data_6R78 # _model_server_result.job_id 84LGtMeC1nS17tRnLVIXgA _model_server_result.datetime_utc '2024-11-07 12:47:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r78 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":408}' # _entry.id 6R78 # _exptl.entry_id 6R78 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.67 _cell.angle_gamma 90 _cell.entry_id 6R78 _cell.length_a 60.79 _cell.length_b 73.12 _cell.length_c 64.21 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R78 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,U 1 1 B,N,O,P,Q,R,S,T,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 S N N ? 5 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 39 A THR 42 1_555 K NA NA . A NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.101 ? metalc ? metalc2 A OG1 THR 39 A THR 42 1_555 K NA NA . A NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc3 A OD1 ASP 40 A ASP 43 1_555 K NA NA . A NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc4 A OE2 GLU 66 A GLU 69 1_555 K NA NA . A NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.861 ? metalc ? metalc5 A NE2 HIS 74 A HIS 77 1_555 I ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc6 A ND1 HIS 76 A HIS 79 1_555 I ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc7 A OD2 ASP 78 A ASP 81 1_555 J ZN ZN . A ZN 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc8 A NE2 HIS 136 A HIS 139 1_555 I ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc9 A SG CYS 155 A CYS 158 1_555 J ZN ZN . A ZN 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc10 A NE2 HIS 194 A HIS 197 1_555 J ZN ZN . A ZN 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc11 I ZN ZN . A ZN 407 1_555 U O HOH . A HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc12 J ZN ZN . A ZN 408 1_555 U O HOH . A HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc13 B NE2 HIS 74 B HIS 77 1_555 T ZN ZN . B ZN 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc14 B ND1 HIS 76 B HIS 79 1_555 T ZN ZN . B ZN 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc15 B OD2 ASP 78 B ASP 81 1_555 S ZN ZN . B ZN 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc16 B NE2 HIS 136 B HIS 139 1_555 T ZN ZN . B ZN 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc17 B SG CYS 155 B CYS 158 1_555 S ZN ZN . B ZN 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc18 B NE2 HIS 194 B HIS 197 1_555 S ZN ZN . B ZN 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc19 S ZN ZN . B ZN 306 1_555 V O HOH . B HOH 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? metalc ? metalc20 T ZN ZN . B ZN 307 1_555 V O HOH . B HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc21 T ZN ZN . B ZN 307 1_555 V O HOH . B HOH 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6R78 _atom_sites.fract_transf_matrix[1][1] 0.01645 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006871 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013676 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 401 401 GOL GOL . D 3 PEG A 1 402 501 PEG PEG . E 2 GOL A 1 403 601 GOL GOL . F 2 GOL A 1 404 1001 GOL GOL . G 2 GOL A 1 405 1101 GOL GOL . H 4 BME A 1 406 1201 BME BME . I 5 ZN A 1 407 3 ZN ZN . J 5 ZN A 1 408 4 ZN ZN . K 6 NA A 1 409 1 NA NA . L 7 EDO A 1 410 1 EDO EDO . M 2 GOL A 1 411 1 GOL GOL . N 2 GOL B 1 301 301 GOL GOL . O 2 GOL B 1 302 401 GOL GOL . P 2 GOL B 1 303 501 GOL GOL . Q 2 GOL B 1 304 701 GOL GOL . R 4 BME B 1 305 801 BME BME . S 5 ZN B 1 306 1 ZN ZN . T 5 ZN B 1 307 2 ZN ZN . U 8 HOH A 1 501 233 HOH HOH . U 8 HOH A 2 502 239 HOH HOH . U 8 HOH A 3 503 79 HOH HOH . U 8 HOH A 4 504 324 HOH HOH . U 8 HOH A 5 505 206 HOH HOH . U 8 HOH A 6 506 366 HOH HOH . U 8 HOH A 7 507 257 HOH HOH . U 8 HOH A 8 508 232 HOH HOH . U 8 HOH A 9 509 225 HOH HOH . U 8 HOH A 10 510 160 HOH HOH . U 8 HOH A 11 511 363 HOH HOH . U 8 HOH A 12 512 335 HOH HOH . U 8 HOH A 13 513 286 HOH HOH . U 8 HOH A 14 514 362 HOH HOH . U 8 HOH A 15 515 101 HOH HOH . U 8 HOH A 16 516 195 HOH HOH . U 8 HOH A 17 517 194 HOH HOH . U 8 HOH A 18 518 343 HOH HOH . U 8 HOH A 19 519 342 HOH HOH . U 8 HOH A 20 520 64 HOH HOH . U 8 HOH A 21 521 272 HOH HOH . U 8 HOH A 22 522 189 HOH HOH . U 8 HOH A 23 523 332 HOH HOH . U 8 HOH A 24 524 161 HOH HOH . U 8 HOH A 25 525 163 HOH HOH . U 8 HOH A 26 526 36 HOH HOH . U 8 HOH A 27 527 340 HOH HOH . U 8 HOH A 28 528 319 HOH HOH . U 8 HOH A 29 529 330 HOH HOH . U 8 HOH A 30 530 68 HOH HOH . U 8 HOH A 31 531 35 HOH HOH . U 8 HOH A 32 532 149 HOH HOH . U 8 HOH A 33 533 325 HOH HOH . U 8 HOH A 34 534 192 HOH HOH . U 8 HOH A 35 535 158 HOH HOH . U 8 HOH A 36 536 339 HOH HOH . U 8 HOH A 37 537 359 HOH HOH . U 8 HOH A 38 538 288 HOH HOH . U 8 HOH A 39 539 334 HOH HOH . U 8 HOH A 40 540 12 HOH HOH . U 8 HOH A 41 541 14 HOH HOH . U 8 HOH A 42 542 21 HOH HOH . U 8 HOH A 43 543 365 HOH HOH . U 8 HOH A 44 544 260 HOH HOH . U 8 HOH A 45 545 151 HOH HOH . U 8 HOH A 46 546 356 HOH HOH . U 8 HOH A 47 547 352 HOH HOH . U 8 HOH A 48 548 333 HOH HOH . U 8 HOH A 49 549 354 HOH HOH . U 8 HOH A 50 550 59 HOH HOH . U 8 HOH A 51 551 10 HOH HOH . U 8 HOH A 52 552 360 HOH HOH . U 8 HOH A 53 553 273 HOH HOH . U 8 HOH A 54 554 367 HOH HOH . U 8 HOH A 55 555 294 HOH HOH . U 8 HOH A 56 556 331 HOH HOH . U 8 HOH A 57 557 349 HOH HOH . U 8 HOH A 58 558 344 HOH HOH . U 8 HOH A 59 559 323 HOH HOH . U 8 HOH A 60 560 200 HOH HOH . U 8 HOH A 61 561 322 HOH HOH . U 8 HOH A 62 562 148 HOH HOH . U 8 HOH A 63 563 227 HOH HOH . U 8 HOH A 64 564 262 HOH HOH . U 8 HOH A 65 565 368 HOH HOH . U 8 HOH A 66 566 259 HOH HOH . U 8 HOH A 67 567 338 HOH HOH . U 8 HOH A 68 568 337 HOH HOH . U 8 HOH A 69 569 295 HOH HOH . U 8 HOH A 70 570 193 HOH HOH . U 8 HOH A 71 571 254 HOH HOH . U 8 HOH A 72 572 235 HOH HOH . U 8 HOH A 73 573 297 HOH HOH . U 8 HOH A 74 574 240 HOH HOH . U 8 HOH A 75 575 241 HOH HOH . V 8 HOH B 1 401 289 HOH HOH . V 8 HOH B 2 402 197 HOH HOH . V 8 HOH B 3 403 164 HOH HOH . V 8 HOH B 4 404 361 HOH HOH . V 8 HOH B 5 405 351 HOH HOH . V 8 HOH B 6 406 178 HOH HOH . V 8 HOH B 7 407 316 HOH HOH . V 8 HOH B 8 408 314 HOH HOH . V 8 HOH B 9 409 219 HOH HOH . V 8 HOH B 10 410 177 HOH HOH . V 8 HOH B 11 411 327 HOH HOH . V 8 HOH B 12 412 315 HOH HOH . V 8 HOH B 13 413 213 HOH HOH . V 8 HOH B 14 414 4 HOH HOH . V 8 HOH B 15 415 147 HOH HOH . V 8 HOH B 16 416 328 HOH HOH . V 8 HOH B 17 417 346 HOH HOH . V 8 HOH B 18 418 341 HOH HOH . V 8 HOH B 19 419 329 HOH HOH . V 8 HOH B 20 420 70 HOH HOH . V 8 HOH B 21 421 369 HOH HOH . V 8 HOH B 22 422 181 HOH HOH . V 8 HOH B 23 423 358 HOH HOH . V 8 HOH B 24 424 199 HOH HOH . V 8 HOH B 25 425 196 HOH HOH . V 8 HOH B 26 426 11 HOH HOH . V 8 HOH B 27 427 33 HOH HOH . V 8 HOH B 28 428 144 HOH HOH . V 8 HOH B 29 429 221 HOH HOH . V 8 HOH B 30 430 350 HOH HOH . V 8 HOH B 31 431 214 HOH HOH . V 8 HOH B 32 432 348 HOH HOH . V 8 HOH B 33 433 347 HOH HOH . V 8 HOH B 34 434 30 HOH HOH . V 8 HOH B 35 435 6 HOH HOH . V 8 HOH B 36 436 355 HOH HOH . V 8 HOH B 37 437 282 HOH HOH . V 8 HOH B 38 438 167 HOH HOH . V 8 HOH B 39 439 321 HOH HOH . V 8 HOH B 40 440 271 HOH HOH . V 8 HOH B 41 441 269 HOH HOH . V 8 HOH B 42 442 18 HOH HOH . V 8 HOH B 43 443 357 HOH HOH . V 8 HOH B 44 444 220 HOH HOH . V 8 HOH B 45 445 353 HOH HOH . V 8 HOH B 46 446 170 HOH HOH . V 8 HOH B 47 447 292 HOH HOH . V 8 HOH B 48 448 49 HOH HOH . V 8 HOH B 49 449 280 HOH HOH . V 8 HOH B 50 450 345 HOH HOH . V 8 HOH B 51 451 364 HOH HOH . V 8 HOH B 52 452 198 HOH HOH . V 8 HOH B 53 453 270 HOH HOH . V 8 HOH B 54 454 202 HOH HOH . V 8 HOH B 55 455 281 HOH HOH . V 8 HOH B 56 456 336 HOH HOH . V 8 HOH B 57 457 326 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 5 _atom_site.Cartn_x -2.299 _atom_site.Cartn_y -4.204 _atom_site.Cartn_z 26.092 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 408 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #