data_6R07 # _model_server_result.job_id lMUmwOUbGw4Y49QhIzXiyA _model_server_result.datetime_utc '2024-11-25 09:58:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r07 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6R07 # _exptl.entry_id 6R07 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6R07 _cell.length_a 57.839 _cell.length_b 57.839 _cell.length_c 394.505 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R07 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_444 -y-1,-x-1,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 -28.9195 -50.090043 -65.750833 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 100 A ASP 98 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc2 A OD2 ASP 100 A ASP 98 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc3 A OD2 ASP 104 A ASP 102 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc4 A OD2 ASP 252 A ASP 250 1_555 E ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc5 D ZN ZN . A ZN 403 1_555 H O HOH . A HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? metalc ? metalc6 D ZN ZN . A ZN 403 1_555 H O HOH . A HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc7 D ZN ZN . A ZN 403 1_555 H O HOH . A HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc8 E ZN ZN . A ZN 404 1_555 H O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc9 E ZN ZN . A ZN 404 1_555 H O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.883 ? metalc ? metalc10 E ZN ZN . A ZN 404 1_555 H O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc11 E ZN ZN . A ZN 404 1_555 H O HOH . A HOH 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.875 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6R07 _atom_sites.fract_transf_matrix[1][1] 0.017289 _atom_sites.fract_transf_matrix[1][2] 0.009982 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019964 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3N2 A 1 401 401 3N2 LI1 . C 2 3N2 A 1 402 501 3N2 LI1 . D 3 ZN A 1 403 1 ZN ZN . E 3 ZN A 1 404 2 ZN ZN . F 4 SO4 A 1 405 1 SO4 SO4 . G 5 DMS A 1 406 2 DMS DMS . H 6 HOH A 1 501 242 HOH HOH . H 6 HOH A 2 502 236 HOH HOH . H 6 HOH A 3 503 260 HOH HOH . H 6 HOH A 4 504 54 HOH HOH . H 6 HOH A 5 505 238 HOH HOH . H 6 HOH A 6 506 243 HOH HOH . H 6 HOH A 7 507 246 HOH HOH . H 6 HOH A 8 508 5 HOH HOH . H 6 HOH A 9 509 190 HOH HOH . H 6 HOH A 10 510 46 HOH HOH . H 6 HOH A 11 511 34 HOH HOH . H 6 HOH A 12 512 66 HOH HOH . H 6 HOH A 13 513 157 HOH HOH . H 6 HOH A 14 514 261 HOH HOH . H 6 HOH A 15 515 12 HOH HOH . H 6 HOH A 16 516 192 HOH HOH . H 6 HOH A 17 517 100 HOH HOH . H 6 HOH A 18 518 94 HOH HOH . H 6 HOH A 19 519 253 HOH HOH . H 6 HOH A 20 520 247 HOH HOH . H 6 HOH A 21 521 81 HOH HOH . H 6 HOH A 22 522 254 HOH HOH . H 6 HOH A 23 523 235 HOH HOH . H 6 HOH A 24 524 33 HOH HOH . H 6 HOH A 25 525 135 HOH HOH . H 6 HOH A 26 526 60 HOH HOH . H 6 HOH A 27 527 62 HOH HOH . H 6 HOH A 28 528 43 HOH HOH . H 6 HOH A 29 529 67 HOH HOH . H 6 HOH A 30 530 103 HOH HOH . H 6 HOH A 31 531 1 HOH HOH . H 6 HOH A 32 532 51 HOH HOH . H 6 HOH A 33 533 35 HOH HOH . H 6 HOH A 34 534 86 HOH HOH . H 6 HOH A 35 535 107 HOH HOH . H 6 HOH A 36 536 55 HOH HOH . H 6 HOH A 37 537 233 HOH HOH . H 6 HOH A 38 538 219 HOH HOH . H 6 HOH A 39 539 89 HOH HOH . H 6 HOH A 40 540 7 HOH HOH . H 6 HOH A 41 541 195 HOH HOH . H 6 HOH A 42 542 99 HOH HOH . H 6 HOH A 43 543 252 HOH HOH . H 6 HOH A 44 544 27 HOH HOH . H 6 HOH A 45 545 166 HOH HOH . H 6 HOH A 46 546 101 HOH HOH . H 6 HOH A 47 547 40 HOH HOH . H 6 HOH A 48 548 113 HOH HOH . H 6 HOH A 49 549 24 HOH HOH . H 6 HOH A 50 550 125 HOH HOH . H 6 HOH A 51 551 4 HOH HOH . H 6 HOH A 52 552 106 HOH HOH . H 6 HOH A 53 553 144 HOH HOH . H 6 HOH A 54 554 216 HOH HOH . H 6 HOH A 55 555 153 HOH HOH . H 6 HOH A 56 556 147 HOH HOH . H 6 HOH A 57 557 127 HOH HOH . H 6 HOH A 58 558 268 HOH HOH . H 6 HOH A 59 559 197 HOH HOH . H 6 HOH A 60 560 114 HOH HOH . H 6 HOH A 61 561 168 HOH HOH . H 6 HOH A 62 562 217 HOH HOH . H 6 HOH A 63 563 38 HOH HOH . H 6 HOH A 64 564 76 HOH HOH . H 6 HOH A 65 565 23 HOH HOH . H 6 HOH A 66 566 185 HOH HOH . H 6 HOH A 67 567 266 HOH HOH . H 6 HOH A 68 568 108 HOH HOH . H 6 HOH A 69 569 96 HOH HOH . H 6 HOH A 70 570 30 HOH HOH . H 6 HOH A 71 571 71 HOH HOH . H 6 HOH A 72 572 105 HOH HOH . H 6 HOH A 73 573 61 HOH HOH . H 6 HOH A 74 574 9 HOH HOH . H 6 HOH A 75 575 95 HOH HOH . H 6 HOH A 76 576 87 HOH HOH . H 6 HOH A 77 577 109 HOH HOH . H 6 HOH A 78 578 31 HOH HOH . H 6 HOH A 79 579 41 HOH HOH . H 6 HOH A 80 580 181 HOH HOH . H 6 HOH A 81 581 145 HOH HOH . H 6 HOH A 82 582 77 HOH HOH . H 6 HOH A 83 583 123 HOH HOH . H 6 HOH A 84 584 165 HOH HOH . H 6 HOH A 85 585 68 HOH HOH . H 6 HOH A 86 586 146 HOH HOH . H 6 HOH A 87 587 78 HOH HOH . H 6 HOH A 88 588 134 HOH HOH . H 6 HOH A 89 589 8 HOH HOH . H 6 HOH A 90 590 256 HOH HOH . H 6 HOH A 91 591 11 HOH HOH . H 6 HOH A 92 592 148 HOH HOH . H 6 HOH A 93 593 29 HOH HOH . H 6 HOH A 94 594 72 HOH HOH . H 6 HOH A 95 595 245 HOH HOH . H 6 HOH A 96 596 28 HOH HOH . H 6 HOH A 97 597 112 HOH HOH . H 6 HOH A 98 598 26 HOH HOH . H 6 HOH A 99 599 74 HOH HOH . H 6 HOH A 100 600 136 HOH HOH . H 6 HOH A 101 601 17 HOH HOH . H 6 HOH A 102 602 70 HOH HOH . H 6 HOH A 103 603 64 HOH HOH . H 6 HOH A 104 604 13 HOH HOH . H 6 HOH A 105 605 79 HOH HOH . H 6 HOH A 106 606 6 HOH HOH . H 6 HOH A 107 607 21 HOH HOH . H 6 HOH A 108 608 25 HOH HOH . H 6 HOH A 109 609 44 HOH HOH . H 6 HOH A 110 610 111 HOH HOH . H 6 HOH A 111 611 65 HOH HOH . H 6 HOH A 112 612 90 HOH HOH . H 6 HOH A 113 613 39 HOH HOH . H 6 HOH A 114 614 69 HOH HOH . H 6 HOH A 115 615 59 HOH HOH . H 6 HOH A 116 616 124 HOH HOH . H 6 HOH A 117 617 262 HOH HOH . H 6 HOH A 118 618 175 HOH HOH . H 6 HOH A 119 619 150 HOH HOH . H 6 HOH A 120 620 155 HOH HOH . H 6 HOH A 121 621 143 HOH HOH . H 6 HOH A 122 622 138 HOH HOH . H 6 HOH A 123 623 221 HOH HOH . H 6 HOH A 124 624 225 HOH HOH . H 6 HOH A 125 625 133 HOH HOH . H 6 HOH A 126 626 178 HOH HOH . H 6 HOH A 127 627 169 HOH HOH . H 6 HOH A 128 628 15 HOH HOH . H 6 HOH A 129 629 239 HOH HOH . H 6 HOH A 130 630 156 HOH HOH . H 6 HOH A 131 631 116 HOH HOH . H 6 HOH A 132 632 45 HOH HOH . H 6 HOH A 133 633 10 HOH HOH . H 6 HOH A 134 634 174 HOH HOH . H 6 HOH A 135 635 257 HOH HOH . H 6 HOH A 136 636 128 HOH HOH . H 6 HOH A 137 637 19 HOH HOH . H 6 HOH A 138 638 203 HOH HOH . H 6 HOH A 139 639 3 HOH HOH . H 6 HOH A 140 640 73 HOH HOH . H 6 HOH A 141 641 234 HOH HOH . H 6 HOH A 142 642 42 HOH HOH . H 6 HOH A 143 643 120 HOH HOH . H 6 HOH A 144 644 172 HOH HOH . H 6 HOH A 145 645 14 HOH HOH . H 6 HOH A 146 646 131 HOH HOH . H 6 HOH A 147 647 249 HOH HOH . H 6 HOH A 148 648 188 HOH HOH . H 6 HOH A 149 649 162 HOH HOH . H 6 HOH A 150 650 49 HOH HOH . H 6 HOH A 151 651 205 HOH HOH . H 6 HOH A 152 652 20 HOH HOH . H 6 HOH A 153 653 118 HOH HOH . H 6 HOH A 154 654 22 HOH HOH . H 6 HOH A 155 655 232 HOH HOH . H 6 HOH A 156 656 16 HOH HOH . H 6 HOH A 157 657 255 HOH HOH . H 6 HOH A 158 658 137 HOH HOH . H 6 HOH A 159 659 164 HOH HOH . H 6 HOH A 160 660 84 HOH HOH . H 6 HOH A 161 661 187 HOH HOH . H 6 HOH A 162 662 115 HOH HOH . H 6 HOH A 163 663 18 HOH HOH . H 6 HOH A 164 664 98 HOH HOH . H 6 HOH A 165 665 132 HOH HOH . H 6 HOH A 166 666 119 HOH HOH . H 6 HOH A 167 667 208 HOH HOH . H 6 HOH A 168 668 158 HOH HOH . H 6 HOH A 169 669 52 HOH HOH . H 6 HOH A 170 670 177 HOH HOH . H 6 HOH A 171 671 161 HOH HOH . H 6 HOH A 172 672 91 HOH HOH . H 6 HOH A 173 673 117 HOH HOH . H 6 HOH A 174 674 80 HOH HOH . H 6 HOH A 175 675 126 HOH HOH . H 6 HOH A 176 676 47 HOH HOH . H 6 HOH A 177 677 152 HOH HOH . H 6 HOH A 178 678 176 HOH HOH . H 6 HOH A 179 679 244 HOH HOH . H 6 HOH A 180 680 37 HOH HOH . H 6 HOH A 181 681 75 HOH HOH . H 6 HOH A 182 682 142 HOH HOH . H 6 HOH A 183 683 259 HOH HOH . H 6 HOH A 184 684 53 HOH HOH . H 6 HOH A 185 685 63 HOH HOH . H 6 HOH A 186 686 196 HOH HOH . H 6 HOH A 187 687 140 HOH HOH . H 6 HOH A 188 688 171 HOH HOH . H 6 HOH A 189 689 241 HOH HOH . H 6 HOH A 190 690 223 HOH HOH . H 6 HOH A 191 691 2 HOH HOH . H 6 HOH A 192 692 248 HOH HOH . H 6 HOH A 193 693 226 HOH HOH . H 6 HOH A 194 694 102 HOH HOH . H 6 HOH A 195 695 240 HOH HOH . H 6 HOH A 196 696 237 HOH HOH . H 6 HOH A 197 697 57 HOH HOH . H 6 HOH A 198 698 263 HOH HOH . H 6 HOH A 199 699 198 HOH HOH . H 6 HOH A 200 700 58 HOH HOH . H 6 HOH A 201 701 32 HOH HOH . H 6 HOH A 202 702 83 HOH HOH . H 6 HOH A 203 703 139 HOH HOH . H 6 HOH A 204 704 151 HOH HOH . H 6 HOH A 205 705 88 HOH HOH . H 6 HOH A 206 706 206 HOH HOH . H 6 HOH A 207 707 48 HOH HOH . H 6 HOH A 208 708 230 HOH HOH . H 6 HOH A 209 709 50 HOH HOH . H 6 HOH A 210 710 182 HOH HOH . H 6 HOH A 211 711 220 HOH HOH . H 6 HOH A 212 712 250 HOH HOH . H 6 HOH A 213 713 92 HOH HOH . H 6 HOH A 214 714 193 HOH HOH . H 6 HOH A 215 715 36 HOH HOH . H 6 HOH A 216 716 130 HOH HOH . H 6 HOH A 217 717 141 HOH HOH . H 6 HOH A 218 718 122 HOH HOH . H 6 HOH A 219 719 199 HOH HOH . H 6 HOH A 220 720 149 HOH HOH . H 6 HOH A 221 721 97 HOH HOH . H 6 HOH A 222 722 167 HOH HOH . H 6 HOH A 223 723 160 HOH HOH . H 6 HOH A 224 724 209 HOH HOH . H 6 HOH A 225 725 231 HOH HOH . H 6 HOH A 226 726 163 HOH HOH . H 6 HOH A 227 727 110 HOH HOH . H 6 HOH A 228 728 267 HOH HOH . H 6 HOH A 229 729 186 HOH HOH . H 6 HOH A 230 730 251 HOH HOH . H 6 HOH A 231 731 201 HOH HOH . H 6 HOH A 232 732 173 HOH HOH . H 6 HOH A 233 733 179 HOH HOH . H 6 HOH A 234 734 93 HOH HOH . H 6 HOH A 235 735 258 HOH HOH . H 6 HOH A 236 736 129 HOH HOH . H 6 HOH A 237 737 191 HOH HOH . H 6 HOH A 238 738 228 HOH HOH . H 6 HOH A 239 739 85 HOH HOH . H 6 HOH A 240 740 202 HOH HOH . H 6 HOH A 241 741 200 HOH HOH . H 6 HOH A 242 742 213 HOH HOH . H 6 HOH A 243 743 207 HOH HOH . H 6 HOH A 244 744 264 HOH HOH . H 6 HOH A 245 745 265 HOH HOH . H 6 HOH A 246 746 104 HOH HOH . H 6 HOH A 247 747 229 HOH HOH . H 6 HOH A 248 748 82 HOH HOH . H 6 HOH A 249 749 189 HOH HOH . H 6 HOH A 250 750 184 HOH HOH . H 6 HOH A 251 751 121 HOH HOH . H 6 HOH A 252 752 154 HOH HOH . H 6 HOH A 253 753 180 HOH HOH . H 6 HOH A 254 754 214 HOH HOH . H 6 HOH A 255 755 194 HOH HOH . H 6 HOH A 256 756 204 HOH HOH . H 6 HOH A 257 757 170 HOH HOH . H 6 HOH A 258 758 224 HOH HOH . H 6 HOH A 259 759 159 HOH HOH . H 6 HOH A 260 760 183 HOH HOH . H 6 HOH A 261 761 56 HOH HOH . H 6 HOH A 262 762 222 HOH HOH . H 6 HOH A 263 763 211 HOH HOH . H 6 HOH A 264 764 210 HOH HOH . H 6 HOH A 265 765 212 HOH HOH . H 6 HOH A 266 766 215 HOH HOH . H 6 HOH A 267 767 227 HOH HOH . H 6 HOH A 268 768 218 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -19.906 _atom_site.Cartn_y -17.493 _atom_site.Cartn_z -21.295 _atom_site.occupancy 0.74 _atom_site.B_iso_or_equiv 25.31 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #