data_6R8P # _model_server_result.job_id 4C89O0BYT50fPih0uynMMQ _model_server_result.datetime_utc '2024-11-05 16:40:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r8p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":517}' # _entry.id 6R8P # _exptl.entry_id 6R8P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 242.273 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2-methylphenoxy)-~{N}-pyridin-3-yl-ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R8P _cell.length_a 60.615 _cell.length_b 72.791 _cell.length_c 78.867 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R8P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id R _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? disulf ? disulf6 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf7 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf8 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 B C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.42 ? # _chem_comp.formula 'C14 H14 N2 O2' _chem_comp.formula_weight 242.273 _chem_comp.id JVB _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2-methylphenoxy)-~{N}-pyridin-3-yl-ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6R8P _atom_sites.fract_transf_matrix[1][1] 0.016497 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013738 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01268 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 501 454 NAG NAG . C 3 GOL A 1 502 501 GOL GOL . D 3 GOL A 1 503 503 GOL GOL . E 4 SO4 A 1 504 510 SO4 SO4 . F 4 SO4 A 1 505 511 SO4 SO4 . G 4 SO4 A 1 506 513 SO4 SO4 . H 4 SO4 A 1 507 514 SO4 SO4 . I 4 SO4 A 1 508 515 SO4 SO4 . J 4 SO4 A 1 509 516 SO4 SO4 . K 4 SO4 A 1 510 517 SO4 SO4 . L 4 SO4 A 1 511 518 SO4 SO4 . M 4 SO4 A 1 512 519 SO4 SO4 . N 4 SO4 A 1 513 520 SO4 SO4 . O 4 SO4 A 1 514 521 SO4 SO4 . P 4 SO4 A 1 515 522 SO4 SO4 . Q 5 DMS A 1 516 801 DMS DMS . R 6 JVB A 1 517 1 JVB LIG . S 7 HOH A 1 601 705 HOH HOH . S 7 HOH A 2 602 680 HOH HOH . S 7 HOH A 3 603 682 HOH HOH . S 7 HOH A 4 604 594 HOH HOH . S 7 HOH A 5 605 553 HOH HOH . S 7 HOH A 6 606 562 HOH HOH . S 7 HOH A 7 607 623 HOH HOH . S 7 HOH A 8 608 643 HOH HOH . S 7 HOH A 9 609 576 HOH HOH . S 7 HOH A 10 610 629 HOH HOH . S 7 HOH A 11 611 558 HOH HOH . S 7 HOH A 12 612 765 HOH HOH . S 7 HOH A 13 613 544 HOH HOH . S 7 HOH A 14 614 792 HOH HOH . S 7 HOH A 15 615 549 HOH HOH . S 7 HOH A 16 616 548 HOH HOH . S 7 HOH A 17 617 678 HOH HOH . S 7 HOH A 18 618 719 HOH HOH . S 7 HOH A 19 619 604 HOH HOH . S 7 HOH A 20 620 597 HOH HOH . S 7 HOH A 21 621 644 HOH HOH . S 7 HOH A 22 622 666 HOH HOH . S 7 HOH A 23 623 641 HOH HOH . S 7 HOH A 24 624 755 HOH HOH . S 7 HOH A 25 625 677 HOH HOH . S 7 HOH A 26 626 600 HOH HOH . S 7 HOH A 27 627 569 HOH HOH . S 7 HOH A 28 628 532 HOH HOH . S 7 HOH A 29 629 615 HOH HOH . S 7 HOH A 30 630 596 HOH HOH . S 7 HOH A 31 631 745 HOH HOH . S 7 HOH A 32 632 632 HOH HOH . S 7 HOH A 33 633 612 HOH HOH . S 7 HOH A 34 634 721 HOH HOH . S 7 HOH A 35 635 642 HOH HOH . S 7 HOH A 36 636 646 HOH HOH . S 7 HOH A 37 637 625 HOH HOH . S 7 HOH A 38 638 710 HOH HOH . S 7 HOH A 39 639 551 HOH HOH . S 7 HOH A 40 640 614 HOH HOH . S 7 HOH A 41 641 654 HOH HOH . S 7 HOH A 42 642 714 HOH HOH . S 7 HOH A 43 643 655 HOH HOH . S 7 HOH A 44 644 786 HOH HOH . S 7 HOH A 45 645 539 HOH HOH . S 7 HOH A 46 646 650 HOH HOH . S 7 HOH A 47 647 639 HOH HOH . S 7 HOH A 48 648 538 HOH HOH . S 7 HOH A 49 649 793 HOH HOH . S 7 HOH A 50 650 636 HOH HOH . S 7 HOH A 51 651 694 HOH HOH . S 7 HOH A 52 652 687 HOH HOH . S 7 HOH A 53 653 633 HOH HOH . S 7 HOH A 54 654 659 HOH HOH . S 7 HOH A 55 655 627 HOH HOH . S 7 HOH A 56 656 661 HOH HOH . S 7 HOH A 57 657 616 HOH HOH . S 7 HOH A 58 658 681 HOH HOH . S 7 HOH A 59 659 591 HOH HOH . S 7 HOH A 60 660 599 HOH HOH . S 7 HOH A 61 661 670 HOH HOH . S 7 HOH A 62 662 530 HOH HOH . S 7 HOH A 63 663 693 HOH HOH . S 7 HOH A 64 664 648 HOH HOH . S 7 HOH A 65 665 537 HOH HOH . S 7 HOH A 66 666 608 HOH HOH . S 7 HOH A 67 667 607 HOH HOH . S 7 HOH A 68 668 603 HOH HOH . S 7 HOH A 69 669 541 HOH HOH . S 7 HOH A 70 670 720 HOH HOH . S 7 HOH A 71 671 590 HOH HOH . S 7 HOH A 72 672 634 HOH HOH . S 7 HOH A 73 673 546 HOH HOH . S 7 HOH A 74 674 602 HOH HOH . S 7 HOH A 75 675 664 HOH HOH . S 7 HOH A 76 676 598 HOH HOH . S 7 HOH A 77 677 660 HOH HOH . S 7 HOH A 78 678 688 HOH HOH . S 7 HOH A 79 679 547 HOH HOH . S 7 HOH A 80 680 609 HOH HOH . S 7 HOH A 81 681 683 HOH HOH . S 7 HOH A 82 682 533 HOH HOH . S 7 HOH A 83 683 746 HOH HOH . S 7 HOH A 84 684 689 HOH HOH . S 7 HOH A 85 685 626 HOH HOH . S 7 HOH A 86 686 574 HOH HOH . S 7 HOH A 87 687 622 HOH HOH . S 7 HOH A 88 688 702 HOH HOH . S 7 HOH A 89 689 653 HOH HOH . S 7 HOH A 90 690 563 HOH HOH . S 7 HOH A 91 691 631 HOH HOH . S 7 HOH A 92 692 675 HOH HOH . S 7 HOH A 93 693 663 HOH HOH . S 7 HOH A 94 694 658 HOH HOH . S 7 HOH A 95 695 667 HOH HOH . S 7 HOH A 96 696 606 HOH HOH . S 7 HOH A 97 697 750 HOH HOH . S 7 HOH A 98 698 561 HOH HOH . S 7 HOH A 99 699 601 HOH HOH . S 7 HOH A 100 700 611 HOH HOH . S 7 HOH A 101 701 637 HOH HOH . S 7 HOH A 102 702 645 HOH HOH . S 7 HOH A 103 703 729 HOH HOH . S 7 HOH A 104 704 669 HOH HOH . S 7 HOH A 105 705 674 HOH HOH . S 7 HOH A 106 706 736 HOH HOH . S 7 HOH A 107 707 679 HOH HOH . S 7 HOH A 108 708 711 HOH HOH . S 7 HOH A 109 709 673 HOH HOH . S 7 HOH A 110 710 744 HOH HOH . S 7 HOH A 111 711 635 HOH HOH . S 7 HOH A 112 712 610 HOH HOH . S 7 HOH A 113 713 619 HOH HOH . S 7 HOH A 114 714 795 HOH HOH . S 7 HOH A 115 715 738 HOH HOH . S 7 HOH A 116 716 595 HOH HOH . S 7 HOH A 117 717 638 HOH HOH . S 7 HOH A 118 718 555 HOH HOH . S 7 HOH A 119 719 540 HOH HOH . S 7 HOH A 120 720 592 HOH HOH . S 7 HOH A 121 721 716 HOH HOH . S 7 HOH A 122 722 552 HOH HOH . S 7 HOH A 123 723 589 HOH HOH . S 7 HOH A 124 724 556 HOH HOH . S 7 HOH A 125 725 709 HOH HOH . S 7 HOH A 126 726 542 HOH HOH . S 7 HOH A 127 727 787 HOH HOH . S 7 HOH A 128 728 613 HOH HOH . S 7 HOH A 129 729 662 HOH HOH . S 7 HOH A 130 730 794 HOH HOH . S 7 HOH A 131 731 751 HOH HOH . S 7 HOH A 132 732 776 HOH HOH . S 7 HOH A 133 733 728 HOH HOH . S 7 HOH A 134 734 585 HOH HOH . S 7 HOH A 135 735 531 HOH HOH . S 7 HOH A 136 736 593 HOH HOH . S 7 HOH A 137 737 586 HOH HOH . S 7 HOH A 138 738 758 HOH HOH . S 7 HOH A 139 739 725 HOH HOH . S 7 HOH A 140 740 568 HOH HOH . S 7 HOH A 141 741 749 HOH HOH . S 7 HOH A 142 742 708 HOH HOH . S 7 HOH A 143 743 559 HOH HOH . S 7 HOH A 144 744 748 HOH HOH . S 7 HOH A 145 745 737 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 JVB . . . R 6 4.233 -4.563 6.774 1 52.38 ? C10 JVB 517 A 1 HETATM 2 N N12 JVB . . . R 6 4.194 -5.498 7.945 1 52.8 ? N12 JVB 517 A 1 HETATM 3 C C13 JVB . . . R 6 5.363 -5.692 8.952 1 52.85 ? C13 JVB 517 A 1 HETATM 4 C C15 JVB . . . R 6 6.162 -6.354 11.134 1 52.48 ? C15 JVB 517 A 1 HETATM 5 C C01 JVB . . . R 6 0.937 -7.792 6.799 1 51.93 ? C01 JVB 517 A 1 HETATM 6 C C02 JVB . . . R 6 0.337 -6.714 5.841 1 52.04 ? C02 JVB 517 A 1 HETATM 7 C C03 JVB . . . R 6 -0.795 -7.02 5.089 1 52.23 ? C03 JVB 517 A 1 HETATM 8 C C04 JVB . . . R 6 -1.316 -6.074 4.229 1 52.31 ? C04 JVB 517 A 1 HETATM 9 C C05 JVB . . . R 6 -0.716 -4.824 4.112 1 52.24 ? C05 JVB 517 A 1 HETATM 10 C C06 JVB . . . R 6 0.414 -4.503 4.865 1 52.05 ? C06 JVB 517 A 1 HETATM 11 C C07 JVB . . . R 6 0.932 -5.474 5.726 1 51.97 ? C07 JVB 517 A 1 HETATM 12 C C09 JVB . . . R 6 3.03 -4.446 5.856 1 52.06 ? C09 JVB 517 A 1 HETATM 13 C C14 JVB . . . R 6 5.105 -6.18 10.231 1 52.77 ? C14 JVB 517 A 1 HETATM 14 C C16 JVB . . . R 6 7.474 -6.025 10.715 1 52.31 ? C16 JVB 517 A 1 HETATM 15 C C18 JVB . . . R 6 6.696 -5.4 8.619 1 52.65 ? C18 JVB 517 A 1 HETATM 16 N N17 JVB . . . R 6 7.682 -5.571 9.502 1 52.33 ? N17 JVB 517 A 1 HETATM 17 O O08 JVB . . . R 6 2.029 -5.198 6.483 1 51.91 ? O08 JVB 517 A 1 HETATM 18 O O11 JVB . . . R 6 5.141 -3.91 6.558 1 52.27 ? O11 JVB 517 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 18 #