data_6R7X # _model_server_result.job_id JHuzfKOjXF2PL0HCrueeOg _model_server_result.datetime_utc '2024-11-04 22:43:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r7x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":706}' # _entry.id 6R7X # _exptl.entry_id 6R7X _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 496.589 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UNDECYL-MALTOSIDE _entity.pdbx_number_of_molecules 20 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R7X _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R7X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 Y N N ? 4 Z N N ? 4 AA N N ? 4 BA N N ? 4 CA N N ? 4 DA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 259 A GLU 259 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc2 A OD1 ASN 444 A ASN 444 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc3 A OE1 GLN 445 A GLN 445 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc4 A OE1 GLU 448 A GLU 448 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc5 A OE2 GLU 448 A GLU 448 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc6 A OD1 ASP 497 A ASP 497 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc7 A OE1 GLU 500 A GLU 500 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.882 ? metalc ? metalc8 A OE2 GLU 500 A GLU 500 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc9 A OE1 GLU 500 A GLU 500 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? metalc ? metalc10 A OE1 GLU 529 A GLU 529 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc11 A OE2 GLU 529 A GLU 529 1_555 C CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc12 A OE2 GLU 529 A GLU 529 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc13 A OD1 ASP 533 A ASP 533 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc14 A OD2 ASP 533 A ASP 533 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc15 A O ALA 610 A ALA 610 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc16 A O ILE 613 A ILE 613 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc17 A OD1 ASP 615 A ASP 615 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc18 B OE2 GLU 259 B GLU 259 1_555 T CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc19 B OD1 ASN 444 B ASN 444 1_555 R CA CA . B CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc20 B OE1 GLN 445 B GLN 445 1_555 R CA CA . B CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc21 B OE1 GLU 448 B GLU 448 1_555 R CA CA . B CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc22 B OE2 GLU 448 B GLU 448 1_555 S CA CA . B CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc23 B OD1 ASP 497 B ASP 497 1_555 S CA CA . B CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc24 B OE1 GLU 500 B GLU 500 1_555 R CA CA . B CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc25 B OE2 GLU 500 B GLU 500 1_555 R CA CA . B CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc26 B OE1 GLU 500 B GLU 500 1_555 S CA CA . B CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc27 B OE1 GLU 529 B GLU 529 1_555 R CA CA . B CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc28 B OE2 GLU 529 B GLU 529 1_555 R CA CA . B CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? metalc ? metalc29 B OE2 GLU 529 B GLU 529 1_555 S CA CA . B CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc30 B OD1 ASP 533 B ASP 533 1_555 S CA CA . B CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc31 B OD2 ASP 533 B ASP 533 1_555 S CA CA . B CA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc32 B O ALA 610 B ALA 610 1_555 T CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc33 B O ILE 613 B ILE 613 1_555 T CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc34 B OD1 ASP 615 B ASP 615 1_555 T CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? # _chem_comp.formula 'C23 H44 O11' _chem_comp.formula_weight 496.589 _chem_comp.id UMQ _chem_comp.mon_nstd_flag . _chem_comp.name UNDECYL-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms UNDECYL-BETA-D-MALTOPYRANOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O2 UMQ sing 497 n n C2 C1 UMQ sing 498 n n C2 C3 UMQ sing 499 n n C2 H21 UMQ sing 500 n n C4 C5 UMQ sing 501 n n C4 O4 UMQ sing 502 n n C4 C3 UMQ sing 503 n n C4 H41 UMQ sing 504 n n C5 C6 UMQ sing 505 n n C5 O5 UMQ sing 506 n n C5 H51 UMQ sing 507 n n C6 O6 UMQ sing 508 n n C6 H61 UMQ sing 509 n n C6 H62 UMQ sing 510 n n O2 HO21 UMQ sing 511 n n O4 HO41 UMQ sing 512 n n C1 O1 UMQ sing 513 n n C1 O5 UMQ sing 514 n n C1 H11 UMQ sing 515 n n C3 O3 UMQ sing 516 n n C3 H31 UMQ sing 517 n n O1 C4' UMQ sing 518 n n O3 HO31 UMQ sing 519 n n O6 HO61 UMQ sing 520 n n C1' C2' UMQ sing 521 n n C1' O1' UMQ sing 522 n n C1' O5' UMQ sing 523 n n C1' "H1'1" UMQ sing 524 n n C2' C3' UMQ sing 525 n n C2' O2' UMQ sing 526 n n C2' "H2'1" UMQ sing 527 n n C3' C4' UMQ sing 528 n n C3' O3' UMQ sing 529 n n C3' "H3'1" UMQ sing 530 n n C4' C5' UMQ sing 531 n n C4' "H4'1" UMQ sing 532 n n C5' C6' UMQ sing 533 n n C5' O5' UMQ sing 534 n n C5' "H5'1" UMQ sing 535 n n C6' O6' UMQ sing 536 n n C6' "H6'1" UMQ sing 537 n n C6' "H6'2" UMQ sing 538 n n O1' CA UMQ sing 539 n n O3' HO3' UMQ sing 540 n n O6' HO6' UMQ sing 541 n n O2' HO2' UMQ sing 542 n n CA CB UMQ sing 543 n n CA HA1 UMQ sing 544 n n CA HA2 UMQ sing 545 n n CB CC UMQ sing 546 n n CB HB1 UMQ sing 547 n n CB HB2 UMQ sing 548 n n CC CD UMQ sing 549 n n CC HC1 UMQ sing 550 n n CC HC2 UMQ sing 551 n n CD CF UMQ sing 552 n n CD HD1 UMQ sing 553 n n CD HD2 UMQ sing 554 n n CF CG UMQ sing 555 n n CF HF1 UMQ sing 556 n n CF HF2 UMQ sing 557 n n CG CH UMQ sing 558 n n CG HG1 UMQ sing 559 n n CG HG2 UMQ sing 560 n n CH CI UMQ sing 561 n n CH HH1 UMQ sing 562 n n CH HH2 UMQ sing 563 n n CI CJ UMQ sing 564 n n CI HI1 UMQ sing 565 n n CI HI2 UMQ sing 566 n n CJ CK UMQ sing 567 n n CJ HJ1 UMQ sing 568 n n CJ HJ2 UMQ sing 569 n n CK CL UMQ sing 570 n n CK HK1 UMQ sing 571 n n CK HK2 UMQ sing 572 n n CL HL1 UMQ sing 573 n n CL HL2 UMQ sing 574 n n CL HL3 UMQ sing 575 n n # _atom_sites.entry_id 6R7X _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 701 701 CA CA . D 2 CA A 1 702 702 CA CA . E 2 CA A 1 703 703 CA CA . F 3 PC1 A 1 704 801 PC1 PC1 . G 4 UMQ A 1 705 1001 UMQ UMQ . H 4 UMQ A 1 706 1101 UMQ UMQ . I 4 UMQ A 1 707 1201 UMQ UMQ . J 4 UMQ A 1 708 1301 UMQ UMQ . K 4 UMQ A 1 709 1401 UMQ UMQ . L 4 UMQ A 1 710 1501 UMQ UMQ . M 4 UMQ A 1 711 1601 UMQ UMQ . N 4 UMQ A 1 712 1701 UMQ UMQ . O 4 UMQ A 1 713 1801 UMQ UMQ . P 4 UMQ A 1 714 901 UMQ UMQ . Q 4 UMQ B 1 901 901 UMQ UMQ . R 2 CA B 1 902 701 CA CA . S 2 CA B 1 903 702 CA CA . T 2 CA B 1 904 703 CA CA . U 3 PC1 B 1 905 801 PC1 PC1 . V 4 UMQ B 1 906 1001 UMQ UMQ . W 4 UMQ B 1 907 1101 UMQ UMQ . X 4 UMQ B 1 908 1201 UMQ UMQ . Y 4 UMQ B 1 909 1301 UMQ UMQ . Z 4 UMQ B 1 910 1401 UMQ UMQ . AA 4 UMQ B 1 911 1501 UMQ UMQ . BA 4 UMQ B 1 912 1601 UMQ UMQ . CA 4 UMQ B 1 913 1701 UMQ UMQ . DA 4 UMQ B 1 914 1801 UMQ UMQ . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 UMQ . . . H 4 105.209 78.489 101.27 1 43.99 ? O1 UMQ 706 A 1 HETATM 2 C C1' UMQ . . . H 4 104.616 78.922 97.184 1 43.99 ? C1' UMQ 706 A 1 HETATM 3 C C2' UMQ . . . H 4 105.901 79.524 97.739 1 43.99 ? C2' UMQ 706 A 1 HETATM 4 C C3' UMQ . . . H 4 106.173 78.967 99.131 1 43.99 ? C3' UMQ 706 A 1 HETATM 5 C C4' UMQ . . . H 4 104.96 79.165 100.029 1 43.99 ? C4' UMQ 706 A 1 HETATM 6 C C5' UMQ . . . H 4 103.712 78.584 99.375 1 43.99 ? C5' UMQ 706 A 1 HETATM 7 C C6' UMQ . . . H 4 102.442 78.849 100.15 1 43.99 ? C6' UMQ 706 A 1 HETATM 8 O O1' UMQ . . . H 4 104.375 79.493 95.931 1 43.99 ? O1' UMQ 706 A 1 HETATM 9 O O3' UMQ . . . H 4 107.319 79.595 99.692 1 43.99 ? O3' UMQ 706 A 1 HETATM 10 O O5' UMQ . . . H 4 103.535 79.168 98.071 1 43.99 ? O5' UMQ 706 A 1 HETATM 11 O O6' UMQ . . . H 4 101.316 78.246 99.525 1 43.99 ? O6' UMQ 706 A 1 HETATM 12 O O2' UMQ . . . H 4 106.986 79.216 96.875 1 43.99 ? O2' UMQ 706 A 1 HETATM 13 C CA UMQ . . . H 4 104.393 78.551 94.858 1 43.99 ? CA UMQ 706 A 1 HETATM 14 C CB UMQ . . . H 4 102.98 78.332 94.39 1 43.99 ? CB UMQ 706 A 1 HETATM 15 C CC UMQ . . . H 4 102.574 79.238 93.244 1 43.99 ? CC UMQ 706 A 1 HETATM 16 C CD UMQ . . . H 4 103.045 78.753 91.884 1 43.99 ? CD UMQ 706 A 1 HETATM 17 C CF UMQ . . . H 4 102.388 79.479 90.724 1 43.99 ? CF UMQ 706 A 1 HETATM 18 C CG UMQ . . . H 4 102.479 78.74 89.401 1 43.99 ? CG UMQ 706 A 1 HETATM 19 C CH UMQ . . . H 4 101.595 79.332 88.316 1 43.99 ? CH UMQ 706 A 1 HETATM 20 C CI UMQ . . . H 4 101.422 78.437 87.102 1 43.99 ? CI UMQ 706 A 1 HETATM 21 C CJ UMQ . . . H 4 100.329 78.903 86.157 1 43.99 ? CJ UMQ 706 A 1 HETATM 22 C CK UMQ . . . H 4 100.014 77.928 85.044 1 43.99 ? CK UMQ 706 A 1 HETATM 23 C CL UMQ . . . H 4 98.857 78.369 84.179 1 43.99 ? CL UMQ 706 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #