data_6R9H # _model_server_result.job_id GhjoqHQ180wzHDe7YZfGrA _model_server_result.datetime_utc '2024-12-23 01:27:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r9h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":302}' # _entry.id 6R9H # _exptl.entry_id 6R9H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.789 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{S})-2-[2-(4-chlorophenyl)sulfanylethanoylamino]-3-methyl-butanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 82.59 _cell.angle_beta 84.21 _cell.angle_gamma 78.59 _cell.entry_id 6R9H _cell.length_a 28.937 _cell.length_b 56.185 _cell.length_c 100.874 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R9H _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,J,K,N,P 1 1 B,D,I,L,M,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 K N N # _chem_comp.formula 'C13 H16 Cl N O3 S' _chem_comp.formula_weight 301.789 _chem_comp.id JVK _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{S})-2-[2-(4-chlorophenyl)sulfanylethanoylamino]-3-methyl-butanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C9 JVK doub 179 n n C12 C10 JVK sing 180 n n C9 O1 JVK sing 181 n n C9 C8 JVK sing 182 n n N C8 JVK sing 183 n n N C7 JVK sing 184 n n S C6 JVK sing 185 n n S C1 JVK sing 186 n n C8 C10 JVK sing 187 n n C6 C7 JVK sing 188 n n C10 C11 JVK sing 189 n n C7 O JVK doub 190 n n C2 C1 JVK doub 191 n y C2 C3 JVK sing 192 n y C1 C JVK sing 193 n y C3 C4 JVK doub 194 n y C C5 JVK doub 195 n y C4 C5 JVK sing 196 n y C4 CL JVK sing 197 n n C H1 JVK sing 198 n n N H2 JVK sing 199 n n C2 H3 JVK sing 200 n n C3 H4 JVK sing 201 n n C5 H5 JVK sing 202 n n C6 H6 JVK sing 203 n n C6 H7 JVK sing 204 n n C8 H8 JVK sing 205 n n C10 H9 JVK sing 206 n n C11 H10 JVK sing 207 n n C11 H11 JVK sing 208 n n C11 H12 JVK sing 209 n n C12 H13 JVK sing 210 n n C12 H14 JVK sing 211 n n C12 H15 JVK sing 212 n n O1 H16 JVK sing 213 n n # _atom_sites.entry_id 6R9H _atom_sites.fract_transf_matrix[1][1] 0.034558 _atom_sites.fract_transf_matrix[1][2] -0.006974 _atom_sites.fract_transf_matrix[1][3] -0.002745 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018157 _atom_sites.fract_transf_matrix[2][3] -0.002042 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010027 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 301 1 PO4 PO4 . F 2 PO4 A 1 302 5 PO4 PO4 . G 3 JVK A 1 303 1 JVK C58 . H 4 ACT A 1 304 3 ACT ACT . I 4 ACT B 1 301 4 ACT ACT . J 2 PO4 C 1 301 2 PO4 PO4 . K 3 JVK C 1 302 2 JVK C58 . L 2 PO4 D 1 301 3 PO4 PO4 . M 4 ACT D 1 302 4 ACT ACT . N 5 HOH A 1 401 206 HOH HOH . N 5 HOH A 2 402 144 HOH HOH . N 5 HOH A 3 403 65 HOH HOH . N 5 HOH A 4 404 127 HOH HOH . N 5 HOH A 5 405 64 HOH HOH . N 5 HOH A 6 406 35 HOH HOH . N 5 HOH A 7 407 18 HOH HOH . N 5 HOH A 8 408 151 HOH HOH . N 5 HOH A 9 409 9 HOH HOH . N 5 HOH A 10 410 62 HOH HOH . N 5 HOH A 11 411 126 HOH HOH . N 5 HOH A 12 412 166 HOH HOH . N 5 HOH A 13 413 197 HOH HOH . N 5 HOH A 14 414 51 HOH HOH . N 5 HOH A 15 415 67 HOH HOH . N 5 HOH A 16 416 73 HOH HOH . N 5 HOH A 17 417 163 HOH HOH . N 5 HOH A 18 418 30 HOH HOH . N 5 HOH A 19 419 6 HOH HOH . N 5 HOH A 20 420 74 HOH HOH . N 5 HOH A 21 421 52 HOH HOH . N 5 HOH A 22 422 213 HOH HOH . N 5 HOH A 23 423 108 HOH HOH . N 5 HOH A 24 424 121 HOH HOH . N 5 HOH A 25 425 142 HOH HOH . N 5 HOH A 26 426 180 HOH HOH . N 5 HOH A 27 427 138 HOH HOH . N 5 HOH A 28 428 104 HOH HOH . N 5 HOH A 29 429 211 HOH HOH . N 5 HOH A 30 430 134 HOH HOH . N 5 HOH A 31 431 20 HOH HOH . N 5 HOH A 32 432 114 HOH HOH . N 5 HOH A 33 433 162 HOH HOH . N 5 HOH A 34 434 169 HOH HOH . N 5 HOH A 35 435 44 HOH HOH . N 5 HOH A 36 436 241 HOH HOH . N 5 HOH A 37 437 23 HOH HOH . N 5 HOH A 38 438 31 HOH HOH . N 5 HOH A 39 439 54 HOH HOH . N 5 HOH A 40 440 99 HOH HOH . N 5 HOH A 41 441 123 HOH HOH . N 5 HOH A 42 442 124 HOH HOH . N 5 HOH A 43 443 185 HOH HOH . N 5 HOH A 44 444 181 HOH HOH . N 5 HOH A 45 445 83 HOH HOH . N 5 HOH A 46 446 129 HOH HOH . N 5 HOH A 47 447 243 HOH HOH . N 5 HOH A 48 448 42 HOH HOH . N 5 HOH A 49 449 167 HOH HOH . N 5 HOH A 50 450 48 HOH HOH . N 5 HOH A 51 451 224 HOH HOH . N 5 HOH A 52 452 103 HOH HOH . N 5 HOH A 53 453 58 HOH HOH . N 5 HOH A 54 454 240 HOH HOH . N 5 HOH A 55 455 82 HOH HOH . N 5 HOH A 56 456 194 HOH HOH . N 5 HOH A 57 457 80 HOH HOH . N 5 HOH A 58 458 203 HOH HOH . N 5 HOH A 59 459 222 HOH HOH . N 5 HOH A 60 460 199 HOH HOH . N 5 HOH A 61 461 219 HOH HOH . N 5 HOH A 62 462 236 HOH HOH . O 5 HOH B 1 401 125 HOH HOH . O 5 HOH B 2 402 70 HOH HOH . O 5 HOH B 3 403 100 HOH HOH . O 5 HOH B 4 404 97 HOH HOH . O 5 HOH B 5 405 171 HOH HOH . O 5 HOH B 6 406 170 HOH HOH . O 5 HOH B 7 407 119 HOH HOH . O 5 HOH B 8 408 133 HOH HOH . O 5 HOH B 9 409 33 HOH HOH . O 5 HOH B 10 410 157 HOH HOH . O 5 HOH B 11 411 71 HOH HOH . O 5 HOH B 12 412 214 HOH HOH . O 5 HOH B 13 413 90 HOH HOH . O 5 HOH B 14 414 230 HOH HOH . O 5 HOH B 15 415 75 HOH HOH . O 5 HOH B 16 416 191 HOH HOH . O 5 HOH B 17 417 116 HOH HOH . O 5 HOH B 18 418 102 HOH HOH . O 5 HOH B 19 419 3 HOH HOH . O 5 HOH B 20 420 2 HOH HOH . O 5 HOH B 21 421 174 HOH HOH . O 5 HOH B 22 422 146 HOH HOH . O 5 HOH B 23 423 183 HOH HOH . O 5 HOH B 24 424 135 HOH HOH . O 5 HOH B 25 425 77 HOH HOH . O 5 HOH B 26 426 107 HOH HOH . O 5 HOH B 27 427 22 HOH HOH . O 5 HOH B 28 428 46 HOH HOH . O 5 HOH B 29 429 24 HOH HOH . O 5 HOH B 30 430 29 HOH HOH . O 5 HOH B 31 431 63 HOH HOH . O 5 HOH B 32 432 208 HOH HOH . O 5 HOH B 33 433 147 HOH HOH . O 5 HOH B 34 434 178 HOH HOH . O 5 HOH B 35 435 201 HOH HOH . O 5 HOH B 36 436 175 HOH HOH . O 5 HOH B 37 437 200 HOH HOH . O 5 HOH B 38 438 36 HOH HOH . O 5 HOH B 39 439 155 HOH HOH . O 5 HOH B 40 440 10 HOH HOH . O 5 HOH B 41 441 190 HOH HOH . O 5 HOH B 42 442 17 HOH HOH . O 5 HOH B 43 443 210 HOH HOH . O 5 HOH B 44 444 141 HOH HOH . O 5 HOH B 45 445 261 HOH HOH . O 5 HOH B 46 446 13 HOH HOH . O 5 HOH B 47 447 226 HOH HOH . O 5 HOH B 48 448 148 HOH HOH . O 5 HOH B 49 449 188 HOH HOH . O 5 HOH B 50 450 130 HOH HOH . O 5 HOH B 51 451 37 HOH HOH . O 5 HOH B 52 452 28 HOH HOH . O 5 HOH B 53 453 118 HOH HOH . O 5 HOH B 54 454 59 HOH HOH . O 5 HOH B 55 455 14 HOH HOH . O 5 HOH B 56 456 101 HOH HOH . O 5 HOH B 57 457 247 HOH HOH . O 5 HOH B 58 458 245 HOH HOH . O 5 HOH B 59 459 152 HOH HOH . O 5 HOH B 60 460 228 HOH HOH . O 5 HOH B 61 461 85 HOH HOH . O 5 HOH B 62 462 244 HOH HOH . O 5 HOH B 63 463 160 HOH HOH . O 5 HOH B 64 464 207 HOH HOH . O 5 HOH B 65 465 137 HOH HOH . O 5 HOH B 66 466 246 HOH HOH . O 5 HOH B 67 467 34 HOH HOH . O 5 HOH B 68 468 229 HOH HOH . O 5 HOH B 69 469 248 HOH HOH . P 5 HOH C 1 401 50 HOH HOH . P 5 HOH C 2 402 111 HOH HOH . P 5 HOH C 3 403 78 HOH HOH . P 5 HOH C 4 404 122 HOH HOH . P 5 HOH C 5 405 84 HOH HOH . P 5 HOH C 6 406 92 HOH HOH . P 5 HOH C 7 407 232 HOH HOH . P 5 HOH C 8 408 117 HOH HOH . P 5 HOH C 9 409 264 HOH HOH . P 5 HOH C 10 410 143 HOH HOH . P 5 HOH C 11 411 136 HOH HOH . P 5 HOH C 12 412 237 HOH HOH . P 5 HOH C 13 413 89 HOH HOH . P 5 HOH C 14 414 204 HOH HOH . P 5 HOH C 15 415 41 HOH HOH . P 5 HOH C 16 416 49 HOH HOH . P 5 HOH C 17 417 53 HOH HOH . P 5 HOH C 18 418 252 HOH HOH . P 5 HOH C 19 419 94 HOH HOH . P 5 HOH C 20 420 131 HOH HOH . P 5 HOH C 21 421 140 HOH HOH . P 5 HOH C 22 422 231 HOH HOH . P 5 HOH C 23 423 1 HOH HOH . P 5 HOH C 24 424 81 HOH HOH . P 5 HOH C 25 425 106 HOH HOH . P 5 HOH C 26 426 218 HOH HOH . P 5 HOH C 27 427 145 HOH HOH . P 5 HOH C 28 428 61 HOH HOH . P 5 HOH C 29 429 216 HOH HOH . P 5 HOH C 30 430 195 HOH HOH . P 5 HOH C 31 431 187 HOH HOH . P 5 HOH C 32 432 12 HOH HOH . P 5 HOH C 33 433 56 HOH HOH . P 5 HOH C 34 434 235 HOH HOH . P 5 HOH C 35 435 251 HOH HOH . P 5 HOH C 36 436 16 HOH HOH . P 5 HOH C 37 437 57 HOH HOH . P 5 HOH C 38 438 120 HOH HOH . P 5 HOH C 39 439 110 HOH HOH . P 5 HOH C 40 440 192 HOH HOH . P 5 HOH C 41 441 149 HOH HOH . P 5 HOH C 42 442 11 HOH HOH . P 5 HOH C 43 443 159 HOH HOH . P 5 HOH C 44 444 39 HOH HOH . P 5 HOH C 45 445 115 HOH HOH . P 5 HOH C 46 446 43 HOH HOH . P 5 HOH C 47 447 186 HOH HOH . P 5 HOH C 48 448 223 HOH HOH . P 5 HOH C 49 449 76 HOH HOH . P 5 HOH C 50 450 182 HOH HOH . P 5 HOH C 51 451 105 HOH HOH . P 5 HOH C 52 452 249 HOH HOH . P 5 HOH C 53 453 227 HOH HOH . P 5 HOH C 54 454 250 HOH HOH . P 5 HOH C 55 455 93 HOH HOH . P 5 HOH C 56 456 234 HOH HOH . P 5 HOH C 57 457 239 HOH HOH . P 5 HOH C 58 458 217 HOH HOH . P 5 HOH C 59 459 15 HOH HOH . P 5 HOH C 60 460 242 HOH HOH . P 5 HOH C 61 461 205 HOH HOH . P 5 HOH C 62 462 238 HOH HOH . P 5 HOH C 63 463 233 HOH HOH . Q 5 HOH D 1 401 168 HOH HOH . Q 5 HOH D 2 402 260 HOH HOH . Q 5 HOH D 3 403 40 HOH HOH . Q 5 HOH D 4 404 173 HOH HOH . Q 5 HOH D 5 405 27 HOH HOH . Q 5 HOH D 6 406 158 HOH HOH . Q 5 HOH D 7 407 87 HOH HOH . Q 5 HOH D 8 408 38 HOH HOH . Q 5 HOH D 9 409 68 HOH HOH . Q 5 HOH D 10 410 193 HOH HOH . Q 5 HOH D 11 411 66 HOH HOH . Q 5 HOH D 12 412 32 HOH HOH . Q 5 HOH D 13 413 154 HOH HOH . Q 5 HOH D 14 414 91 HOH HOH . Q 5 HOH D 15 415 45 HOH HOH . Q 5 HOH D 16 416 165 HOH HOH . Q 5 HOH D 17 417 79 HOH HOH . Q 5 HOH D 18 418 88 HOH HOH . Q 5 HOH D 19 419 164 HOH HOH . Q 5 HOH D 20 420 86 HOH HOH . Q 5 HOH D 21 421 47 HOH HOH . Q 5 HOH D 22 422 19 HOH HOH . Q 5 HOH D 23 423 72 HOH HOH . Q 5 HOH D 24 424 113 HOH HOH . Q 5 HOH D 25 425 259 HOH HOH . Q 5 HOH D 26 426 179 HOH HOH . Q 5 HOH D 27 427 96 HOH HOH . Q 5 HOH D 28 428 109 HOH HOH . Q 5 HOH D 29 429 7 HOH HOH . Q 5 HOH D 30 430 189 HOH HOH . Q 5 HOH D 31 431 198 HOH HOH . Q 5 HOH D 32 432 253 HOH HOH . Q 5 HOH D 33 433 215 HOH HOH . Q 5 HOH D 34 434 150 HOH HOH . Q 5 HOH D 35 435 69 HOH HOH . Q 5 HOH D 36 436 176 HOH HOH . Q 5 HOH D 37 437 156 HOH HOH . Q 5 HOH D 38 438 256 HOH HOH . Q 5 HOH D 39 439 196 HOH HOH . Q 5 HOH D 40 440 25 HOH HOH . Q 5 HOH D 41 441 177 HOH HOH . Q 5 HOH D 42 442 202 HOH HOH . Q 5 HOH D 43 443 98 HOH HOH . Q 5 HOH D 44 444 60 HOH HOH . Q 5 HOH D 45 445 161 HOH HOH . Q 5 HOH D 46 446 8 HOH HOH . Q 5 HOH D 47 447 5 HOH HOH . Q 5 HOH D 48 448 254 HOH HOH . Q 5 HOH D 49 449 225 HOH HOH . Q 5 HOH D 50 450 209 HOH HOH . Q 5 HOH D 51 451 212 HOH HOH . Q 5 HOH D 52 452 55 HOH HOH . Q 5 HOH D 53 453 26 HOH HOH . Q 5 HOH D 54 454 132 HOH HOH . Q 5 HOH D 55 455 184 HOH HOH . Q 5 HOH D 56 456 95 HOH HOH . Q 5 HOH D 57 457 258 HOH HOH . Q 5 HOH D 58 458 21 HOH HOH . Q 5 HOH D 59 459 257 HOH HOH . Q 5 HOH D 60 460 221 HOH HOH . Q 5 HOH D 61 461 263 HOH HOH . Q 5 HOH D 62 462 255 HOH HOH . Q 5 HOH D 63 463 220 HOH HOH . Q 5 HOH D 64 464 262 HOH HOH . Q 5 HOH D 65 465 153 HOH HOH . Q 5 HOH D 66 466 4 HOH HOH . Q 5 HOH D 67 467 139 HOH HOH . Q 5 HOH D 68 468 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C JVK . . . K 3 -5.754 21.348 -45.671 0.75 28.69 ? C JVK 302 C 1 HETATM 2 N N JVK . . . K 3 -8.147 24.193 -42.88 0.75 30.47 ? N JVK 302 C 1 HETATM 3 S S JVK . . . K 3 -5.324 22.107 -42.98 0.75 32.65 ? S JVK 302 C 1 HETATM 4 C C1 JVK . . . K 3 -5.029 21.135 -44.489 0.75 30.82 ? C1 JVK 302 C 1 HETATM 5 C C2 JVK . . . K 3 -4.065 20.146 -44.4 0.75 30.9 ? C2 JVK 302 C 1 HETATM 6 C C3 JVK . . . K 3 -3.79 19.354 -45.489 0.75 30.76 ? C3 JVK 302 C 1 HETATM 7 C C4 JVK . . . K 3 -4.519 19.575 -46.662 0.75 30.09 ? C4 JVK 302 C 1 HETATM 8 C C5 JVK . . . K 3 -5.488 20.553 -46.748 0.75 29.58 ? C5 JVK 302 C 1 HETATM 9 C C6 JVK . . . K 3 -5.627 23.901 -43.169 0.75 32.85 ? C6 JVK 302 C 1 HETATM 10 C C7 JVK . . . K 3 -6.996 24.187 -43.773 0.75 33.65 ? C7 JVK 302 C 1 HETATM 11 C C8 JVK . . . K 3 -9.52 24.435 -43.35 0.75 27.11 ? C8 JVK 302 C 1 HETATM 12 C C9 JVK . . . K 3 -10.39 25.196 -42.337 0.75 25.52 ? C9 JVK 302 C 1 HETATM 13 C C10 JVK . . . K 3 -10.056 23.022 -43.525 0.75 28.85 ? C10 JVK 302 C 1 HETATM 14 C C11 JVK . . . K 3 -9.418 22.256 -44.715 0.75 28.63 ? C11 JVK 302 C 1 HETATM 15 C C12 JVK . . . K 3 -9.937 22.273 -42.187 0.75 27.6 ? C12 JVK 302 C 1 HETATM 16 O O JVK . . . K 3 -7.096 24.425 -44.945 0.75 33.38 ? O JVK 302 C 1 HETATM 17 CL CL JVK . . . K 3 -4.226 18.563 -48.078 0.75 31.24 ? CL JVK 302 C 1 HETATM 18 O O1 JVK . . . K 3 -9.855 25.72 -41.336 0.75 23.11 ? O1 JVK 302 C 1 HETATM 19 O O2 JVK . . . K 3 -11.626 25.245 -42.553 0.75 25.5 ? O2 JVK 302 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 19 #