620 94 HOH WAT . G 6 HOH A 21 1621 14 HOH WAT . G 6 HOH A 22 1622 174 HOH HOH . G 6 HOH A 23 1623 58 HOH WAT . G 6 HOH A 24 1624 2 HOH WAT . G 6 HOH A 25 1625 66 HOH WAT . G 6 HOH A 26 1626 110 HOH WAT . G 6 HOH A 27 1627 36 HOH WAT . G 6 HOH A 28 1628 125 HOH WAT . G 6 HOH A 29 1629 18 HOH WAT . G 6 HOH A 30 1630 181 HOH HOH . G 6 HOH A 31 1631 7 HOH WAT . G 6 HOH A 32 1632 39 HOH WAT . G 6 HOH A 33 1633 96 HOH WAT . G 6 HOH A 34 1634 62 HOH WAT . G 6 HOH A 35 1635 19 HOH WAT . G 6 HOH A 36 1636 29 HOH WAT . G 6 HOH A 37 1637 114 HOH WAT . G 6 HOH A 38 1638 169 HOH HOH . G 6 HOH A 39 1639 22 HOH WAT . G 6 HOH A 40 1640 1 HOH WAT . G 6 HOH A 41 1641 20 HOH WAT . G 6 HOH A 42 1642 30 HOH WAT . G 6 HOH A 43 1643 105 HOH WAT . G 6 HOH A 44 1644 118 HOH WAT . G 6 HOH A 45 1645 179 HOH HOH . G 6 HOH A 46 1646 3 HOH WAT . G 6 HOH A 47 1647 17 HOH WAT . G 6 HOH A 48 1648 115 HOH WAT . G 6 HOH A 49 1649 98 HOH WAT . G 6 HOH A 50 1650 128 HOH WAT . G 6 HOH A 51 1651 42 HOH WAT . G 6 HOH A 52 1652 6 HOH WAT . G 6 HOH A 53 1653 16 HOH WAT . G 6 HOH A 54 1654 32 HOH WAT . G 6 HOH A 55 1655 27 HOH WAT . G 6 HOH A 56 1656 46 HOH WAT . G 6 HOH A 57 1657 47 HOH WAT . G 6 HOH A 58 1658 89 HOH WAT . G 6 HOH A 59 1659 184 HOH HOH . G 6 HOH A 60 1660 12 HOH WAT . G 6 HOH A 61 1661 147 HOH WAT . G 6 HOH A 62 1662 70 HOH WAT . G 6 HOH A 63 1663 40 HOH WAT . G 6 HOH A 64 1664 130 HOH WAT . G 6 HOH A 65 1665 55 HOH WAT . G 6 HOH A 66 1666 9 HOH WAT . G 6 HOH A 67 1667 24 HOH WAT . G 6 HOH A 68 1668 51 HOH WAT . G 6 HOH A 69 1669 25 HOH WAT . G 6 HOH A 70 1670 41 HOH WAT . G 6 HOH A 71 1671 117 HOH WAT . G 6 HOH A 72 1672 44 HOH WAT . G 6 HOH A 73 1673 127 HOH WAT . G 6 HOH A 74 1674 67 HOH WAT . G 6 HOH A 75 1675 71 HOH WAT . G 6 HOH A 76 1676 186 HOH HOH . G 6 HOH A 77 1677 112 HOH WAT . G 6 HOH A 78 1678 122 HOH WAT . G 6 HOH A 79 1679 48 HOH WAT . G 6 HOH A 80 1680 50 HOH WAT . G 6 HOH A 81 1681 21 HOH WAT . G 6 HOH A 82 1682 54 HOH WAT . G 6 HOH A 83 1683 49 HOH WAT . G 6 HOH A 84 1684 31 HOH WAT . G 6 HOH A 85 1685 111 HOH WAT . G 6 HOH A 86 1686 163 HOH HOH . G 6 HOH A 87 1687 99 HOH WAT . G 6 HOH A 88 1688 5 HOH WAT . G 6 HOH A 89 1689 180 HOH HOH . G 6 HOH A 90 1690 155 HOH WAT . G 6 HOH A 91 1691 45 HOH WAT . G 6 HOH A 92 1692 132 HOH WAT . G 6 HOH A 93 1693 38 HOH WAT . G 6 HOH A 94 1694 8 HOH WAT . G 6 HOH A 95 1695 74 HOH WAT . G 6 HOH A 96 1696 75 HOH WAT . G 6 HOH A 97 1697 26 HOH WAT . G 6 HOH A 98 1698 43 HOH WAT . G 6 HOH A 99 1699 33 HOH WAT . G 6 HOH A 100 1700 133 HOH WAT . G 6 HOH A 101 1701 162 HOH WAT . G 6 HOH A 102 1702 10 HOH WAT . G 6 HOH A 103 1703 146 HOH WAT . G 6 HOH A 104 1704 102 HOH WAT . G 6 HOH A 105 1705 139 HOH WAT . G 6 HOH A 106 1706 168 HOH HOH . G 6 HOH A 107 1707 135 HOH WAT . G 6 HOH A 108 1708 34 HOH WAT . G 6 HOH A 109 1709 176 HOH HOH . G 6 HOH A 110 1710 151 HOH WAT . G 6 HOH A 111 1711 84 HOH WAT . G 6 HOH A 112 1712 79 HOH WAT . G 6 HOH A 113 1713 136 HOH WAT . G 6 HOH A 114 1714 165 HOH HOH . G 6 HOH A 115 1715 164 HOH HOH . G 6 HOH A 116 1716 124 HOH WAT . G 6 HOH A 117 1717 159 HOH WAT . G 6 HOH A 118 1718 53 HOH WAT . G 6 HOH A 119 1719 35 HOH WAT . G 6 HOH A 120 1720 86 HOH WAT . G 6 HOH A 121 1721 52 HOH WAT . G 6 HOH A 122 1722 73 HOH WAT . G 6 HOH A 123 1723 82 HOH WAT . G 6 HOH A 124 1724 11 HOH WAT . G 6 HOH A 125 1725 4 HOH WAT . G 6 HOH A 126 1726 28 HOH WAT . G 6 HOH A 127 1727 172 HOH HOH . G 6 HOH A 128 1728 175 HOH HOH . G 6 HOH A 129 1729 97 HOH WAT . G 6 HOH A 130 1730 171 HOH HOH . G 6 HOH A 131 1731 126 HOH WAT . G 6 HOH A 132 1732 107 HOH WAT . G 6 HOH A 133 1733 90 HOH WAT . G 6 HOH A 134 1734 145 HOH WAT . G 6 HOH A 135 1735 65 HOH WAT . G 6 HOH A 136 1736 156 HOH WAT . G 6 HOH A 137 1737 185 HOH HOH . G 6 HOH A 138 1738 60 HOH WAT . G 6 HOH A 139 1739 183 HOH HOH . G 6 HOH A 140 1740 80 HOH WAT . G 6 HOH A 141 1741 152 HOH WAT . G 6 HOH A 142 1742 91 HOH WAT . G 6 HOH A 143 1743 154 HOH WAT . G 6 HOH A 144 1744 106 HOH WAT . G 6 HOH A 145 1745 72 HOH WAT . G 6 HOH A 146 1746 144 HOH WAT . G 6 HOH A 147 1747 37 HOH WAT . G 6 HOH A 148 1748 158 HOH WAT . G 6 HOH A 149 1749 142 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -19.403 _atom_site.Cartn_y -20.996 _atom_site.Cartn_z -6.2 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 80.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 1503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #