data_6R3Z # _model_server_result.job_id I2WaK1pL2ijVQb19ftxDkA _model_server_result.datetime_utc '2024-11-29 02:38:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r3z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":408}' # _entry.id 6R3Z # _exptl.entry_id 6R3Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R3Z _cell.length_a 43.57 _cell.length_b 62.69 _cell.length_c 90.54 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R3Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 41 A HIS 77 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc2 A NE2 HIS 66 A HIS 102 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc3 A NE2 HIS 111 A HIS 147 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc4 A NE2 HIS 177 A HIS 213 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc5 A NE2 HIS 199 A HIS 235 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc6 A NE2 HIS 250 A HIS 286 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6R3Z _atom_sites.fract_transf_matrix[1][1] 0.022952 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015952 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 401 1 NI NI2 . C 3 EDO A 1 402 2 EDO EDO . D 3 EDO A 1 403 3 EDO EDO . E 3 EDO A 1 404 5 EDO EDO . F 3 EDO A 1 405 6 EDO EDO . G 3 EDO A 1 406 7 EDO EDO . H 3 EDO A 1 407 8 EDO EDO . I 3 EDO A 1 408 9 EDO EDO . J 4 HOH A 1 501 173 HOH HOH . J 4 HOH A 2 502 49 HOH HOH . J 4 HOH A 3 503 267 HOH HOH . J 4 HOH A 4 504 65 HOH HOH . J 4 HOH A 5 505 188 HOH HOH . J 4 HOH A 6 506 126 HOH HOH . J 4 HOH A 7 507 95 HOH HOH . J 4 HOH A 8 508 53 HOH HOH . J 4 HOH A 9 509 251 HOH HOH . J 4 HOH A 10 510 194 HOH HOH . J 4 HOH A 11 511 25 HOH HOH . J 4 HOH A 12 512 275 HOH HOH . J 4 HOH A 13 513 22 HOH HOH . J 4 HOH A 14 514 28 HOH HOH . J 4 HOH A 15 515 39 HOH HOH . J 4 HOH A 16 516 56 HOH HOH . J 4 HOH A 17 517 207 HOH HOH . J 4 HOH A 18 518 140 HOH HOH . J 4 HOH A 19 519 110 HOH HOH . J 4 HOH A 20 520 297 HOH HOH . J 4 HOH A 21 521 292 HOH HOH . J 4 HOH A 22 522 15 HOH HOH . J 4 HOH A 23 523 67 HOH HOH . J 4 HOH A 24 524 269 HOH HOH . J 4 HOH A 25 525 128 HOH HOH . J 4 HOH A 26 526 17 HOH HOH . J 4 HOH A 27 527 136 HOH HOH . J 4 HOH A 28 528 182 HOH HOH . J 4 HOH A 29 529 23 HOH HOH . J 4 HOH A 30 530 19 HOH HOH . J 4 HOH A 31 531 181 HOH HOH . J 4 HOH A 32 532 176 HOH HOH . J 4 HOH A 33 533 43 HOH HOH . J 4 HOH A 34 534 74 HOH HOH . J 4 HOH A 35 535 14 HOH HOH . J 4 HOH A 36 536 114 HOH HOH . J 4 HOH A 37 537 135 HOH HOH . J 4 HOH A 38 538 54 HOH HOH . J 4 HOH A 39 539 253 HOH HOH . J 4 HOH A 40 540 256 HOH HOH . J 4 HOH A 41 541 145 HOH HOH . J 4 HOH A 42 542 227 HOH HOH . J 4 HOH A 43 543 6 HOH HOH . J 4 HOH A 44 544 190 HOH HOH . J 4 HOH A 45 545 26 HOH HOH . J 4 HOH A 46 546 153 HOH HOH . J 4 HOH A 47 547 4 HOH HOH . J 4 HOH A 48 548 138 HOH HOH . J 4 HOH A 49 549 81 HOH HOH . J 4 HOH A 50 550 57 HOH HOH . J 4 HOH A 51 551 113 HOH HOH . J 4 HOH A 52 552 47 HOH HOH . J 4 HOH A 53 553 222 HOH HOH . J 4 HOH A 54 554 274 HOH HOH . J 4 HOH A 55 555 88 HOH HOH . J 4 HOH A 56 556 180 HOH HOH . J 4 HOH A 57 557 215 HOH HOH . J 4 HOH A 58 558 255 HOH HOH . J 4 HOH A 59 559 202 HOH HOH . J 4 HOH A 60 560 123 HOH HOH . J 4 HOH A 61 561 89 HOH HOH . J 4 HOH A 62 562 103 HOH HOH . J 4 HOH A 63 563 44 HOH HOH . J 4 HOH A 64 564 71 HOH HOH . J 4 HOH A 65 565 291 HOH HOH . J 4 HOH A 66 566 45 HOH HOH . J 4 HOH A 67 567 32 HOH HOH . J 4 HOH A 68 568 10 HOH HOH . J 4 HOH A 69 569 191 HOH HOH . J 4 HOH A 70 570 11 HOH HOH . J 4 HOH A 71 571 245 HOH HOH . J 4 HOH A 72 572 294 HOH HOH . J 4 HOH A 73 573 280 HOH HOH . J 4 HOH A 74 574 124 HOH HOH . J 4 HOH A 75 575 64 HOH HOH . J 4 HOH A 76 576 129 HOH HOH . J 4 HOH A 77 577 282 HOH HOH . J 4 HOH A 78 578 29 HOH HOH . J 4 HOH A 79 579 252 HOH HOH . J 4 HOH A 80 580 58 HOH HOH . J 4 HOH A 81 581 149 HOH HOH . J 4 HOH A 82 582 235 HOH HOH . J 4 HOH A 83 583 61 HOH HOH . J 4 HOH A 84 584 31 HOH HOH . J 4 HOH A 85 585 16 HOH HOH . J 4 HOH A 86 586 265 HOH HOH . J 4 HOH A 87 587 83 HOH HOH . J 4 HOH A 88 588 189 HOH HOH . J 4 HOH A 89 589 108 HOH HOH . J 4 HOH A 90 590 30 HOH HOH . J 4 HOH A 91 591 75 HOH HOH . J 4 HOH A 92 592 223 HOH HOH . J 4 HOH A 93 593 66 HOH HOH . J 4 HOH A 94 594 36 HOH HOH . J 4 HOH A 95 595 3 HOH HOH . J 4 HOH A 96 596 285 HOH HOH . J 4 HOH A 97 597 122 HOH HOH . J 4 HOH A 98 598 242 HOH HOH . J 4 HOH A 99 599 35 HOH HOH . J 4 HOH A 100 600 86 HOH HOH . J 4 HOH A 101 601 283 HOH HOH . J 4 HOH A 102 602 200 HOH HOH . J 4 HOH A 103 603 18 HOH HOH . J 4 HOH A 104 604 174 HOH HOH . J 4 HOH A 105 605 272 HOH HOH . J 4 HOH A 106 606 48 HOH HOH . J 4 HOH A 107 607 68 HOH HOH . J 4 HOH A 108 608 120 HOH HOH . J 4 HOH A 109 609 41 HOH HOH . J 4 HOH A 110 610 193 HOH HOH . J 4 HOH A 111 611 9 HOH HOH . J 4 HOH A 112 612 77 HOH HOH . J 4 HOH A 113 613 159 HOH HOH . J 4 HOH A 114 614 287 HOH HOH . J 4 HOH A 115 615 144 HOH HOH . J 4 HOH A 116 616 69 HOH HOH . J 4 HOH A 117 617 175 HOH HOH . J 4 HOH A 118 618 20 HOH HOH . J 4 HOH A 119 619 62 HOH HOH . J 4 HOH A 120 620 163 HOH HOH . J 4 HOH A 121 621 151 HOH HOH . J 4 HOH A 122 622 94 HOH HOH . J 4 HOH A 123 623 78 HOH HOH . J 4 HOH A 124 624 59 HOH HOH . J 4 HOH A 125 625 220 HOH HOH . J 4 HOH A 126 626 80 HOH HOH . J 4 HOH A 127 627 257 HOH HOH . J 4 HOH A 128 628 40 HOH HOH . J 4 HOH A 129 629 34 HOH HOH . J 4 HOH A 130 630 234 HOH HOH . J 4 HOH A 131 631 27 HOH HOH . J 4 HOH A 132 632 60 HOH HOH . J 4 HOH A 133 633 147 HOH HOH . J 4 HOH A 134 634 82 HOH HOH . J 4 HOH A 135 635 51 HOH HOH . J 4 HOH A 136 636 213 HOH HOH . J 4 HOH A 137 637 102 HOH HOH . J 4 HOH A 138 638 21 HOH HOH . J 4 HOH A 139 639 131 HOH HOH . J 4 HOH A 140 640 93 HOH HOH . J 4 HOH A 141 641 177 HOH HOH . J 4 HOH A 142 642 79 HOH HOH . J 4 HOH A 143 643 90 HOH HOH . J 4 HOH A 144 644 37 HOH HOH . J 4 HOH A 145 645 7 HOH HOH . J 4 HOH A 146 646 8 HOH HOH . J 4 HOH A 147 647 52 HOH HOH . J 4 HOH A 148 648 229 HOH HOH . J 4 HOH A 149 649 277 HOH HOH . J 4 HOH A 150 650 117 HOH HOH . J 4 HOH A 151 651 85 HOH HOH . J 4 HOH A 152 652 63 HOH HOH . J 4 HOH A 153 653 137 HOH HOH . J 4 HOH A 154 654 168 HOH HOH . J 4 HOH A 155 655 260 HOH HOH . J 4 HOH A 156 656 13 HOH HOH . J 4 HOH A 157 657 109 HOH HOH . J 4 HOH A 158 658 84 HOH HOH . J 4 HOH A 159 659 262 HOH HOH . J 4 HOH A 160 660 172 HOH HOH . J 4 HOH A 161 661 46 HOH HOH . J 4 HOH A 162 662 259 HOH HOH . J 4 HOH A 163 663 72 HOH HOH . J 4 HOH A 164 664 42 HOH HOH . J 4 HOH A 165 665 55 HOH HOH . J 4 HOH A 166 666 258 HOH HOH . J 4 HOH A 167 667 230 HOH HOH . J 4 HOH A 168 668 139 HOH HOH . J 4 HOH A 169 669 225 HOH HOH . J 4 HOH A 170 670 271 HOH HOH . J 4 HOH A 171 671 233 HOH HOH . J 4 HOH A 172 672 12 HOH HOH . J 4 HOH A 173 673 5 HOH HOH . J 4 HOH A 174 674 205 HOH HOH . J 4 HOH A 175 675 212 HOH HOH . J 4 HOH A 176 676 281 HOH HOH . J 4 HOH A 177 677 2 HOH HOH . J 4 HOH A 178 678 38 HOH HOH . J 4 HOH A 179 679 169 HOH HOH . J 4 HOH A 180 680 268 HOH HOH . J 4 HOH A 181 681 171 HOH HOH . J 4 HOH A 182 682 286 HOH HOH . J 4 HOH A 183 683 70 HOH HOH . J 4 HOH A 184 684 121 HOH HOH . J 4 HOH A 185 685 146 HOH HOH . J 4 HOH A 186 686 250 HOH HOH . J 4 HOH A 187 687 76 HOH HOH . J 4 HOH A 188 688 73 HOH HOH . J 4 HOH A 189 689 105 HOH HOH . J 4 HOH A 190 690 288 HOH HOH . J 4 HOH A 191 691 125 HOH HOH . J 4 HOH A 192 692 196 HOH HOH . J 4 HOH A 193 693 179 HOH HOH . J 4 HOH A 194 694 226 HOH HOH . J 4 HOH A 195 695 209 HOH HOH . J 4 HOH A 196 696 183 HOH HOH . J 4 HOH A 197 697 155 HOH HOH . J 4 HOH A 198 698 279 HOH HOH . J 4 HOH A 199 699 184 HOH HOH . J 4 HOH A 200 700 157 HOH HOH . J 4 HOH A 201 701 107 HOH HOH . J 4 HOH A 202 702 264 HOH HOH . J 4 HOH A 203 703 203 HOH HOH . J 4 HOH A 204 704 161 HOH HOH . J 4 HOH A 205 705 228 HOH HOH . J 4 HOH A 206 706 278 HOH HOH . J 4 HOH A 207 707 273 HOH HOH . J 4 HOH A 208 708 91 HOH HOH . J 4 HOH A 209 709 154 HOH HOH . J 4 HOH A 210 710 266 HOH HOH . J 4 HOH A 211 711 111 HOH HOH . J 4 HOH A 212 712 192 HOH HOH . J 4 HOH A 213 713 199 HOH HOH . J 4 HOH A 214 714 185 HOH HOH . J 4 HOH A 215 715 247 HOH HOH . J 4 HOH A 216 716 219 HOH HOH . J 4 HOH A 217 717 289 HOH HOH . J 4 HOH A 218 718 298 HOH HOH . J 4 HOH A 219 719 290 HOH HOH . J 4 HOH A 220 720 170 HOH HOH . J 4 HOH A 221 721 178 HOH HOH . J 4 HOH A 222 722 162 HOH HOH . J 4 HOH A 223 723 270 HOH HOH . J 4 HOH A 224 724 130 HOH HOH . J 4 HOH A 225 725 156 HOH HOH . J 4 HOH A 226 726 143 HOH HOH . J 4 HOH A 227 727 150 HOH HOH . J 4 HOH A 228 728 141 HOH HOH . J 4 HOH A 229 729 208 HOH HOH . J 4 HOH A 230 730 92 HOH HOH . J 4 HOH A 231 731 296 HOH HOH . J 4 HOH A 232 732 106 HOH HOH . J 4 HOH A 233 733 99 HOH HOH . J 4 HOH A 234 734 50 HOH HOH . J 4 HOH A 235 735 197 HOH HOH . J 4 HOH A 236 736 284 HOH HOH . J 4 HOH A 237 737 165 HOH HOH . J 4 HOH A 238 738 276 HOH HOH . J 4 HOH A 239 739 210 HOH HOH . J 4 HOH A 240 740 142 HOH HOH . J 4 HOH A 241 741 204 HOH HOH . J 4 HOH A 242 742 195 HOH HOH . J 4 HOH A 243 743 116 HOH HOH . J 4 HOH A 244 744 198 HOH HOH . J 4 HOH A 245 745 240 HOH HOH . J 4 HOH A 246 746 295 HOH HOH . J 4 HOH A 247 747 201 HOH HOH . J 4 HOH A 248 748 293 HOH HOH . J 4 HOH A 249 749 166 HOH HOH . J 4 HOH A 250 750 132 HOH HOH . J 4 HOH A 251 751 133 HOH HOH . J 4 HOH A 252 752 148 HOH HOH . J 4 HOH A 253 753 216 HOH HOH . J 4 HOH A 254 754 239 HOH HOH . J 4 HOH A 255 755 206 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 3 -40.448 6.468 14.595 1 53.6 ? C1 EDO 408 A 1 HETATM 2 O O1 EDO . . . I 3 -39.339 6.968 15.33 1 53.17 ? O1 EDO 408 A 1 HETATM 3 C C2 EDO . . . I 3 -39.955 5.809 13.284 1 54.35 ? C2 EDO 408 A 1 HETATM 4 O O2 EDO . . . I 3 -39.21 6.742 12.504 1 54.23 ? O2 EDO 408 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #