data_6R26 # _model_server_result.job_id -fUzjWOyDKUnet6Lf8OzRA _model_server_result.datetime_utc '2024-10-19 08:24:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r26 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6R26 # _exptl.entry_id 6R26 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 598.689 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[2-[(~{Z})-[12-ethyl-6-(3-hydroxy-3-oxopropyl)-13-methyl-11-oxidanylidene-4,10-diazatricyclo[8.3.0.0^{3,7}]trideca-1,3,6,12-tetraen-5-ylidene]methyl]-5-[(~{Z})-(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R26 _cell.length_a 174.445 _cell.length_b 174.445 _cell.length_c 79.067 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R26 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 16_555 -y+1/2,-x+1/2,-z+1/2 0 -1 0 -1 0 0 0 0 -1 87.2225 87.2225 39.5335 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 20 A CYS 20 1_555 B CBC JQ2 . A JQ2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.838 ? covale ? covale2 A C LEU 126 A LEU 126 1_555 A N MSE 127 A MSE 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale3 A C MSE 127 A MSE 127 1_555 A N GLY 128 A GLY 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale4 A C ARG 212 A ARG 212 1_555 A N MSE 213 A MSE 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale5 A C MSE 213 A MSE 213 1_555 A N ILE 214 A ILE 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 A C ASP 237 A ASP 237 1_555 A N MSE 238 A MSE 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale7 A C MSE 238 A MSE 238 1_555 A N SER 239 A SER 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale8 A C TYR 253 A TYR 253 1_555 A N MSE 254 A MSE 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale9 A C MSE 254 A MSE 254 1_555 A N ARG 255 A ARG 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale10 A C ASN 256 A ASN 256 1_555 A N MSE 257 A MSE 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale11 A C MSE 257 A MSE 257 1_555 A N GLY 258 A GLY 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale12 A C SER 262 A SER 262 1_555 A N MSE 263 A MSE 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 A C MSE 263 A MSE 263 1_555 A N SER 264 A SER 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale14 A C SER 303 A SER 303 1_555 A N MSE 304 A MSE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale15 A C MSE 304 A MSE 304 1_555 A N ARG 305 A ARG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale16 A C ALA 307 A ALA 307 1_555 A N MSE 308 A MSE 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale17 A C MSE 308 A MSE 308 1_555 A N GLU 309 A GLU 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale18 A C GLY 331 A GLY 331 1_555 A N MSE 332 A MSE 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale19 A C MSE 332 A MSE 332 1_555 A N ALA 333 A ALA 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale20 A C ALA 421 A ALA 421 1_555 A N MSE 422 A MSE 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale21 A C MSE 422 A MSE 422 1_555 A N ARG 423 A ARG 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? metalc ? metalc1 A OD1 ASP 167 A ASP 167 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc2 A O PHE 168 A PHE 168 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? # _chem_comp.formula 'C34 H38 N4 O6' _chem_comp.formula_weight 598.689 _chem_comp.id JQ2 _chem_comp.mon_nstd_flag . _chem_comp.name '3-[2-[(~{Z})-[12-ethyl-6-(3-hydroxy-3-oxopropyl)-13-methyl-11-oxidanylidene-4,10-diazatricyclo[8.3.0.0^{3,7}]trideca-1,3,6,12-tetraen-5-ylidene]methyl]-5-[(~{Z})-(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBB CAB JQ2 sing 171 n n CAB C3B JQ2 sing 172 n n O_B C4B JQ2 doub 173 n n C3B C4B JQ2 sing 174 n n C3B C2B JQ2 doub 175 n n C4B N_B JQ2 sing 176 n n CMB C2B JQ2 sing 177 n n C2B C1B JQ2 sing 178 n n N_B C1B JQ2 sing 179 n n N_B CEB JQ2 sing 180 n n C1B CHB JQ2 doub 181 n n CEB CEA JQ2 sing 182 n n CHB C4A JQ2 sing 183 n n CEA C3A JQ2 sing 184 n n C4A C3A JQ2 sing 185 n n C4A N_A JQ2 doub 186 n n O_C C1C JQ2 doub 187 n n C3A C2A JQ2 doub 188 n n O1A CGA JQ2 doub 189 n n N_A C1A JQ2 sing 190 n n O2A CGA JQ2 sing 191 n n C1C C2C JQ2 sing 192 n n C1C N_C JQ2 sing 193 n n CGA CBA JQ2 sing 194 n n C2A C1A JQ2 sing 195 n n C2A CAA JQ2 sing 196 n n CMC C2C JQ2 sing 197 n n C2C C3C JQ2 doub 198 n n C1A CHA JQ2 doub 199 z n N_C C4C JQ2 sing 200 n n CAA CBA JQ2 sing 201 n n C3C C4C JQ2 sing 202 n n C3C CAC JQ2 sing 203 n n C4C CHD JQ2 doub 204 z n CHA C4D JQ2 sing 205 n n N_D C4D JQ2 sing 206 n y N_D C1D JQ2 sing 207 n y C4D C3D JQ2 doub 208 n y CHD C1D JQ2 sing 209 n n C1D C2D JQ2 doub 210 n y CAC CBC JQ2 sing 211 n n C3D C2D JQ2 sing 212 n y C3D CAD JQ2 sing 213 n n C2D CMD JQ2 sing 214 n n CBD CAD JQ2 sing 215 n n CBD CGD JQ2 sing 216 n n O1D CGD JQ2 doub 217 n n CGD O2D JQ2 sing 218 n n O2A H1 JQ2 sing 219 n n CBA H2 JQ2 sing 220 n n CBA H3 JQ2 sing 221 n n CAA H4 JQ2 sing 222 n n CAA H5 JQ2 sing 223 n n CEA H6 JQ2 sing 224 n n CEA H7 JQ2 sing 225 n n CEB H8 JQ2 sing 226 n n CEB H9 JQ2 sing 227 n n CAB H10 JQ2 sing 228 n n CAB H11 JQ2 sing 229 n n CBB H12 JQ2 sing 230 n n CBB H13 JQ2 sing 231 n n CBB H14 JQ2 sing 232 n n CMB H15 JQ2 sing 233 n n CMB H16 JQ2 sing 234 n n CMB H17 JQ2 sing 235 n n CHB H19 JQ2 sing 236 n n CHA H22 JQ2 sing 237 n n N_D H24 JQ2 sing 238 n n CAD H25 JQ2 sing 239 n n CAD H26 JQ2 sing 240 n n CBD H27 JQ2 sing 241 n n CBD H28 JQ2 sing 242 n n O2D H29 JQ2 sing 243 n n CMD H30 JQ2 sing 244 n n CMD H31 JQ2 sing 245 n n CMD H32 JQ2 sing 246 n n CHD H33 JQ2 sing 247 n n CMC H35 JQ2 sing 248 n n CMC H36 JQ2 sing 249 n n CMC H37 JQ2 sing 250 n n CAC H38 JQ2 sing 251 n n CAC H39 JQ2 sing 252 n n CBC H40 JQ2 sing 253 n n CBC H41 JQ2 sing 254 n n CBC H42 JQ2 sing 255 n n N_C H18 JQ2 sing 256 n n # _atom_sites.entry_id 6R26 _atom_sites.fract_transf_matrix[1][1] 0.005732 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005732 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012648 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JQ2 A 1 601 601 JQ2 ZA . C 3 CA A 1 602 602 CA CA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2A JQ2 . . . B 2 33.655 21.31 21.685 1 89.4 ? O2A JQ2 601 A 1 HETATM 2 C CGA JQ2 . . . B 2 32.77 20.431 21.838 1 95.29 ? CGA JQ2 601 A 1 HETATM 3 O O1A JQ2 . . . B 2 32.614 19.411 21.123 1 103.05 ? O1A JQ2 601 A 1 HETATM 4 C CBA JQ2 . . . B 2 31.788 20.605 23.011 1 91.81 ? CBA JQ2 601 A 1 HETATM 5 C CAA JQ2 . . . B 2 30.982 21.903 22.883 1 90.73 ? CAA JQ2 601 A 1 HETATM 6 C C2A JQ2 . . . B 2 29.661 21.698 22.11 1 89.34 ? C2A JQ2 601 A 1 HETATM 7 C C3A JQ2 . . . B 2 29.508 21.941 20.809 1 88.92 ? C3A JQ2 601 A 1 HETATM 8 C CEA JQ2 . . . B 2 30.519 22.415 19.96 1 91.74 ? CEA JQ2 601 A 1 HETATM 9 C CEB JQ2 . . . B 2 30.512 21.669 18.627 1 95.91 ? CEB JQ2 601 A 1 HETATM 10 N N_B JQ2 . . . B 2 29.423 22.154 17.765 1 98.8 ? N_B JQ2 601 A 1 HETATM 11 C C4B JQ2 . . . B 2 29.503 22.645 16.526 1 100.97 ? C4B JQ2 601 A 1 HETATM 12 O O_B JQ2 . . . B 2 30.535 22.787 15.866 1 94.75 ? O_B JQ2 601 A 1 HETATM 13 C C3B JQ2 . . . B 2 28.279 22.962 16.119 1 105.9 ? C3B JQ2 601 A 1 HETATM 14 C CAB JQ2 . . . B 2 27.943 23.476 14.937 1 110.94 ? CAB JQ2 601 A 1 HETATM 15 C CBB JQ2 . . . B 2 28.53 24.808 14.489 1 116.11 ? CBB JQ2 601 A 1 HETATM 16 C C2B JQ2 . . . B 2 27.433 22.668 17.1 1 104.88 ? C2B JQ2 601 A 1 HETATM 17 C CMB JQ2 . . . B 2 25.913 22.894 17.022 1 102.27 ? CMB JQ2 601 A 1 HETATM 18 C C1B JQ2 . . . B 2 28.135 22.166 18.13 1 102.97 ? C1B JQ2 601 A 1 HETATM 19 C CHB JQ2 . . . B 2 27.591 21.759 19.288 1 98.37 ? CHB JQ2 601 A 1 HETATM 20 C C4A JQ2 . . . B 2 28.243 21.663 20.515 1 93.88 ? C4A JQ2 601 A 1 HETATM 21 N N_A JQ2 . . . B 2 27.607 21.246 21.618 1 95 ? N_A JQ2 601 A 1 HETATM 22 C C1A JQ2 . . . B 2 28.491 21.264 22.62 1 93.91 ? C1A JQ2 601 A 1 HETATM 23 C CHA JQ2 . . . B 2 28.3 20.985 23.93 1 95.65 ? CHA JQ2 601 A 1 HETATM 24 C C4D JQ2 . . . B 2 27.175 20.511 24.52 1 97.35 ? C4D JQ2 601 A 1 HETATM 25 N N_D JQ2 . . . B 2 25.97 20.206 24.003 1 104.17 ? N_D JQ2 601 A 1 HETATM 26 C C3D JQ2 . . . B 2 27.106 20.278 25.842 1 96.68 ? C3D JQ2 601 A 1 HETATM 27 C CAD JQ2 . . . B 2 28.213 20.49 26.886 1 96.61 ? CAD JQ2 601 A 1 HETATM 28 C CBD JQ2 . . . B 2 29.25 19.368 26.811 1 95.43 ? CBD JQ2 601 A 1 HETATM 29 C CGD JQ2 . . . B 2 30.103 19.395 28.076 1 94.22 ? CGD JQ2 601 A 1 HETATM 30 O O1D JQ2 . . . B 2 31.299 19.732 27.965 1 92.01 ? O1D JQ2 601 A 1 HETATM 31 O O2D JQ2 . . . B 2 29.534 19.078 29.136 1 97.96 ? O2D JQ2 601 A 1 HETATM 32 C C2D JQ2 . . . B 2 25.899 19.833 26.142 1 95.47 ? C2D JQ2 601 A 1 HETATM 33 C CMD JQ2 . . . B 2 25.401 19.452 27.544 1 97.54 ? CMD JQ2 601 A 1 HETATM 34 C C1D JQ2 . . . B 2 25.198 19.779 25.02 1 103.81 ? C1D JQ2 601 A 1 HETATM 35 C CHD JQ2 . . . B 2 23.861 19.351 24.994 1 109.02 ? CHD JQ2 601 A 1 HETATM 36 C C4C JQ2 . . . B 2 23.158 19.154 23.87 1 113.25 ? C4C JQ2 601 A 1 HETATM 37 N N_C JQ2 . . . B 2 23.639 19.293 22.623 1 111.91 ? N_C JQ2 601 A 1 HETATM 38 C C1C JQ2 . . . B 2 22.638 18.991 21.796 1 114.23 ? C1C JQ2 601 A 1 HETATM 39 O O_C JQ2 . . . B 2 22.679 19.011 20.565 1 112.47 ? O_C JQ2 601 A 1 HETATM 40 C C2C JQ2 . . . B 2 21.528 18.658 22.553 1 111.86 ? C2C JQ2 601 A 1 HETATM 41 C CMC JQ2 . . . B 2 20.125 18.224 22.115 1 102.94 ? CMC JQ2 601 A 1 HETATM 42 C C3C JQ2 . . . B 2 21.866 18.768 23.842 1 114.27 ? C3C JQ2 601 A 1 HETATM 43 C CAC JQ2 . . . B 2 20.979 18.495 25.077 1 115.97 ? CAC JQ2 601 A 1 HETATM 44 C CBC JQ2 . . . B 2 19.582 19.13 25.086 1 120.92 ? CBC JQ2 601 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 44 #