data_6R1V # _model_server_result.job_id SoRitrDqS5wyVi6RGKXTQw _model_server_result.datetime_utc '2025-09-12 16:27:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6R1V # _exptl.entry_id 6R1V _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 238.26 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-(hydroxymethyl)-3-oxidanyl-2-(thiophen-3-ylmethyl)pyran-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R1V _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 126 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 126 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C7 _struct_conn.ptnr2_label_comp_id JPT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id JPT _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.78 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H10 O4 S' _chem_comp.formula_weight 238.26 _chem_comp.id JPT _chem_comp.mon_nstd_flag . _chem_comp.name 6-(hydroxymethyl)-3-oxidanyl-2-(thiophen-3-ylmethyl)pyran-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C6 JPT sing 171 n n C6 C3 JPT sing 172 n n C3 O1 JPT sing 173 n n C3 C2 JPT doub 174 n n O1 C4 JPT sing 175 n n C2 C1 JPT sing 176 n n C13 C12 JPT doub 177 n y C13 C8 JPT sing 178 n y C12 S2 JPT sing 179 n y C4 C7 JPT sing 180 n n C4 C5 JPT doub 181 n n C1 C5 JPT sing 182 n n C1 O2 JPT doub 183 n n C8 C7 JPT sing 184 n n C8 C11 JPT doub 185 n y C5 O4 JPT sing 186 n n S2 C11 JPT sing 187 n y C7 H7 JPT sing 188 n n C7 H1 JPT sing 189 n n C11 H11 JPT sing 190 n n C12 H12 JPT sing 191 n n C13 H13 JPT sing 192 n n C6 H62 JPT sing 193 n n C6 H61 JPT sing 194 n n O3 H3 JPT sing 195 n n O4 H4 JPT sing 196 n n C2 H2 JPT sing 197 n n # _atom_sites.entry_id 6R1V _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id JPT _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 201 _pdbx_nonpoly_scheme.pdb_mon_id JPT _pdbx_nonpoly_scheme.auth_mon_id UNK _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 JPT . . . B 2 -2.722 8.07 26.54 1 0 ? C7 JPT 201 A 1 HETATM 2 C C8 JPT . . . B 2 -2.021 6.715 26.398 1 0 ? C8 JPT 201 A 1 HETATM 3 C C11 JPT . . . B 2 -2.178 5.738 27.313 1 0 ? C11 JPT 201 A 1 HETATM 4 S S2 JPT . . . B 2 -1.266 4.457 26.779 1 0 ? S2 JPT 201 A 1 HETATM 5 C C12 JPT . . . B 2 -0.675 5.156 25.387 1 0 ? C12 JPT 201 A 1 HETATM 6 C C13 JPT . . . B 2 -1.19 6.414 25.32 1 0 ? C13 JPT 201 A 1 HETATM 7 C C6 JPT . . . B 2 -5.421 7.332 22.749 1 0 ? C6 JPT 201 A 1 HETATM 8 O O3 JPT . . . B 2 -5.116 8.415 21.867 1 0 ? O3 JPT 201 A 1 HETATM 9 C C5 JPT . . . B 2 -5.144 8.263 26.696 1 0 ? C5 JPT 201 A 1 HETATM 10 C C4 JPT . . . B 2 -3.988 8.001 25.972 1 0 ? C4 JPT 201 A 1 HETATM 11 O O4 JPT . . . B 2 -5.072 8.329 28.053 1 0 ? O4 JPT 201 A 1 HETATM 12 C C1 JPT . . . B 2 -6.344 8.502 26.09 1 0 ? C1 JPT 201 A 1 HETATM 13 O O2 JPT . . . B 2 -7.315 8.929 26.718 1 0 ? O2 JPT 201 A 1 HETATM 14 C C2 JPT . . . B 2 -6.429 8.261 24.742 1 0 ? C2 JPT 201 A 1 HETATM 15 C C3 JPT . . . B 2 -5.319 7.757 24.069 1 0 ? C3 JPT 201 A 1 HETATM 16 O O1 JPT . . . B 2 -4.065 7.623 24.643 1 0 ? O1 JPT 201 A 1 HETATM 17 H H1 JPT . . . B 2 -2.822 8.302 27.601 1 0 ? H1 JPT 201 A 1 HETATM 18 H H11 JPT . . . B 2 -2.784 5.782 28.222 1 0 ? H11 JPT 201 A 1 HETATM 19 H H12 JPT . . . B 2 -0.001 4.694 24.671 1 0 ? H12 JPT 201 A 1 HETATM 20 H H13 JPT . . . B 2 -0.977 7.107 24.508 1 0 ? H13 JPT 201 A 1 HETATM 21 H H62 JPT . . . B 2 -4.718 6.513 22.584 1 0 ? H62 JPT 201 A 1 HETATM 22 H H61 JPT . . . B 2 -6.432 6.976 22.556 1 0 ? H61 JPT 201 A 1 HETATM 23 H H3 JPT . . . B 2 -4.184 8.734 22.039 1 0 ? H3 JPT 201 A 1 HETATM 24 H H4 JPT . . . B 2 -5.977 8.537 28.426 1 0 ? H4 JPT 201 A 1 HETATM 25 H H2 JPT . . . B 2 -7.354 8.466 24.205 1 0 ? H2 JPT 201 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 6661 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #