data_6R4E # _model_server_result.job_id pdi3RBPWZ3SFa5IRREzUqQ _model_server_result.datetime_utc '2024-11-07 18:48:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r4e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6R4E # _exptl.entry_id 6R4E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description GLUCOSE-6-PHOSPHATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R4E _cell.length_a 153.847 _cell.length_b 153.847 _cell.length_c 166.292 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 242 A ASP 242 1_555 A N SEP 243 A SEP 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C SEP 243 A SEP 243 1_555 A N THR 244 A THR 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 B C ASP 242 B ASP 242 1_555 B N SEP 243 B SEP 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 B C SEP 243 B SEP 243 1_555 B N THR 244 B THR 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id G6Q _chem_comp.mon_nstd_flag . _chem_comp.name GLUCOSE-6-PHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 G6Q sing 83 n n C1 O1 G6Q doub 84 n n C1 H1 G6Q sing 85 n n C2 C3 G6Q sing 86 n n C2 O2 G6Q sing 87 n n C2 H2 G6Q sing 88 n n C3 C4 G6Q sing 89 n n C3 O3 G6Q sing 90 n n C3 H3 G6Q sing 91 n n C4 C5 G6Q sing 92 n n C4 O4 G6Q sing 93 n n C4 H4 G6Q sing 94 n n C5 C6 G6Q sing 95 n n C5 O5 G6Q sing 96 n n C5 H5 G6Q sing 97 n n C6 O6 G6Q sing 98 n n C6 H61 G6Q sing 99 n n C6 H62 G6Q sing 100 n n O2 HO2 G6Q sing 101 n n O3 HO3 G6Q sing 102 n n O4 HO4 G6Q sing 103 n n O5 HO5 G6Q sing 104 n n O6 P G6Q sing 105 n n P O1P G6Q doub 106 n n P O2P G6Q sing 107 n n P O3P G6Q sing 108 n n O2P HOP2 G6Q sing 109 n n O3P HOP3 G6Q sing 110 n n # _atom_sites.entry_id 6R4E _atom_sites.fract_transf_matrix[1][1] 0.0065 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0065 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G6Q A 1 701 1 G6Q G6Q . D 3 GLU A 1 702 1 GLU GLU . E 2 G6Q B 1 701 2 G6Q G6Q . F 4 HOH A 1 801 14 HOH HOH . F 4 HOH A 2 802 104 HOH HOH . F 4 HOH A 3 803 1 HOH HOH . F 4 HOH A 4 804 81 HOH HOH . F 4 HOH A 5 805 49 HOH HOH . F 4 HOH A 6 806 21 HOH HOH . F 4 HOH A 7 807 7 HOH HOH . F 4 HOH A 8 808 25 HOH HOH . F 4 HOH A 9 809 18 HOH HOH . F 4 HOH A 10 810 48 HOH HOH . F 4 HOH A 11 811 124 HOH HOH . F 4 HOH A 12 812 109 HOH HOH . F 4 HOH A 13 813 2 HOH HOH . F 4 HOH A 14 814 73 HOH HOH . F 4 HOH A 15 815 115 HOH HOH . F 4 HOH A 16 816 54 HOH HOH . F 4 HOH A 17 817 37 HOH HOH . F 4 HOH A 18 818 40 HOH HOH . F 4 HOH A 19 819 42 HOH HOH . F 4 HOH A 20 820 4 HOH HOH . F 4 HOH A 21 821 97 HOH HOH . F 4 HOH A 22 822 15 HOH HOH . F 4 HOH A 23 823 89 HOH HOH . F 4 HOH A 24 824 35 HOH HOH . F 4 HOH A 25 825 38 HOH HOH . F 4 HOH A 26 826 5 HOH HOH . F 4 HOH A 27 827 74 HOH HOH . F 4 HOH A 28 828 30 HOH HOH . F 4 HOH A 29 829 94 HOH HOH . F 4 HOH A 30 830 10 HOH HOH . F 4 HOH A 31 831 50 HOH HOH . F 4 HOH A 32 832 31 HOH HOH . F 4 HOH A 33 833 11 HOH HOH . F 4 HOH A 34 834 20 HOH HOH . F 4 HOH A 35 835 22 HOH HOH . F 4 HOH A 36 836 6 HOH HOH . F 4 HOH A 37 837 3 HOH HOH . F 4 HOH A 38 838 51 HOH HOH . F 4 HOH A 39 839 137 HOH HOH . F 4 HOH A 40 840 120 HOH HOH . F 4 HOH A 41 841 12 HOH HOH . F 4 HOH A 42 842 39 HOH HOH . F 4 HOH A 43 843 57 HOH HOH . F 4 HOH A 44 844 121 HOH HOH . F 4 HOH A 45 845 85 HOH HOH . F 4 HOH A 46 846 56 HOH HOH . F 4 HOH A 47 847 144 HOH HOH . F 4 HOH A 48 848 16 HOH HOH . F 4 HOH A 49 849 91 HOH HOH . F 4 HOH A 50 850 58 HOH HOH . F 4 HOH A 51 851 92 HOH HOH . F 4 HOH A 52 852 106 HOH HOH . G 4 HOH B 1 801 108 HOH HOH . G 4 HOH B 2 802 87 HOH HOH . G 4 HOH B 3 803 128 HOH HOH . G 4 HOH B 4 804 13 HOH HOH . G 4 HOH B 5 805 32 HOH HOH . G 4 HOH B 6 806 117 HOH HOH . G 4 HOH B 7 807 103 HOH HOH . G 4 HOH B 8 808 52 HOH HOH . G 4 HOH B 9 809 26 HOH HOH . G 4 HOH B 10 810 23 HOH HOH . G 4 HOH B 11 811 24 HOH HOH . G 4 HOH B 12 812 105 HOH HOH . G 4 HOH B 13 813 114 HOH HOH . G 4 HOH B 14 814 45 HOH HOH . G 4 HOH B 15 815 44 HOH HOH . G 4 HOH B 16 816 101 HOH HOH . G 4 HOH B 17 817 8 HOH HOH . G 4 HOH B 18 818 72 HOH HOH . G 4 HOH B 19 819 43 HOH HOH . G 4 HOH B 20 820 68 HOH HOH . G 4 HOH B 21 821 130 HOH HOH . G 4 HOH B 22 822 19 HOH HOH . G 4 HOH B 23 823 34 HOH HOH . G 4 HOH B 24 824 53 HOH HOH . G 4 HOH B 25 825 80 HOH HOH . G 4 HOH B 26 826 17 HOH HOH . G 4 HOH B 27 827 107 HOH HOH . G 4 HOH B 28 828 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G6Q . . . C 2 -3.063 52.826 -43.115 1 61.47 ? C1 G6Q 701 A 1 HETATM 2 C C2 G6Q . . . C 2 -2.489 52.456 -44.474 1 56.36 ? C2 G6Q 701 A 1 HETATM 3 C C3 G6Q . . . C 2 -2.337 50.914 -44.584 1 53.37 ? C3 G6Q 701 A 1 HETATM 4 C C4 G6Q . . . C 2 -3.337 50.258 -45.536 1 56.71 ? C4 G6Q 701 A 1 HETATM 5 C C5 G6Q . . . C 2 -2.924 48.839 -45.926 1 53.46 ? C5 G6Q 701 A 1 HETATM 6 C C6 G6Q . . . C 2 -3.955 48.165 -46.804 1 52.34 ? C6 G6Q 701 A 1 HETATM 7 O O1 G6Q . . . C 2 -2.831 53.907 -42.657 1 64.47 ? O1 G6Q 701 A 1 HETATM 8 O O2 G6Q . . . C 2 -3.326 53.033 -45.478 1 60.86 ? O2 G6Q 701 A 1 HETATM 9 O O3 G6Q . . . C 2 -2.437 50.287 -43.31 1 55.3 ? O3 G6Q 701 A 1 HETATM 10 O O4 G6Q . . . C 2 -4.62 50.214 -44.92 1 54.68 ? O4 G6Q 701 A 1 HETATM 11 O O5 G6Q . . . C 2 -1.664 48.887 -46.597 1 53.98 ? O5 G6Q 701 A 1 HETATM 12 O O6 G6Q . . . C 2 -4.06 48.906 -48.037 1 53.29 ? O6 G6Q 701 A 1 HETATM 13 P P G6Q . . . C 2 -5.374 48.739 -48.927 1 56.2 ? P G6Q 701 A 1 HETATM 14 O O1P G6Q . . . C 2 -6.578 49.136 -48.146 1 47.23 ? O1P G6Q 701 A 1 HETATM 15 O O2P G6Q . . . C 2 -5.148 49.574 -50.181 1 53.81 ? O2P G6Q 701 A 1 HETATM 16 O O3P G6Q . . . C 2 -5.397 47.285 -49.356 1 52.47 ? O3P G6Q 701 A 1 HETATM 17 H H1 G6Q . . . C 2 -3.67 52.074 -42.613 1 73.77 ? H1 G6Q 701 A 1 HETATM 18 H H2 G6Q . . . C 2 -1.536 52.955 -44.644 1 67.64 ? H2 G6Q 701 A 1 HETATM 19 H H3 G6Q . . . C 2 -1.318 50.677 -44.889 1 64.04 ? H3 G6Q 701 A 1 HETATM 20 H H4 G6Q . . . C 2 -3.496 50.891 -46.408 1 68.06 ? H4 G6Q 701 A 1 HETATM 21 H H5 G6Q . . . C 2 -2.685 48.238 -45.05 1 64.15 ? H5 G6Q 701 A 1 HETATM 22 H H61 G6Q . . . C 2 -3.677 47.146 -47.073 1 62.81 ? H61 G6Q 701 A 1 HETATM 23 H H62 G6Q . . . C 2 -4.932 48.109 -46.327 1 62.81 ? H62 G6Q 701 A 1 HETATM 24 H HO2 G6Q . . . C 2 -3.542 53.963 -45.205 1 73.04 ? HO2 G6Q 701 A 1 HETATM 25 H HO3 G6Q . . . C 2 -1.711 50.635 -42.729 1 66.37 ? HO3 G6Q 701 A 1 HETATM 26 H HO4 G6Q . . . C 2 -5.215 50.863 -45.381 1 65.62 ? HO4 G6Q 701 A 1 HETATM 27 H HO5 G6Q . . . C 2 -0.952 49.007 -45.915 1 64.78 ? HO5 G6Q 701 A 1 HETATM 28 H HOP2 G6Q . . . C 2 -4.368 50.181 -50.273 1 64.58 ? HOP2 G6Q 701 A 1 HETATM 29 H HOP3 G6Q . . . C 2 -5.047 46.94 -50.218 1 62.98 ? HOP3 G6Q 701 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #