data_6R8A # _model_server_result.job_id qRXJ-yE-tAEUg-rOeZ91kQ _model_server_result.datetime_utc '2024-11-06 17:40:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r8a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 6R8A # _exptl.entry_id 6R8A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 149.211 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description METHIONINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R8A _cell.length_a 95.48 _cell.length_b 96.8 _cell.length_c 114.79 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R8A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,K 1 1 B,G 2 1 C,H 3 1 D,I,J 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 192 A CYS 189 1_555 A SG CYS 246 A CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? disulf ? disulf2 B SG CYS 192 B CYS 189 1_555 B SG CYS 246 B CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 C SG CYS 192 C CYS 189 1_555 C SG CYS 246 C CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? # _chem_comp.formula 'C5 H11 N O2 S' _chem_comp.formula_weight 149.211 _chem_comp.id MET _chem_comp.mon_nstd_flag y _chem_comp.name METHIONINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA MET sing 218 n n N H MET sing 219 n n N H2 MET sing 220 n n CA C MET sing 221 n n CA CB MET sing 222 n n CA HA MET sing 223 n n C O MET doub 224 n n C OXT MET sing 225 n n CB CG MET sing 226 n n CB HB2 MET sing 227 n n CB HB3 MET sing 228 n n CG SD MET sing 229 n n CG HG2 MET sing 230 n n CG HG3 MET sing 231 n n SD CE MET sing 232 n n CE HE1 MET sing 233 n n CE HE2 MET sing 234 n n CE HE3 MET sing 235 n n OXT HXT MET sing 236 n n # _atom_sites.entry_id 6R8A _atom_sites.fract_transf_matrix[1][1] 0.010473 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010331 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008712 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MET A 1 301 1 MET MET . F 3 NA A 1 302 1 NA NA . G 2 MET B 1 301 2 MET MET . H 2 MET C 1 301 3 MET MET . I 2 MET D 1 301 4 MET MET . J 4 SO4 D 1 302 1 SO4 SO4 . K 5 HOH A 1 401 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N MET . . . G 2 -35.938 9.473 30.044 1 44.42 ? N MET 301 B 1 HETATM 2 C CA MET . . . G 2 -35.136 8.225 29.943 1 44.63 ? CA MET 301 B 1 HETATM 3 C C MET . . . G 2 -35.718 7.302 28.851 1 44.45 ? C MET 301 B 1 HETATM 4 O O MET . . . G 2 -34.982 6.562 28.18 1 42.51 ? O MET 301 B 1 HETATM 5 C CB MET . . . G 2 -35.156 7.509 31.293 1 46.81 ? CB MET 301 B 1 HETATM 6 C CG MET . . . G 2 -34.208 6.343 31.399 1 47.84 ? CG MET 301 B 1 HETATM 7 S SD MET . . . G 2 -32.791 6.732 32.427 1 46.5 ? SD MET 301 B 1 HETATM 8 C CE MET . . . G 2 -32.727 5.214 33.378 1 44.7 ? CE MET 301 B 1 HETATM 9 O OXT MET . . . G 2 -36.931 7.234 28.582 1 42.66 ? OXT MET 301 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 9 #