data_6R4H # _model_server_result.job_id VkTRPqRk28cDp41bQ1bqXQ _model_server_result.datetime_utc '2024-11-07 18:43:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r4h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 6R4H # _exptl.entry_id 6R4H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.129 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTAMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R4H _cell.length_a 154.073 _cell.length_b 154.073 _cell.length_c 162.926 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R4H _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 242 A ASP 242 1_555 A N SEP 243 A SEP 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C SEP 243 A SEP 243 1_555 A N THR 244 A THR 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 B C ASP 242 B ASP 242 1_555 B N SEP 243 B SEP 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C SEP 243 B SEP 243 1_555 B N THR 244 B THR 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id GLU _chem_comp.mon_nstd_flag y _chem_comp.name 'GLUTAMIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLU sing 130 n n N H GLU sing 131 n n N H2 GLU sing 132 n n CA C GLU sing 133 n n CA CB GLU sing 134 n n CA HA GLU sing 135 n n C O GLU doub 136 n n C OXT GLU sing 137 n n CB CG GLU sing 138 n n CB HB2 GLU sing 139 n n CB HB3 GLU sing 140 n n CG CD GLU sing 141 n n CG HG2 GLU sing 142 n n CG HG3 GLU sing 143 n n CD OE1 GLU doub 144 n n CD OE2 GLU sing 145 n n OE2 HE2 GLU sing 146 n n OXT HXT GLU sing 147 n n # _atom_sites.entry_id 6R4H _atom_sites.fract_transf_matrix[1][1] 0.00649 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00649 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006138 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G6Q A 1 701 1 G6Q G6Q . D 3 GLU A 1 702 1 GLU GLU . E 2 G6Q B 1 701 2 G6Q G6Q . F 4 HOH A 1 801 119 HOH HOH . F 4 HOH A 2 802 268 HOH HOH . F 4 HOH A 3 803 196 HOH HOH . F 4 HOH A 4 804 9 HOH HOH . F 4 HOH A 5 805 252 HOH HOH . F 4 HOH A 6 806 173 HOH HOH . F 4 HOH A 7 807 139 HOH HOH . F 4 HOH A 8 808 1 HOH HOH . F 4 HOH A 9 809 30 HOH HOH . F 4 HOH A 10 810 3 HOH HOH . F 4 HOH A 11 811 110 HOH HOH . F 4 HOH A 12 812 184 HOH HOH . F 4 HOH A 13 813 29 HOH HOH . F 4 HOH A 14 814 199 HOH HOH . F 4 HOH A 15 815 47 HOH HOH . F 4 HOH A 16 816 20 HOH HOH . F 4 HOH A 17 817 238 HOH HOH . F 4 HOH A 18 818 174 HOH HOH . F 4 HOH A 19 819 8 HOH HOH . F 4 HOH A 20 820 137 HOH HOH . F 4 HOH A 21 821 205 HOH HOH . F 4 HOH A 22 822 65 HOH HOH . F 4 HOH A 23 823 241 HOH HOH . F 4 HOH A 24 824 22 HOH HOH . F 4 HOH A 25 825 11 HOH HOH . F 4 HOH A 26 826 153 HOH HOH . F 4 HOH A 27 827 33 HOH HOH . F 4 HOH A 28 828 249 HOH HOH . F 4 HOH A 29 829 50 HOH HOH . F 4 HOH A 30 830 208 HOH HOH . F 4 HOH A 31 831 28 HOH HOH . F 4 HOH A 32 832 12 HOH HOH . F 4 HOH A 33 833 161 HOH HOH . F 4 HOH A 34 834 176 HOH HOH . F 4 HOH A 35 835 170 HOH HOH . F 4 HOH A 36 836 169 HOH HOH . F 4 HOH A 37 837 200 HOH HOH . F 4 HOH A 38 838 207 HOH HOH . F 4 HOH A 39 839 67 HOH HOH . F 4 HOH A 40 840 244 HOH HOH . F 4 HOH A 41 841 186 HOH HOH . F 4 HOH A 42 842 253 HOH HOH . F 4 HOH A 43 843 220 HOH HOH . F 4 HOH A 44 844 135 HOH HOH . F 4 HOH A 45 845 162 HOH HOH . F 4 HOH A 46 846 23 HOH HOH . F 4 HOH A 47 847 43 HOH HOH . F 4 HOH A 48 848 14 HOH HOH . F 4 HOH A 49 849 44 HOH HOH . F 4 HOH A 50 850 61 HOH HOH . F 4 HOH A 51 851 31 HOH HOH . F 4 HOH A 52 852 5 HOH HOH . F 4 HOH A 53 853 212 HOH HOH . F 4 HOH A 54 854 48 HOH HOH . F 4 HOH A 55 855 13 HOH HOH . F 4 HOH A 56 856 223 HOH HOH . F 4 HOH A 57 857 15 HOH HOH . F 4 HOH A 58 858 188 HOH HOH . F 4 HOH A 59 859 227 HOH HOH . F 4 HOH A 60 860 98 HOH HOH . F 4 HOH A 61 861 266 HOH HOH . F 4 HOH A 62 862 172 HOH HOH . F 4 HOH A 63 863 248 HOH HOH . F 4 HOH A 64 864 203 HOH HOH . F 4 HOH A 65 865 195 HOH HOH . F 4 HOH A 66 866 226 HOH HOH . F 4 HOH A 67 867 211 HOH HOH . F 4 HOH A 68 868 260 HOH HOH . F 4 HOH A 69 869 198 HOH HOH . F 4 HOH A 70 870 210 HOH HOH . F 4 HOH A 71 871 230 HOH HOH . F 4 HOH A 72 872 177 HOH HOH . F 4 HOH A 73 873 217 HOH HOH . F 4 HOH A 74 874 191 HOH HOH . F 4 HOH A 75 875 237 HOH HOH . F 4 HOH A 76 876 134 HOH HOH . F 4 HOH A 77 877 254 HOH HOH . F 4 HOH A 78 878 222 HOH HOH . F 4 HOH A 79 879 259 HOH HOH . F 4 HOH A 80 880 234 HOH HOH . F 4 HOH A 81 881 240 HOH HOH . F 4 HOH A 82 882 251 HOH HOH . F 4 HOH A 83 883 257 HOH HOH . G 4 HOH B 1 801 181 HOH HOH . G 4 HOH B 2 802 265 HOH HOH . G 4 HOH B 3 803 182 HOH HOH . G 4 HOH B 4 804 262 HOH HOH . G 4 HOH B 5 805 120 HOH HOH . G 4 HOH B 6 806 255 HOH HOH . G 4 HOH B 7 807 183 HOH HOH . G 4 HOH B 8 808 118 HOH HOH . G 4 HOH B 9 809 204 HOH HOH . G 4 HOH B 10 810 219 HOH HOH . G 4 HOH B 11 811 218 HOH HOH . G 4 HOH B 12 812 224 HOH HOH . G 4 HOH B 13 813 235 HOH HOH . G 4 HOH B 14 814 206 HOH HOH . G 4 HOH B 15 815 117 HOH HOH . G 4 HOH B 16 816 16 HOH HOH . G 4 HOH B 17 817 2 HOH HOH . G 4 HOH B 18 818 185 HOH HOH . G 4 HOH B 19 819 221 HOH HOH . G 4 HOH B 20 820 229 HOH HOH . G 4 HOH B 21 821 256 HOH HOH . G 4 HOH B 22 822 42 HOH HOH . G 4 HOH B 23 823 18 HOH HOH . G 4 HOH B 24 824 246 HOH HOH . G 4 HOH B 25 825 171 HOH HOH . G 4 HOH B 26 826 201 HOH HOH . G 4 HOH B 27 827 175 HOH HOH . G 4 HOH B 28 828 55 HOH HOH . G 4 HOH B 29 829 40 HOH HOH . G 4 HOH B 30 830 269 HOH HOH . G 4 HOH B 31 831 180 HOH HOH . G 4 HOH B 32 832 189 HOH HOH . G 4 HOH B 33 833 7 HOH HOH . G 4 HOH B 34 834 32 HOH HOH . G 4 HOH B 35 835 213 HOH HOH . G 4 HOH B 36 836 190 HOH HOH . G 4 HOH B 37 837 27 HOH HOH . G 4 HOH B 38 838 17 HOH HOH . G 4 HOH B 39 839 197 HOH HOH . G 4 HOH B 40 840 52 HOH HOH . G 4 HOH B 41 841 192 HOH HOH . G 4 HOH B 42 842 179 HOH HOH . G 4 HOH B 43 843 10 HOH HOH . G 4 HOH B 44 844 232 HOH HOH . G 4 HOH B 45 845 216 HOH HOH . G 4 HOH B 46 846 193 HOH HOH . G 4 HOH B 47 847 202 HOH HOH . G 4 HOH B 48 848 242 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLU . . . D 3 47.09 -12.372 -21.211 1 58.17 ? N GLU 702 A 1 HETATM 2 C CA GLU . . . D 3 48.296 -12.447 -22.029 1 62.01 ? CA GLU 702 A 1 HETATM 3 C C GLU . . . D 3 49.183 -13.621 -21.62 1 61.18 ? C GLU 702 A 1 HETATM 4 O O GLU . . . D 3 49.983 -14.114 -22.415 1 61.48 ? O GLU 702 A 1 HETATM 5 C CB GLU . . . D 3 49.089 -11.14 -21.935 1 56.74 ? CB GLU 702 A 1 HETATM 6 C CG GLU . . . D 3 49.485 -10.739 -20.514 1 58.85 ? CG GLU 702 A 1 HETATM 7 C CD GLU . . . D 3 50.271 -9.436 -20.466 1 57.59 ? CD GLU 702 A 1 HETATM 8 O OE1 GLU . . . D 3 49.64 -8.358 -20.501 1 52.34 ? OE1 GLU 702 A 1 HETATM 9 O OE2 GLU . . . D 3 51.518 -9.488 -20.402 1 58.26 ? OE2 GLU 702 A 1 HETATM 10 O OXT GLU . . . D 3 49.129 -14.101 -20.487 1 68.44 ? OXT GLU 702 A 1 HETATM 11 H HA GLU . . . D 3 48.041 -12.576 -22.956 1 74.43 ? HA GLU 702 A 1 HETATM 12 H HB2 GLU . . . D 3 49.905 -11.234 -22.452 1 68.11 ? HB2 GLU 702 A 1 HETATM 13 H HB3 GLU . . . D 3 48.55 -10.423 -22.303 1 68.11 ? HB3 GLU 702 A 1 HETATM 14 H HG2 GLU . . . D 3 48.682 -10.625 -19.982 1 70.64 ? HG2 GLU 702 A 1 HETATM 15 H HG3 GLU . . . D 3 50.039 -11.437 -20.131 1 70.64 ? HG3 GLU 702 A 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #