data_6R39 # _model_server_result.job_id bRai2JYqeTBFrI1yZrLx0A _model_server_result.datetime_utc '2024-11-15 05:00:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r39 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6R39 # _exptl.entry_id 6R39 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 269.252 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-(carboxymethyl)-1H-benzo[g]indole-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6R39 _cell.length_a 61.336 _cell.length_b 61.336 _cell.length_c 340.077 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R39 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H11 N O4' _chem_comp.formula_weight 269.252 _chem_comp.id BFH _chem_comp.mon_nstd_flag . _chem_comp.name '1-(carboxymethyl)-1H-benzo[g]indole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O1 BFH sing 70 n n O1 HO1 BFH sing 71 n n O3 C2 BFH doub 72 n n C2 C4 BFH sing 73 n n N5 C4 BFH sing 74 n n C4 H4 BFH sing 75 n n C4 H4A BFH sing 76 n n C6 N5 BFH sing 77 n y C17 N5 BFH sing 78 n y C7 C6 BFH doub 79 n y C18 C6 BFH sing 80 n n C7 C8 BFH sing 81 n y C7 H7 BFH sing 82 n n C9 C8 BFH doub 83 n y C8 C17 BFH sing 84 n y C9 C10 BFH sing 85 n y C9 H9 BFH sing 86 n n C10 C11 BFH doub 87 n y C10 H10 BFH sing 88 n n C11 C16 BFH sing 89 n y C11 C12 BFH sing 90 n y C12 C13 BFH doub 91 n y C12 H12 BFH sing 92 n n C13 C14 BFH sing 93 n y C13 H13 BFH sing 94 n n C15 C14 BFH doub 95 n y C14 H14 BFH sing 96 n n C16 C15 BFH sing 97 n y C15 H15 BFH sing 98 n n C17 C16 BFH doub 99 n y O19 C18 BFH doub 100 n n C18 O20 BFH sing 101 n n O20 HO20 BFH sing 102 n n # _atom_sites.entry_id 6R39 _atom_sites.fract_transf_matrix[1][1] 0.016304 _atom_sites.fract_transf_matrix[1][2] 0.009413 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018826 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002941 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BFH A 1 401 401 BFH LI1 . C 3 HOH A 1 501 1 HOH HOH . C 3 HOH A 2 502 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 BFH . . . B 2 5.372 20.424 -9.371 0.9 145.9 ? O1 BFH 401 A 1 HETATM 2 C C2 BFH . . . B 2 5.404 19.352 -9.94 0.9 143.72 ? C2 BFH 401 A 1 HETATM 3 O O3 BFH . . . B 2 4.673 18.31 -9.518 0.9 143.97 ? O3 BFH 401 A 1 HETATM 4 C C4 BFH . . . B 2 6.288 19.139 -11.149 0.9 140.89 ? C4 BFH 401 A 1 HETATM 5 N N5 BFH . . . B 2 6.031 20.095 -12.247 0.9 137.5 ? N5 BFH 401 A 1 HETATM 6 C C6 BFH . . . B 2 6.855 21.099 -12.549 0.9 137.82 ? C6 BFH 401 A 1 HETATM 7 C C7 BFH . . . B 2 6.375 21.807 -13.582 0.9 133.88 ? C7 BFH 401 A 1 HETATM 8 C C8 BFH . . . B 2 5.116 21.118 -14.011 0.9 131.1 ? C8 BFH 401 A 1 HETATM 9 C C9 BFH . . . B 2 4.2 21.439 -15.015 0.9 129.52 ? C9 BFH 401 A 1 HETATM 10 C C10 BFH . . . B 2 3.089 20.596 -15.149 0.9 127.8 ? C10 BFH 401 A 1 HETATM 11 C C11 BFH . . . B 2 2.917 19.501 -14.279 0.9 126.11 ? C11 BFH 401 A 1 HETATM 12 C C12 BFH . . . B 2 1.792 18.687 -14.494 0.9 125.54 ? C12 BFH 401 A 1 HETATM 13 C C13 BFH . . . B 2 1.534 17.587 -13.67 0.9 123.22 ? C13 BFH 401 A 1 HETATM 14 C C14 BFH . . . B 2 2.429 17.298 -12.64 0.9 122.21 ? C14 BFH 401 A 1 HETATM 15 C C15 BFH . . . B 2 3.594 18.051 -12.482 0.9 122.8 ? C15 BFH 401 A 1 HETATM 16 C C16 BFH . . . B 2 3.874 19.171 -13.282 0.9 125.29 ? C16 BFH 401 A 1 HETATM 17 C C17 BFH . . . B 2 4.997 20.028 -13.147 0.9 130.98 ? C17 BFH 401 A 1 HETATM 18 C C18 BFH . . . B 2 8.055 21.593 -11.823 0.9 139.7 ? C18 BFH 401 A 1 HETATM 19 O O19 BFH . . . B 2 8.157 22.9 -11.533 0.9 138.38 ? O19 BFH 401 A 1 HETATM 20 O O20 BFH . . . B 2 8.936 20.818 -11.484 0.9 141.26 ? O20 BFH 401 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #