data_6R9S # _model_server_result.job_id dHBAA6VcY-Ip0MSyh-NG2w _model_server_result.datetime_utc '2024-11-08 08:51:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6r9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6R9S # _exptl.entry_id 6R9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6R9S _cell.length_a 57.382 _cell.length_b 57.382 _cell.length_c 88.119 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6R9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 6R9S _atom_sites.fract_transf_matrix[1][1] 0.017427 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017427 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011348 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JVN A 1 301 1 JVN INH . C 2 JVN A 1 302 1 JVN INH . D 3 1PE A 1 303 1 1PE 1PE . E 4 PG4 A 1 304 2 PG4 PG4 . F 5 SO4 A 1 305 3 SO4 SO4 . G 6 HOH A 1 401 62 HOH HOH . G 6 HOH A 2 402 89 HOH HOH . G 6 HOH A 3 403 92 HOH HOH . G 6 HOH A 4 404 101 HOH HOH . G 6 HOH A 5 405 10 HOH HOH . G 6 HOH A 6 406 43 HOH HOH . G 6 HOH A 7 407 82 HOH HOH . G 6 HOH A 8 408 12 HOH HOH . G 6 HOH A 9 409 93 HOH HOH . G 6 HOH A 10 410 42 HOH HOH . G 6 HOH A 11 411 143 HOH HOH . G 6 HOH A 12 412 100 HOH HOH . G 6 HOH A 13 413 24 HOH HOH . G 6 HOH A 14 414 19 HOH HOH . G 6 HOH A 15 415 144 HOH HOH . G 6 HOH A 16 416 129 HOH HOH . G 6 HOH A 17 417 45 HOH HOH . G 6 HOH A 18 418 65 HOH HOH . G 6 HOH A 19 419 13 HOH HOH . G 6 HOH A 20 420 30 HOH HOH . G 6 HOH A 21 421 29 HOH HOH . G 6 HOH A 22 422 150 HOH HOH . G 6 HOH A 23 423 27 HOH HOH . G 6 HOH A 24 424 26 HOH HOH . G 6 HOH A 25 425 108 HOH HOH . G 6 HOH A 26 426 78 HOH HOH . G 6 HOH A 27 427 105 HOH HOH . G 6 HOH A 28 428 57 HOH HOH . G 6 HOH A 29 429 77 HOH HOH . G 6 HOH A 30 430 166 HOH HOH . G 6 HOH A 31 431 39 HOH HOH . G 6 HOH A 32 432 47 HOH HOH . G 6 HOH A 33 433 20 HOH HOH . G 6 HOH A 34 434 4 HOH HOH . G 6 HOH A 35 435 33 HOH HOH . G 6 HOH A 36 436 169 HOH HOH . G 6 HOH A 37 437 75 HOH HOH . G 6 HOH A 38 438 16 HOH HOH . G 6 HOH A 39 439 14 HOH HOH . G 6 HOH A 40 440 73 HOH HOH . G 6 HOH A 41 441 94 HOH HOH . G 6 HOH A 42 442 46 HOH HOH . G 6 HOH A 43 443 25 HOH HOH . G 6 HOH A 44 444 15 HOH HOH . G 6 HOH A 45 445 21 HOH HOH . G 6 HOH A 46 446 1 HOH HOH . G 6 HOH A 47 447 35 HOH HOH . G 6 HOH A 48 448 131 HOH HOH . G 6 HOH A 49 449 110 HOH HOH . G 6 HOH A 50 450 64 HOH HOH . G 6 HOH A 51 451 7 HOH HOH . G 6 HOH A 52 452 91 HOH HOH . G 6 HOH A 53 453 34 HOH HOH . G 6 HOH A 54 454 2 HOH HOH . G 6 HOH A 55 455 117 HOH HOH . G 6 HOH A 56 456 58 HOH HOH . G 6 HOH A 57 457 23 HOH HOH . G 6 HOH A 58 458 16 HOH HOH . G 6 HOH A 59 459 114 HOH HOH . G 6 HOH A 60 460 153 HOH HOH . G 6 HOH A 61 461 44 HOH HOH . G 6 HOH A 62 462 81 HOH HOH . G 6 HOH A 63 463 21 HOH HOH . G 6 HOH A 64 464 120 HOH HOH . G 6 HOH A 65 465 95 HOH HOH . G 6 HOH A 66 466 107 HOH HOH . G 6 HOH A 67 467 37 HOH HOH . G 6 HOH A 68 468 106 HOH HOH . G 6 HOH A 69 469 40 HOH HOH . G 6 HOH A 70 470 67 HOH HOH . G 6 HOH A 71 471 22 HOH HOH . G 6 HOH A 72 472 54 HOH HOH . G 6 HOH A 73 473 3 HOH HOH . G 6 HOH A 74 474 98 HOH HOH . G 6 HOH A 75 475 69 HOH HOH . G 6 HOH A 76 476 17 HOH HOH . G 6 HOH A 77 477 55 HOH HOH . G 6 HOH A 78 478 79 HOH HOH . G 6 HOH A 79 479 31 HOH HOH . G 6 HOH A 80 480 80 HOH HOH . G 6 HOH A 81 481 11 HOH HOH . G 6 HOH A 82 482 41 HOH HOH . G 6 HOH A 83 483 119 HOH HOH . G 6 HOH A 84 484 6 HOH HOH . G 6 HOH A 85 485 102 HOH HOH . G 6 HOH A 86 486 96 HOH HOH . G 6 HOH A 87 487 18 HOH HOH . G 6 HOH A 88 488 158 HOH HOH . G 6 HOH A 89 489 83 HOH HOH . G 6 HOH A 90 490 28 HOH HOH . G 6 HOH A 91 491 104 HOH HOH . G 6 HOH A 92 492 172 HOH HOH . G 6 HOH A 93 493 146 HOH HOH . G 6 HOH A 94 494 36 HOH HOH . G 6 HOH A 95 495 70 HOH HOH . G 6 HOH A 96 496 1 HOH HOH . G 6 HOH A 97 497 97 HOH HOH . G 6 HOH A 98 498 103 HOH HOH . G 6 HOH A 99 499 109 HOH HOH . G 6 HOH A 100 500 148 HOH HOH . G 6 HOH A 101 501 32 HOH HOH . G 6 HOH A 102 502 7 HOH HOH . G 6 HOH A 103 503 53 HOH HOH . G 6 HOH A 104 504 118 HOH HOH . G 6 HOH A 105 505 48 HOH HOH . G 6 HOH A 106 506 171 HOH HOH . G 6 HOH A 107 507 56 HOH HOH . G 6 HOH A 108 508 50 HOH HOH . G 6 HOH A 109 509 23 HOH HOH . G 6 HOH A 110 510 121 HOH HOH . G 6 HOH A 111 511 9 HOH HOH . G 6 HOH A 112 512 76 HOH HOH . G 6 HOH A 113 513 9 HOH HOH . G 6 HOH A 114 514 115 HOH HOH . G 6 HOH A 115 515 90 HOH HOH . G 6 HOH A 116 516 137 HOH HOH . G 6 HOH A 117 517 162 HOH HOH . G 6 HOH A 118 518 6 HOH HOH . G 6 HOH A 119 519 52 HOH HOH . G 6 HOH A 120 520 61 HOH HOH . G 6 HOH A 121 521 2 HOH HOH . G 6 HOH A 122 522 8 HOH HOH . G 6 HOH A 123 523 176 HOH HOH . G 6 HOH A 124 524 112 HOH HOH . G 6 HOH A 125 525 19 HOH HOH . G 6 HOH A 126 526 68 HOH HOH . G 6 HOH A 127 527 22 HOH HOH . G 6 HOH A 128 528 173 HOH HOH . G 6 HOH A 129 529 122 HOH HOH . G 6 HOH A 130 530 14 HOH HOH . G 6 HOH A 131 531 177 HOH HOH . G 6 HOH A 132 532 116 HOH HOH . G 6 HOH A 133 533 3 HOH HOH . G 6 HOH A 134 534 63 HOH HOH . G 6 HOH A 135 535 152 HOH HOH . G 6 HOH A 136 536 168 HOH HOH . G 6 HOH A 137 537 124 HOH HOH . G 6 HOH A 138 538 123 HOH HOH . G 6 HOH A 139 539 161 HOH HOH . G 6 HOH A 140 540 170 HOH HOH . G 6 HOH A 141 541 125 HOH HOH . G 6 HOH A 142 542 113 HOH HOH . G 6 HOH A 143 543 11 HOH HOH . G 6 HOH A 144 544 17 HOH HOH . G 6 HOH A 145 545 5 HOH HOH . G 6 HOH A 146 546 49 HOH HOH . G 6 HOH A 147 547 5 HOH HOH . G 6 HOH A 148 548 59 HOH HOH . G 6 HOH A 149 549 66 HOH HOH . G 6 HOH A 150 550 130 HOH HOH . G 6 HOH A 151 551 141 HOH HOH . G 6 HOH A 152 552 8 HOH HOH . G 6 HOH A 153 553 134 HOH HOH . G 6 HOH A 154 554 155 HOH HOH . G 6 HOH A 155 555 18 HOH HOH . G 6 HOH A 156 556 174 HOH HOH . G 6 HOH A 157 557 142 HOH HOH . G 6 HOH A 158 558 15 HOH HOH . G 6 HOH A 159 559 165 HOH HOH . G 6 HOH A 160 560 71 HOH HOH . G 6 HOH A 161 561 175 HOH HOH . G 6 HOH A 162 562 140 HOH HOH . G 6 HOH A 163 563 156 HOH HOH . G 6 HOH A 164 564 4 HOH HOH . G 6 HOH A 165 565 10 HOH HOH . G 6 HOH A 166 566 51 HOH HOH . G 6 HOH A 167 567 74 HOH HOH . G 6 HOH A 168 568 154 HOH HOH . G 6 HOH A 169 569 145 HOH HOH . G 6 HOH A 170 570 139 HOH HOH . G 6 HOH A 171 571 138 HOH HOH . G 6 HOH A 172 572 167 HOH HOH . G 6 HOH A 173 573 136 HOH HOH . G 6 HOH A 174 574 88 HOH HOH . G 6 HOH A 175 575 157 HOH HOH . G 6 HOH A 176 576 127 HOH HOH . G 6 HOH A 177 577 132 HOH HOH . G 6 HOH A 178 578 151 HOH HOH . G 6 HOH A 179 579 111 HOH HOH . G 6 HOH A 180 580 164 HOH HOH . G 6 HOH A 181 581 163 HOH HOH . G 6 HOH A 182 582 84 HOH HOH . G 6 HOH A 183 583 72 HOH HOH . G 6 HOH A 184 584 133 HOH HOH . G 6 HOH A 185 585 86 HOH HOH . G 6 HOH A 186 586 60 HOH HOH . G 6 HOH A 187 587 135 HOH HOH . G 6 HOH A 188 588 12 HOH HOH . G 6 HOH A 189 589 149 HOH HOH . G 6 HOH A 190 590 159 HOH HOH . G 6 HOH A 191 591 160 HOH HOH . G 6 HOH A 192 592 38 HOH HOH . G 6 HOH A 193 593 128 HOH HOH . G 6 HOH A 194 594 85 HOH HOH . G 6 HOH A 195 595 20 HOH HOH . G 6 HOH A 196 596 99 HOH HOH . G 6 HOH A 197 597 87 HOH HOH . G 6 HOH A 198 598 13 HOH HOH . G 6 HOH A 199 599 147 HOH HOH . G 6 HOH A 200 600 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . D 3 8.298 20.011 19.298 1 11.26 ? OH2 1PE 303 A 1 HETATM 2 C C12 1PE . . . D 3 9.179 21.08 18.91 1 9.7 ? C12 1PE 303 A 1 HETATM 3 C C22 1PE . . . D 3 8.413 22.409 18.92 1 13.96 ? C22 1PE 303 A 1 HETATM 4 O OH3 1PE . . . D 3 7.417 22.464 17.884 1 14.39 ? OH3 1PE 303 A 1 HETATM 5 C C13 1PE . . . D 3 5.777 23.812 16.679 1 21.42 ? C13 1PE 303 A 1 HETATM 6 C C23 1PE . . . D 3 6.683 23.694 17.906 1 19.26 ? C23 1PE 303 A 1 HETATM 7 O OH4 1PE . . . D 3 6.56 23.764 15.489 1 23 ? OH4 1PE 303 A 1 HETATM 8 C C14 1PE . . . D 3 6.075 24.562 13.254 1 32.63 ? C14 1PE 303 A 1 HETATM 9 C C24 1PE . . . D 3 6.464 24.938 14.678 1 29.08 ? C24 1PE 303 A 1 HETATM 10 O OH5 1PE . . . D 3 7.255 24.198 12.535 1 36.24 ? OH5 1PE 303 A 1 HETATM 11 C C15 1PE . . . D 3 7.577 22.807 10.573 1 37.58 ? C15 1PE 303 A 1 HETATM 12 C C25 1PE . . . D 3 7.035 24.125 11.122 1 37.13 ? C25 1PE 303 A 1 HETATM 13 O OH6 1PE . . . D 3 6.852 21.724 11.158 1 38.1 ? OH6 1PE 303 A 1 HETATM 14 C C16 1PE . . . D 3 5.937 19.507 10.943 1 39.37 ? C16 1PE 303 A 1 HETATM 15 C C26 1PE . . . D 3 6.967 20.507 10.419 1 38.83 ? C26 1PE 303 A 1 HETATM 16 O OH7 1PE . . . D 3 6.505 18.201 10.92 1 39.34 ? OH7 1PE 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #