data_6R6X # _model_server_result.job_id PttA1j_120A5hhnRbtKguw _model_server_result.datetime_utc '2025-08-31 04:08:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r6x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 6R6X # _exptl.entry_id 6R6X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 224.261 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(1-methylindol-3-yl)pyrimidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6R6X _cell.length_a 68.24 _cell.length_b 68.24 _cell.length_c 283.54 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R6X _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H12 N4' _chem_comp.formula_weight 224.261 _chem_comp.id JU8 _chem_comp.mon_nstd_flag . _chem_comp.name 5-(1-methylindol-3-yl)pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAB CAA JU8 doub 173 n y CAB CAC JU8 sing 174 n y CAA CAF JU8 sing 175 n y N1 C6 JU8 doub 176 n y N1 C2 JU8 sing 177 n y C6 C5 JU8 sing 178 n y CAC CAD JU8 doub 179 n y C2 N3 JU8 doub 180 n y CAF CAI JU8 sing 181 n y CAF CAE JU8 doub 182 n y C5 CAI JU8 sing 183 n n C5 C4 JU8 doub 184 n y CAD CAE JU8 sing 185 n y CAI CAH JU8 doub 186 n y CAE NAG JU8 sing 187 n y N3 C4 JU8 sing 188 n y C4 NAQ JU8 sing 189 n n CAH NAG JU8 sing 190 n y NAG CAP JU8 sing 191 n n C6 H1 JU8 sing 192 n n CAP H2 JU8 sing 193 n n CAP H3 JU8 sing 194 n n CAP H4 JU8 sing 195 n n CAH H5 JU8 sing 196 n n CAD H6 JU8 sing 197 n n CAC H7 JU8 sing 198 n n CAB H8 JU8 sing 199 n n CAA H9 JU8 sing 200 n n C2 H10 JU8 sing 201 n n NAQ H11 JU8 sing 202 n n NAQ H12 JU8 sing 203 n n # _atom_sites.entry_id 6R6X _atom_sites.fract_transf_matrix[1][1] 0.014654 _atom_sites.fract_transf_matrix[1][2] 0.008461 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016921 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JU8 A 1 901 901 JU8 DRG . C 3 HOH A 1 1001 85 HOH HOH . C 3 HOH A 2 1002 96 HOH HOH . C 3 HOH A 3 1003 67 HOH HOH . C 3 HOH A 4 1004 107 HOH HOH . C 3 HOH A 5 1005 36 HOH HOH . C 3 HOH A 6 1006 111 HOH HOH . C 3 HOH A 7 1007 59 HOH HOH . C 3 HOH A 8 1008 76 HOH HOH . C 3 HOH A 9 1009 33 HOH HOH . C 3 HOH A 10 1010 56 HOH HOH . C 3 HOH A 11 1011 48 HOH HOH . C 3 HOH A 12 1012 73 HOH HOH . C 3 HOH A 13 1013 12 HOH HOH . C 3 HOH A 14 1014 127 HOH HOH . C 3 HOH A 15 1015 98 HOH HOH . C 3 HOH A 16 1016 21 HOH HOH . C 3 HOH A 17 1017 28 HOH HOH . C 3 HOH A 18 1018 38 HOH HOH . C 3 HOH A 19 1019 45 HOH HOH . C 3 HOH A 20 1020 40 HOH HOH . C 3 HOH A 21 1021 71 HOH HOH . C 3 HOH A 22 1022 3 HOH HOH . C 3 HOH A 23 1023 81 HOH HOH . C 3 HOH A 24 1024 123 HOH HOH . C 3 HOH A 25 1025 61 HOH HOH . C 3 HOH A 26 1026 17 HOH HOH . C 3 HOH A 27 1027 46 HOH HOH . C 3 HOH A 28 1028 35 HOH HOH . C 3 HOH A 29 1029 32 HOH HOH . C 3 HOH A 30 1030 68 HOH HOH . C 3 HOH A 31 1031 14 HOH HOH . C 3 HOH A 32 1032 10 HOH HOH . C 3 HOH A 33 1033 22 HOH HOH . C 3 HOH A 34 1034 49 HOH HOH . C 3 HOH A 35 1035 31 HOH HOH . C 3 HOH A 36 1036 18 HOH HOH . C 3 HOH A 37 1037 34 HOH HOH . C 3 HOH A 38 1038 30 HOH HOH . C 3 HOH A 39 1039 130 HOH HOH . C 3 HOH A 40 1040 94 HOH HOH . C 3 HOH A 41 1041 118 HOH HOH . C 3 HOH A 42 1042 105 HOH HOH . C 3 HOH A 43 1043 5 HOH HOH . C 3 HOH A 44 1044 11 HOH HOH . C 3 HOH A 45 1045 50 HOH HOH . C 3 HOH A 46 1046 117 HOH HOH . C 3 HOH A 47 1047 41 HOH HOH . C 3 HOH A 48 1048 86 HOH HOH . C 3 HOH A 49 1049 65 HOH HOH . C 3 HOH A 50 1050 102 HOH HOH . C 3 HOH A 51 1051 60 HOH HOH . C 3 HOH A 52 1052 19 HOH HOH . C 3 HOH A 53 1053 82 HOH HOH . C 3 HOH A 54 1054 106 HOH HOH . C 3 HOH A 55 1055 7 HOH HOH . C 3 HOH A 56 1056 39 HOH HOH . C 3 HOH A 57 1057 37 HOH HOH . C 3 HOH A 58 1058 15 HOH HOH . C 3 HOH A 59 1059 4 HOH HOH . C 3 HOH A 60 1060 16 HOH HOH . C 3 HOH A 61 1061 108 HOH HOH . C 3 HOH A 62 1062 72 HOH HOH . C 3 HOH A 63 1063 44 HOH HOH . C 3 HOH A 64 1064 83 HOH HOH . C 3 HOH A 65 1065 54 HOH HOH . C 3 HOH A 66 1066 77 HOH HOH . C 3 HOH A 67 1067 88 HOH HOH . C 3 HOH A 68 1068 24 HOH HOH . C 3 HOH A 69 1069 78 HOH HOH . C 3 HOH A 70 1070 13 HOH HOH . C 3 HOH A 71 1071 97 HOH HOH . C 3 HOH A 72 1072 2 HOH HOH . C 3 HOH A 73 1073 95 HOH HOH . C 3 HOH A 74 1074 52 HOH HOH . C 3 HOH A 75 1075 8 HOH HOH . C 3 HOH A 76 1076 53 HOH HOH . C 3 HOH A 77 1077 6 HOH HOH . C 3 HOH A 78 1078 57 HOH HOH . C 3 HOH A 79 1079 55 HOH HOH . C 3 HOH A 80 1080 51 HOH HOH . C 3 HOH A 81 1081 121 HOH HOH . C 3 HOH A 82 1082 109 HOH HOH . C 3 HOH A 83 1083 104 HOH HOH . C 3 HOH A 84 1084 29 HOH HOH . C 3 HOH A 85 1085 20 HOH HOH . C 3 HOH A 86 1086 1 HOH HOH . C 3 HOH A 87 1087 113 HOH HOH . C 3 HOH A 88 1088 74 HOH HOH . C 3 HOH A 89 1089 43 HOH HOH . C 3 HOH A 90 1090 58 HOH HOH . C 3 HOH A 91 1091 9 HOH HOH . C 3 HOH A 92 1092 25 HOH HOH . C 3 HOH A 93 1093 119 HOH HOH . C 3 HOH A 94 1094 79 HOH HOH . C 3 HOH A 95 1095 63 HOH HOH . C 3 HOH A 96 1096 27 HOH HOH . C 3 HOH A 97 1097 84 HOH HOH . C 3 HOH A 98 1098 80 HOH HOH . C 3 HOH A 99 1099 101 HOH HOH . C 3 HOH A 100 1100 42 HOH HOH . C 3 HOH A 101 1101 92 HOH HOH . C 3 HOH A 102 1102 26 HOH HOH . C 3 HOH A 103 1103 120 HOH HOH . C 3 HOH A 104 1104 122 HOH HOH . C 3 HOH A 105 1105 93 HOH HOH . C 3 HOH A 106 1106 69 HOH HOH . C 3 HOH A 107 1107 62 HOH HOH . C 3 HOH A 108 1108 23 HOH HOH . C 3 HOH A 109 1109 128 HOH HOH . C 3 HOH A 110 1110 90 HOH HOH . C 3 HOH A 111 1111 75 HOH HOH . C 3 HOH A 112 1112 110 HOH HOH . C 3 HOH A 113 1113 66 HOH HOH . C 3 HOH A 114 1114 125 HOH HOH . C 3 HOH A 115 1115 87 HOH HOH . C 3 HOH A 116 1116 64 HOH HOH . C 3 HOH A 117 1117 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 JU8 . . . B 2 22.215 -18.993 4.639 1 71.75 ? C4 JU8 901 A 1 HETATM 2 C C5 JU8 . . . B 2 20.982 -19.024 3.885 1 64.2 ? C5 JU8 901 A 1 HETATM 3 C C6 JU8 . . . B 2 20.988 -19.994 2.842 1 75.22 ? C6 JU8 901 A 1 HETATM 4 N N1 JU8 . . . B 2 22.107 -20.862 2.564 1 59.7 ? N1 JU8 901 A 1 HETATM 5 N N3 JU8 . . . B 2 23.274 -19.817 4.382 1 68.15 ? N3 JU8 901 A 1 HETATM 6 C CAP JU8 . . . B 2 18.5 -15.536 6.111 1 62.95 ? CAP JU8 901 A 1 HETATM 7 N NAG JU8 . . . B 2 18.768 -16.607 5.141 1 62.7 ? NAG JU8 901 A 1 HETATM 8 C CAH JU8 . . . B 2 19.926 -17.26 5.126 1 56.49 ? CAH JU8 901 A 1 HETATM 9 C CAE JU8 . . . B 2 17.962 -17.082 4.183 1 55.99 ? CAE JU8 901 A 1 HETATM 10 C CAD JU8 . . . B 2 16.699 -16.684 3.886 1 55.31 ? CAD JU8 901 A 1 HETATM 11 C CAC JU8 . . . B 2 16.035 -17.308 2.845 1 58.21 ? CAC JU8 901 A 1 HETATM 12 C CAB JU8 . . . B 2 16.711 -18.318 2.163 1 55.33 ? CAB JU8 901 A 1 HETATM 13 C CAA JU8 . . . B 2 18.026 -18.699 2.516 1 55.54 ? CAA JU8 901 A 1 HETATM 14 C CAF JU8 . . . B 2 18.656 -18.082 3.534 1 55.07 ? CAF JU8 901 A 1 HETATM 15 C CAI JU8 . . . B 2 19.899 -18.19 4.139 1 55.76 ? CAI JU8 901 A 1 HETATM 16 C C2 JU8 . . . B 2 23.265 -20.773 3.34 1 67.18 ? C2 JU8 901 A 1 HETATM 17 N NAQ JU8 . . . B 2 22.356 -18.108 5.652 1 81.16 ? NAQ JU8 901 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #