data_6R59 # _model_server_result.job_id Htqxl0NYruYLdMnZE_0QHQ _model_server_result.datetime_utc '2024-11-13 04:58:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r59 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6R59 # _exptl.entry_id 6R59 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.6 _cell.angle_gamma 90 _cell.entry_id 6R59 _cell.length_a 37.11 _cell.length_b 42.95 _cell.length_c 122.24 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R59 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ACE 1 E ACE 118 1_555 C N GLU 2 E GLU 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 C C VAL 7 E VAL 124 1_555 C N LPD 8 E LPD 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 D C ACE 1 C ACE 118 1_555 D N GLU 2 C GLU 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale4 D C VAL 7 C VAL 124 1_555 D N LPD 8 C LPD 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? metalc ? metalc1 A NE2 HIS 119 A HIS 142 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc2 A NE2 HIS 123 A HIS 146 1_555 E ZN ZN . A ZN 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc3 A OE1 GLU 162 A GLU 185 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc4 E ZN ZN . A ZN 301 1_555 C O PRO 5 E PRO 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc5 B NE2 HIS 119 B HIS 142 1_555 F ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc6 B NE2 HIS 123 B HIS 146 1_555 F ZN ZN . B ZN 301 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc7 B OE1 GLU 162 B GLU 185 1_555 F ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc8 F ZN ZN . B ZN 301 1_555 D O PRO 5 C PRO 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6R59 _atom_sites.fract_transf_matrix[1][1] 0.026947 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003119 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023283 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008235 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 301 1 ZN ZN . F 3 ZN B 1 301 2 ZN ZN . G 4 HOH A 1 401 168 HOH HOH . G 4 HOH A 2 402 99 HOH HOH . G 4 HOH A 3 403 197 HOH HOH . G 4 HOH A 4 404 214 HOH HOH . G 4 HOH A 5 405 84 HOH HOH . G 4 HOH A 6 406 130 HOH HOH . G 4 HOH A 7 407 70 HOH HOH . G 4 HOH A 8 408 114 HOH HOH . G 4 HOH A 9 409 218 HOH HOH . G 4 HOH A 10 410 5 HOH HOH . G 4 HOH A 11 411 102 HOH HOH . G 4 HOH A 12 412 204 HOH HOH . G 4 HOH A 13 413 48 HOH HOH . G 4 HOH A 14 414 154 HOH HOH . G 4 HOH A 15 415 138 HOH HOH . G 4 HOH A 16 416 36 HOH HOH . G 4 HOH A 17 417 98 HOH HOH . G 4 HOH A 18 418 194 HOH HOH . G 4 HOH A 19 419 91 HOH HOH . G 4 HOH A 20 420 1 HOH HOH . G 4 HOH A 21 421 189 HOH HOH . G 4 HOH A 22 422 111 HOH HOH . G 4 HOH A 23 423 21 HOH HOH . G 4 HOH A 24 424 136 HOH HOH . G 4 HOH A 25 425 79 HOH HOH . G 4 HOH A 26 426 116 HOH HOH . G 4 HOH A 27 427 27 HOH HOH . G 4 HOH A 28 428 257 HOH HOH . G 4 HOH A 29 429 186 HOH HOH . G 4 HOH A 30 430 244 HOH HOH . G 4 HOH A 31 431 137 HOH HOH . G 4 HOH A 32 432 82 HOH HOH . G 4 HOH A 33 433 45 HOH HOH . G 4 HOH A 34 434 25 HOH HOH . G 4 HOH A 35 435 77 HOH HOH . G 4 HOH A 36 436 165 HOH HOH . G 4 HOH A 37 437 156 HOH HOH . G 4 HOH A 38 438 211 HOH HOH . G 4 HOH A 39 439 44 HOH HOH . G 4 HOH A 40 440 20 HOH HOH . G 4 HOH A 41 441 225 HOH HOH . G 4 HOH A 42 442 76 HOH HOH . G 4 HOH A 43 443 212 HOH HOH . G 4 HOH A 44 444 54 HOH HOH . G 4 HOH A 45 445 223 HOH HOH . G 4 HOH A 46 446 17 HOH HOH . G 4 HOH A 47 447 145 HOH HOH . G 4 HOH A 48 448 18 HOH HOH . G 4 HOH A 49 449 226 HOH HOH . G 4 HOH A 50 450 56 HOH HOH . G 4 HOH A 51 451 61 HOH HOH . G 4 HOH A 52 452 24 HOH HOH . G 4 HOH A 53 453 90 HOH HOH . G 4 HOH A 54 454 41 HOH HOH . G 4 HOH A 55 455 134 HOH HOH . G 4 HOH A 56 456 63 HOH HOH . G 4 HOH A 57 457 19 HOH HOH . G 4 HOH A 58 458 248 HOH HOH . G 4 HOH A 59 459 58 HOH HOH . G 4 HOH A 60 460 117 HOH HOH . G 4 HOH A 61 461 68 HOH HOH . G 4 HOH A 62 462 74 HOH HOH . G 4 HOH A 63 463 236 HOH HOH . G 4 HOH A 64 464 66 HOH HOH . G 4 HOH A 65 465 160 HOH HOH . G 4 HOH A 66 466 149 HOH HOH . G 4 HOH A 67 467 262 HOH HOH . G 4 HOH A 68 468 42 HOH HOH . G 4 HOH A 69 469 112 HOH HOH . G 4 HOH A 70 470 75 HOH HOH . G 4 HOH A 71 471 110 HOH HOH . G 4 HOH A 72 472 243 HOH HOH . G 4 HOH A 73 473 35 HOH HOH . G 4 HOH A 74 474 8 HOH HOH . G 4 HOH A 75 475 57 HOH HOH . G 4 HOH A 76 476 94 HOH HOH . G 4 HOH A 77 477 62 HOH HOH . G 4 HOH A 78 478 22 HOH HOH . G 4 HOH A 79 479 49 HOH HOH . G 4 HOH A 80 480 219 HOH HOH . G 4 HOH A 81 481 15 HOH HOH . G 4 HOH A 82 482 183 HOH HOH . G 4 HOH A 83 483 81 HOH HOH . G 4 HOH A 84 484 213 HOH HOH . G 4 HOH A 85 485 132 HOH HOH . G 4 HOH A 86 486 33 HOH HOH . G 4 HOH A 87 487 198 HOH HOH . G 4 HOH A 88 488 40 HOH HOH . G 4 HOH A 89 489 199 HOH HOH . G 4 HOH A 90 490 126 HOH HOH . G 4 HOH A 91 491 233 HOH HOH . G 4 HOH A 92 492 113 HOH HOH . G 4 HOH A 93 493 249 HOH HOH . G 4 HOH A 94 494 109 HOH HOH . G 4 HOH A 95 495 230 HOH HOH . G 4 HOH A 96 496 10 HOH HOH . G 4 HOH A 97 497 256 HOH HOH . G 4 HOH A 98 498 196 HOH HOH . G 4 HOH A 99 499 235 HOH HOH . G 4 HOH A 100 500 242 HOH HOH . G 4 HOH A 101 501 240 HOH HOH . G 4 HOH A 102 502 241 HOH HOH . G 4 HOH A 103 503 227 HOH HOH . G 4 HOH A 104 504 86 HOH HOH . G 4 HOH A 105 505 178 HOH HOH . G 4 HOH A 106 506 192 HOH HOH . G 4 HOH A 107 507 179 HOH HOH . G 4 HOH A 108 508 146 HOH HOH . G 4 HOH A 109 509 245 HOH HOH . G 4 HOH A 110 510 4 HOH HOH . G 4 HOH A 111 511 47 HOH HOH . G 4 HOH A 112 512 268 HOH HOH . G 4 HOH A 113 513 261 HOH HOH . G 4 HOH A 114 514 231 HOH HOH . G 4 HOH A 115 515 184 HOH HOH . G 4 HOH A 116 516 107 HOH HOH . G 4 HOH A 117 517 163 HOH HOH . G 4 HOH A 118 518 157 HOH HOH . G 4 HOH A 119 519 150 HOH HOH . G 4 HOH A 120 520 205 HOH HOH . G 4 HOH A 121 521 181 HOH HOH . G 4 HOH A 122 522 171 HOH HOH . G 4 HOH A 123 523 267 HOH HOH . G 4 HOH A 124 524 228 HOH HOH . G 4 HOH A 125 525 203 HOH HOH . G 4 HOH A 126 526 188 HOH HOH . G 4 HOH A 127 527 190 HOH HOH . G 4 HOH A 128 528 158 HOH HOH . G 4 HOH A 129 529 208 HOH HOH . G 4 HOH A 130 530 55 HOH HOH . G 4 HOH A 131 531 258 HOH HOH . G 4 HOH A 132 532 191 HOH HOH . G 4 HOH A 133 533 153 HOH HOH . G 4 HOH A 134 534 254 HOH HOH . G 4 HOH A 135 535 237 HOH HOH . G 4 HOH A 136 536 104 HOH HOH . G 4 HOH A 137 537 239 HOH HOH . G 4 HOH A 138 538 216 HOH HOH . G 4 HOH A 139 539 201 HOH HOH . G 4 HOH A 140 540 152 HOH HOH . G 4 HOH A 141 541 266 HOH HOH . H 4 HOH B 1 401 195 HOH HOH . H 4 HOH B 2 402 159 HOH HOH . H 4 HOH B 3 403 92 HOH HOH . H 4 HOH B 4 404 30 HOH HOH . H 4 HOH B 5 405 247 HOH HOH . H 4 HOH B 6 406 85 HOH HOH . H 4 HOH B 7 407 139 HOH HOH . H 4 HOH B 8 408 169 HOH HOH . H 4 HOH B 9 409 93 HOH HOH . H 4 HOH B 10 410 60 HOH HOH . H 4 HOH B 11 411 32 HOH HOH . H 4 HOH B 12 412 119 HOH HOH . H 4 HOH B 13 413 9 HOH HOH . H 4 HOH B 14 414 11 HOH HOH . H 4 HOH B 15 415 193 HOH HOH . H 4 HOH B 16 416 23 HOH HOH . H 4 HOH B 17 417 96 HOH HOH . H 4 HOH B 18 418 174 HOH HOH . H 4 HOH B 19 419 65 HOH HOH . H 4 HOH B 20 420 87 HOH HOH . H 4 HOH B 21 421 217 HOH HOH . H 4 HOH B 22 422 38 HOH HOH . H 4 HOH B 23 423 105 HOH HOH . H 4 HOH B 24 424 202 HOH HOH . H 4 HOH B 25 425 251 HOH HOH . H 4 HOH B 26 426 234 HOH HOH . H 4 HOH B 27 427 28 HOH HOH . H 4 HOH B 28 428 59 HOH HOH . H 4 HOH B 29 429 13 HOH HOH . H 4 HOH B 30 430 206 HOH HOH . H 4 HOH B 31 431 2 HOH HOH . H 4 HOH B 32 432 7 HOH HOH . H 4 HOH B 33 433 26 HOH HOH . H 4 HOH B 34 434 52 HOH HOH . H 4 HOH B 35 435 69 HOH HOH . H 4 HOH B 36 436 51 HOH HOH . H 4 HOH B 37 437 167 HOH HOH . H 4 HOH B 38 438 39 HOH HOH . H 4 HOH B 39 439 260 HOH HOH . H 4 HOH B 40 440 215 HOH HOH . H 4 HOH B 41 441 3 HOH HOH . H 4 HOH B 42 442 64 HOH HOH . H 4 HOH B 43 443 71 HOH HOH . H 4 HOH B 44 444 67 HOH HOH . H 4 HOH B 45 445 101 HOH HOH . H 4 HOH B 46 446 125 HOH HOH . H 4 HOH B 47 447 131 HOH HOH . H 4 HOH B 48 448 37 HOH HOH . H 4 HOH B 49 449 144 HOH HOH . H 4 HOH B 50 450 72 HOH HOH . H 4 HOH B 51 451 162 HOH HOH . H 4 HOH B 52 452 80 HOH HOH . H 4 HOH B 53 453 97 HOH HOH . H 4 HOH B 54 454 123 HOH HOH . H 4 HOH B 55 455 120 HOH HOH . H 4 HOH B 56 456 147 HOH HOH . H 4 HOH B 57 457 155 HOH HOH . H 4 HOH B 58 458 6 HOH HOH . H 4 HOH B 59 459 78 HOH HOH . H 4 HOH B 60 460 161 HOH HOH . H 4 HOH B 61 461 31 HOH HOH . H 4 HOH B 62 462 222 HOH HOH . H 4 HOH B 63 463 177 HOH HOH . H 4 HOH B 64 464 108 HOH HOH . H 4 HOH B 65 465 221 HOH HOH . H 4 HOH B 66 466 140 HOH HOH . H 4 HOH B 67 467 232 HOH HOH . H 4 HOH B 68 468 124 HOH HOH . H 4 HOH B 69 469 166 HOH HOH . H 4 HOH B 70 470 46 HOH HOH . H 4 HOH B 71 471 53 HOH HOH . H 4 HOH B 72 472 246 HOH HOH . H 4 HOH B 73 473 185 HOH HOH . H 4 HOH B 74 474 121 HOH HOH . H 4 HOH B 75 475 224 HOH HOH . H 4 HOH B 76 476 173 HOH HOH . H 4 HOH B 77 477 29 HOH HOH . H 4 HOH B 78 478 12 HOH HOH . H 4 HOH B 79 479 95 HOH HOH . H 4 HOH B 80 480 122 HOH HOH . H 4 HOH B 81 481 253 HOH HOH . H 4 HOH B 82 482 264 HOH HOH . H 4 HOH B 83 483 16 HOH HOH . H 4 HOH B 84 484 170 HOH HOH . H 4 HOH B 85 485 103 HOH HOH . H 4 HOH B 86 486 129 HOH HOH . H 4 HOH B 87 487 14 HOH HOH . H 4 HOH B 88 488 135 HOH HOH . H 4 HOH B 89 489 207 HOH HOH . H 4 HOH B 90 490 200 HOH HOH . H 4 HOH B 91 491 252 HOH HOH . H 4 HOH B 92 492 187 HOH HOH . H 4 HOH B 93 493 100 HOH HOH . H 4 HOH B 94 494 176 HOH HOH . H 4 HOH B 95 495 210 HOH HOH . H 4 HOH B 96 496 143 HOH HOH . H 4 HOH B 97 497 229 HOH HOH . H 4 HOH B 98 498 175 HOH HOH . H 4 HOH B 99 499 209 HOH HOH . H 4 HOH B 100 500 238 HOH HOH . H 4 HOH B 101 501 89 HOH HOH . H 4 HOH B 102 502 151 HOH HOH . H 4 HOH B 103 503 142 HOH HOH . H 4 HOH B 104 504 255 HOH HOH . H 4 HOH B 105 505 172 HOH HOH . H 4 HOH B 106 506 128 HOH HOH . H 4 HOH B 107 507 164 HOH HOH . H 4 HOH B 108 508 259 HOH HOH . H 4 HOH B 109 509 148 HOH HOH . H 4 HOH B 110 510 83 HOH HOH . H 4 HOH B 111 511 127 HOH HOH . H 4 HOH B 112 512 220 HOH HOH . H 4 HOH B 113 513 265 HOH HOH . H 4 HOH B 114 514 115 HOH HOH . H 4 HOH B 115 515 180 HOH HOH . H 4 HOH B 116 516 88 HOH HOH . H 4 HOH B 117 517 133 HOH HOH . H 4 HOH B 118 518 73 HOH HOH . H 4 HOH B 119 519 250 HOH HOH . I 4 HOH E 1 201 141 HOH HOH . I 4 HOH E 2 202 50 HOH HOH . I 4 HOH E 3 203 43 HOH HOH . I 4 HOH E 4 204 263 HOH HOH . J 4 HOH C 1 201 106 HOH HOH . J 4 HOH C 2 202 182 HOH HOH . J 4 HOH C 3 203 118 HOH HOH . J 4 HOH C 4 204 34 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 14.561 _atom_site.Cartn_y 8.775 _atom_site.Cartn_z 40.317 _atom_site.occupancy 0.17 _atom_site.B_iso_or_equiv 16.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #