data_6R9V
#
_model_server_result.job_id            eI98E80OubccklQWIryKeg 
_model_server_result.datetime_utc      '2025-09-01 03:29:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6r9v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    6R9V 
#
_exptl.entry_id    6R9V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6R9V 
_cell.length_a            135.53 
_cell.length_b            135.53 
_cell.length_c            124.86 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6R9V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_575 -x,-y+2,z -1 0 0 0 -1 0 0 0 1 0 271.06 0 
3 'crystal symmetry operation' 3_665 -y+1,x+1,z 0 -1 0 1 0 0 0 0 1 135.53 135.53 0 
4 'crystal symmetry operation' 4_465 y-1,-x+1,z 0 1 0 -1 0 0 0 0 1 -135.53 135.53 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 170 n n 
C1 C2 GOL sing 171 n n 
C1 H11 GOL sing 172 n n 
C1 H12 GOL sing 173 n n 
O1 HO1 GOL sing 174 n n 
C2 O2 GOL sing 175 n n 
C2 C3 GOL sing 176 n n 
C2 H2 GOL sing 177 n n 
O2 HO2 GOL sing 178 n n 
C3 O3 GOL sing 179 n n 
C3 H31 GOL sing 180 n n 
C3 H32 GOL sing 181 n n 
O3 HO3 GOL sing 182 n n 
#
_atom_sites.entry_id                     6R9V 
_atom_sites.fract_transf_matrix[1][1]    0.007378 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007378 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008009 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMN A 1 401 400 FMN FMN . 
C 3 PG4 A 1 402 500 PG4 PG4 . 
D 4 GOL A 1 403 501 GOL GOL . 
E 4 GOL A 1 404 502 GOL GOL . 
F 5 HOH A 1 501 828 HOH HOH . 
F 5 HOH A 2 502 706 HOH HOH . 
F 5 HOH A 3 503 813 HOH HOH . 
F 5 HOH A 4 504 774 HOH HOH . 
F 5 HOH A 5 505 692 HOH HOH . 
F 5 HOH A 6 506 725 HOH HOH . 
F 5 HOH A 7 507 745 HOH HOH . 
F 5 HOH A 8 508 729 HOH HOH . 
F 5 HOH A 9 509 670 HOH HOH . 
F 5 HOH A 10 510 617 HOH HOH . 
F 5 HOH A 11 511 754 HOH HOH . 
F 5 HOH A 12 512 688 HOH HOH . 
F 5 HOH A 13 513 802 HOH HOH . 
F 5 HOH A 14 514 770 HOH HOH . 
F 5 HOH A 15 515 777 HOH HOH . 
F 5 HOH A 16 516 718 HOH HOH . 
F 5 HOH A 17 517 621 HOH HOH . 
F 5 HOH A 18 518 704 HOH HOH . 
F 5 HOH A 19 519 695 HOH HOH . 
F 5 HOH A 20 520 733 HOH HOH . 
F 5 HOH A 21 521 760 HOH HOH . 
F 5 HOH A 22 522 689 HOH HOH . 
F 5 HOH A 23 523 634 HOH HOH . 
F 5 HOH A 24 524 762 HOH HOH . 
F 5 HOH A 25 525 632 HOH HOH . 
F 5 HOH A 26 526 763 HOH HOH . 
F 5 HOH A 27 527 775 HOH HOH . 
F 5 HOH A 28 528 771 HOH HOH . 
F 5 HOH A 29 529 654 HOH HOH . 
F 5 HOH A 30 530 810 HOH HOH . 
F 5 HOH A 31 531 664 HOH HOH . 
F 5 HOH A 32 532 684 HOH HOH . 
F 5 HOH A 33 533 747 HOH HOH . 
F 5 HOH A 34 534 626 HOH HOH . 
F 5 HOH A 35 535 644 HOH HOH . 
F 5 HOH A 36 536 711 HOH HOH . 
F 5 HOH A 37 537 655 HOH HOH . 
F 5 HOH A 38 538 712 HOH HOH . 
F 5 HOH A 39 539 627 HOH HOH . 
F 5 HOH A 40 540 699 HOH HOH . 
F 5 HOH A 41 541 650 HOH HOH . 
F 5 HOH A 42 542 727 HOH HOH . 
F 5 HOH A 43 543 691 HOH HOH . 
F 5 HOH A 44 544 638 HOH HOH . 
F 5 HOH A 45 545 794 HOH HOH . 
F 5 HOH A 46 546 715 HOH HOH . 
F 5 HOH A 47 547 646 HOH HOH . 
F 5 HOH A 48 548 657 HOH HOH . 
F 5 HOH A 49 549 831 HOH HOH . 
F 5 HOH A 50 550 703 HOH HOH . 
F 5 HOH A 51 551 724 HOH HOH . 
F 5 HOH A 52 552 630 HOH HOH . 
F 5 HOH A 53 553 707 HOH HOH . 
F 5 HOH A 54 554 611 HOH HOH . 
F 5 HOH A 55 555 603 HOH HOH . 
F 5 HOH A 56 556 681 HOH HOH . 
F 5 HOH A 57 557 716 HOH HOH . 
F 5 HOH A 58 558 767 HOH HOH . 
F 5 HOH A 59 559 709 HOH HOH . 
F 5 HOH A 60 560 660 HOH HOH . 
F 5 HOH A 61 561 797 HOH HOH . 
F 5 HOH A 62 562 738 HOH HOH . 
F 5 HOH A 63 563 812 HOH HOH . 
F 5 HOH A 64 564 789 HOH HOH . 
F 5 HOH A 65 565 740 HOH HOH . 
F 5 HOH A 66 566 742 HOH HOH . 
F 5 HOH A 67 567 719 HOH HOH . 
F 5 HOH A 68 568 830 HOH HOH . 
F 5 HOH A 69 569 717 HOH HOH . 
F 5 HOH A 70 570 798 HOH HOH . 
F 5 HOH A 71 571 749 HOH HOH . 
F 5 HOH A 72 572 600 HOH HOH . 
F 5 HOH A 73 573 675 HOH HOH . 
F 5 HOH A 74 574 737 HOH HOH . 
F 5 HOH A 75 575 668 HOH HOH . 
F 5 HOH A 76 576 710 HOH HOH . 
F 5 HOH A 77 577 682 HOH HOH . 
F 5 HOH A 78 578 790 HOH HOH . 
F 5 HOH A 79 579 652 HOH HOH . 
F 5 HOH A 80 580 612 HOH HOH . 
F 5 HOH A 81 581 836 HOH HOH . 
F 5 HOH A 82 582 614 HOH HOH . 
F 5 HOH A 83 583 604 HOH HOH . 
F 5 HOH A 84 584 723 HOH HOH . 
F 5 HOH A 85 585 834 HOH HOH . 
F 5 HOH A 86 586 811 HOH HOH . 
F 5 HOH A 87 587 648 HOH HOH . 
F 5 HOH A 88 588 610 HOH HOH . 
F 5 HOH A 89 589 809 HOH HOH . 
F 5 HOH A 90 590 609 HOH HOH . 
F 5 HOH A 91 591 616 HOH HOH . 
F 5 HOH A 92 592 624 HOH HOH . 
F 5 HOH A 93 593 601 HOH HOH . 
F 5 HOH A 94 594 835 HOH HOH . 
F 5 HOH A 95 595 613 HOH HOH . 
F 5 HOH A 96 596 618 HOH HOH . 
F 5 HOH A 97 597 735 HOH HOH . 
F 5 HOH A 98 598 606 HOH HOH . 
F 5 HOH A 99 599 768 HOH HOH . 
F 5 HOH A 100 600 620 HOH HOH . 
F 5 HOH A 101 601 820 HOH HOH . 
F 5 HOH A 102 602 764 HOH HOH . 
F 5 HOH A 103 603 671 HOH HOH . 
F 5 HOH A 104 604 680 HOH HOH . 
F 5 HOH A 105 605 686 HOH HOH . 
F 5 HOH A 106 606 819 HOH HOH . 
F 5 HOH A 107 607 643 HOH HOH . 
F 5 HOH A 108 608 658 HOH HOH . 
F 5 HOH A 109 609 796 HOH HOH . 
F 5 HOH A 110 610 607 HOH HOH . 
F 5 HOH A 111 611 647 HOH HOH . 
F 5 HOH A 112 612 666 HOH HOH . 
F 5 HOH A 113 613 804 HOH HOH . 
F 5 HOH A 114 614 739 HOH HOH . 
F 5 HOH A 115 615 818 HOH HOH . 
F 5 HOH A 116 616 678 HOH HOH . 
F 5 HOH A 117 617 788 HOH HOH . 
F 5 HOH A 118 618 714 HOH HOH . 
F 5 HOH A 119 619 661 HOH HOH . 
F 5 HOH A 120 620 713 HOH HOH . 
F 5 HOH A 121 621 701 HOH HOH . 
F 5 HOH A 122 622 731 HOH HOH . 
F 5 HOH A 123 623 776 HOH HOH . 
F 5 HOH A 124 624 806 HOH HOH . 
F 5 HOH A 125 625 615 HOH HOH . 
F 5 HOH A 126 626 665 HOH HOH . 
F 5 HOH A 127 627 625 HOH HOH . 
F 5 HOH A 128 628 629 HOH HOH . 
F 5 HOH A 129 629 801 HOH HOH . 
F 5 HOH A 130 630 832 HOH HOH . 
F 5 HOH A 131 631 779 HOH HOH . 
F 5 HOH A 132 632 667 HOH HOH . 
F 5 HOH A 133 633 602 HOH HOH . 
F 5 HOH A 134 634 623 HOH HOH . 
F 5 HOH A 135 635 698 HOH HOH . 
F 5 HOH A 136 636 669 HOH HOH . 
F 5 HOH A 137 637 649 HOH HOH . 
F 5 HOH A 138 638 683 HOH HOH . 
F 5 HOH A 139 639 743 HOH HOH . 
F 5 HOH A 140 640 641 HOH HOH . 
F 5 HOH A 141 641 694 HOH HOH . 
F 5 HOH A 142 642 605 HOH HOH . 
F 5 HOH A 143 643 751 HOH HOH . 
F 5 HOH A 144 644 637 HOH HOH . 
F 5 HOH A 145 645 673 HOH HOH . 
F 5 HOH A 146 646 807 HOH HOH . 
F 5 HOH A 147 647 679 HOH HOH . 
F 5 HOH A 148 648 784 HOH HOH . 
F 5 HOH A 149 649 642 HOH HOH . 
F 5 HOH A 150 650 746 HOH HOH . 
F 5 HOH A 151 651 708 HOH HOH . 
F 5 HOH A 152 652 781 HOH HOH . 
F 5 HOH A 153 653 608 HOH HOH . 
F 5 HOH A 154 654 636 HOH HOH . 
F 5 HOH A 155 655 619 HOH HOH . 
F 5 HOH A 156 656 676 HOH HOH . 
F 5 HOH A 157 657 663 HOH HOH . 
F 5 HOH A 158 658 756 HOH HOH . 
F 5 HOH A 159 659 833 HOH HOH . 
F 5 HOH A 160 660 787 HOH HOH . 
F 5 HOH A 161 661 799 HOH HOH . 
F 5 HOH A 162 662 772 HOH HOH . 
F 5 HOH A 163 663 635 HOH HOH . 
F 5 HOH A 164 664 628 HOH HOH . 
F 5 HOH A 165 665 741 HOH HOH . 
F 5 HOH A 166 666 722 HOH HOH . 
F 5 HOH A 167 667 633 HOH HOH . 
F 5 HOH A 168 668 795 HOH HOH . 
F 5 HOH A 169 669 766 HOH HOH . 
F 5 HOH A 170 670 662 HOH HOH . 
F 5 HOH A 171 671 702 HOH HOH . 
F 5 HOH A 172 672 773 HOH HOH . 
F 5 HOH A 173 673 659 HOH HOH . 
F 5 HOH A 174 674 753 HOH HOH . 
F 5 HOH A 175 675 685 HOH HOH . 
F 5 HOH A 176 676 677 HOH HOH . 
F 5 HOH A 177 677 697 HOH HOH . 
F 5 HOH A 178 678 656 HOH HOH . 
F 5 HOH A 179 679 674 HOH HOH . 
F 5 HOH A 180 680 734 HOH HOH . 
F 5 HOH A 181 681 651 HOH HOH . 
F 5 HOH A 182 682 672 HOH HOH . 
F 5 HOH A 183 683 780 HOH HOH . 
F 5 HOH A 184 684 696 HOH HOH . 
F 5 HOH A 185 685 829 HOH HOH . 
F 5 HOH A 186 686 815 HOH HOH . 
F 5 HOH A 187 687 785 HOH HOH . 
F 5 HOH A 188 688 803 HOH HOH . 
F 5 HOH A 189 689 622 HOH HOH . 
F 5 HOH A 190 690 705 HOH HOH . 
F 5 HOH A 191 691 639 HOH HOH . 
F 5 HOH A 192 692 744 HOH HOH . 
F 5 HOH A 193 693 822 HOH HOH . 
F 5 HOH A 194 694 752 HOH HOH . 
F 5 HOH A 195 695 690 HOH HOH . 
F 5 HOH A 196 696 783 HOH HOH . 
F 5 HOH A 197 697 837 HOH HOH . 
F 5 HOH A 198 698 800 HOH HOH . 
F 5 HOH A 199 699 750 HOH HOH . 
F 5 HOH A 200 700 769 HOH HOH . 
F 5 HOH A 201 701 761 HOH HOH . 
F 5 HOH A 202 702 730 HOH HOH . 
F 5 HOH A 203 703 782 HOH HOH . 
F 5 HOH A 204 704 755 HOH HOH . 
F 5 HOH A 205 705 759 HOH HOH . 
F 5 HOH A 206 706 808 HOH HOH . 
F 5 HOH A 207 707 687 HOH HOH . 
F 5 HOH A 208 708 700 HOH HOH . 
F 5 HOH A 209 709 631 HOH HOH . 
F 5 HOH A 210 710 653 HOH HOH . 
F 5 HOH A 211 711 765 HOH HOH . 
F 5 HOH A 212 712 736 HOH HOH . 
F 5 HOH A 213 713 758 HOH HOH . 
F 5 HOH A 214 714 791 HOH HOH . 
F 5 HOH A 215 715 824 HOH HOH . 
F 5 HOH A 216 716 640 HOH HOH . 
F 5 HOH A 217 717 748 HOH HOH . 
F 5 HOH A 218 718 814 HOH HOH . 
F 5 HOH A 219 719 726 HOH HOH . 
F 5 HOH A 220 720 693 HOH HOH . 
F 5 HOH A 221 721 816 HOH HOH . 
F 5 HOH A 222 722 645 HOH HOH . 
F 5 HOH A 223 723 792 HOH HOH . 
F 5 HOH A 224 724 757 HOH HOH . 
F 5 HOH A 225 725 720 HOH HOH . 
F 5 HOH A 226 726 805 HOH HOH . 
F 5 HOH A 227 727 823 HOH HOH . 
F 5 HOH A 228 728 732 HOH HOH . 
F 5 HOH A 229 729 721 HOH HOH . 
F 5 HOH A 230 730 826 HOH HOH . 
F 5 HOH A 231 731 817 HOH HOH . 
F 5 HOH A 232 732 793 HOH HOH . 
F 5 HOH A 233 733 821 HOH HOH . 
F 5 HOH A 234 734 827 HOH HOH . 
F 5 HOH A 235 735 825 HOH HOH . 
F 5 HOH A 236 736 728 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 24.087 94.648 23.775 1 40.18 ? C1 GOL 403 A 1 
HETATM 2 O O1 GOL . . . D 4 23.09 95.639 23.559 1 33.64 ? O1 GOL 403 A 1 
HETATM 3 C C2 GOL . . . D 4 25.448 95.242 23.547 1 42.71 ? C2 GOL 403 A 1 
HETATM 4 O O2 GOL . . . D 4 25.51 95.654 22.175 1 42.36 ? O2 GOL 403 A 1 
HETATM 5 C C3 GOL . . . D 4 25.72 96.396 24.5 1 40.97 ? C3 GOL 403 A 1 
HETATM 6 O O3 GOL . . . D 4 24.814 96.414 25.604 1 34.72 ? O3 GOL 403 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           61 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           395 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#