data_6RA1 # _model_server_result.job_id 5Nlu3RmPPdd8ssFOqYiPnQ _model_server_result.datetime_utc '2024-11-08 09:44:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ra1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6RA1 # _exptl.entry_id 6RA1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 248.278 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 14-ethyl-4,6-dioxa-10,14-diazatricyclo[7.6.0.0^{3,7}]pentadeca-1(9),2,7-trien-13-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RA1 _cell.length_a 56.889 _cell.length_b 56.889 _cell.length_c 116.147 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RA1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H16 N2 O3' _chem_comp.formula_weight 248.278 _chem_comp.id JVQ _chem_comp.mon_nstd_flag . _chem_comp.name 14-ethyl-4,6-dioxa-10,14-diazatricyclo[7.6.0.0^{3,7}]pentadeca-1(9),2,7-trien-13-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O8 C7 JVQ sing 173 n n O8 C9 JVQ sing 174 n n C6 C7 JVQ doub 175 n y C6 C5 JVQ sing 176 n y C7 C11 JVQ sing 177 n y C9 O10 JVQ sing 178 n n C4 C5 JVQ sing 179 n n C4 N3 JVQ sing 180 n n C5 C13 JVQ doub 181 n y C2 N3 JVQ sing 182 n n C2 C1 JVQ sing 183 n n N3 C17 JVQ sing 184 n n C11 O10 JVQ sing 185 n n C11 C12 JVQ doub 186 n y C13 C12 JVQ sing 187 n y C13 N14 JVQ sing 188 n n C17 C16 JVQ sing 189 n n C17 O18 JVQ doub 190 n n C16 C15 JVQ sing 191 n n C15 N14 JVQ sing 192 n n C1 H1 JVQ sing 193 n n C1 H2 JVQ sing 194 n n C1 H3 JVQ sing 195 n n C2 H4 JVQ sing 196 n n C2 H5 JVQ sing 197 n n C4 H6 JVQ sing 198 n n C4 H7 JVQ sing 199 n n C6 H8 JVQ sing 200 n n C12 H9 JVQ sing 201 n n C15 H10 JVQ sing 202 n n C15 H11 JVQ sing 203 n n C16 H12 JVQ sing 204 n n C16 H13 JVQ sing 205 n n C9 H14 JVQ sing 206 n n C9 H15 JVQ sing 207 n n N14 H16 JVQ sing 208 n n # _atom_sites.entry_id 6RA1 _atom_sites.fract_transf_matrix[1][1] 0.017578 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017578 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00861 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JWB A 1 301 1 JWB INX . C 3 JVQ A 1 302 1 JVQ INY . D 4 PEG A 1 303 1 PEG PEG . E 5 PG4 A 1 304 2 PG4 PG4 . F 6 SO4 A 1 305 3 SO4 SO4 . G 6 SO4 A 1 306 4 SO4 SO4 . H 7 HOH A 1 401 55 HOH HOH . H 7 HOH A 2 402 7 HOH HOH . H 7 HOH A 3 403 5 HOH HOH . H 7 HOH A 4 404 15 HOH HOH . H 7 HOH A 5 405 27 HOH HOH . H 7 HOH A 6 406 4 HOH HOH . H 7 HOH A 7 407 66 HOH HOH . H 7 HOH A 8 408 69 HOH HOH . H 7 HOH A 9 409 40 HOH HOH . H 7 HOH A 10 410 41 HOH HOH . H 7 HOH A 11 411 68 HOH HOH . H 7 HOH A 12 412 8 HOH HOH . H 7 HOH A 13 413 44 HOH HOH . H 7 HOH A 14 414 51 HOH HOH . H 7 HOH A 15 415 78 HOH HOH . H 7 HOH A 16 416 25 HOH HOH . H 7 HOH A 17 417 12 HOH HOH . H 7 HOH A 18 418 34 HOH HOH . H 7 HOH A 19 419 10 HOH HOH . H 7 HOH A 20 420 67 HOH HOH . H 7 HOH A 21 421 72 HOH HOH . H 7 HOH A 22 422 59 HOH HOH . H 7 HOH A 23 423 54 HOH HOH . H 7 HOH A 24 424 52 HOH HOH . H 7 HOH A 25 425 49 HOH HOH . H 7 HOH A 26 426 35 HOH HOH . H 7 HOH A 27 427 20 HOH HOH . H 7 HOH A 28 428 50 HOH HOH . H 7 HOH A 29 429 2 HOH HOH . H 7 HOH A 30 430 13 HOH HOH . H 7 HOH A 31 431 3 HOH HOH . H 7 HOH A 32 432 64 HOH HOH . H 7 HOH A 33 433 26 HOH HOH . H 7 HOH A 34 434 9 HOH HOH . H 7 HOH A 35 435 21 HOH HOH . H 7 HOH A 36 436 70 HOH HOH . H 7 HOH A 37 437 30 HOH HOH . H 7 HOH A 38 438 37 HOH HOH . H 7 HOH A 39 439 38 HOH HOH . H 7 HOH A 40 440 73 HOH HOH . H 7 HOH A 41 441 16 HOH HOH . H 7 HOH A 42 442 65 HOH HOH . H 7 HOH A 43 443 33 HOH HOH . H 7 HOH A 44 444 63 HOH HOH . H 7 HOH A 45 445 48 HOH HOH . H 7 HOH A 46 446 31 HOH HOH . H 7 HOH A 47 447 18 HOH HOH . H 7 HOH A 48 448 14 HOH HOH . H 7 HOH A 49 449 76 HOH HOH . H 7 HOH A 50 450 28 HOH HOH . H 7 HOH A 51 451 61 HOH HOH . H 7 HOH A 52 452 71 HOH HOH . H 7 HOH A 53 453 24 HOH HOH . H 7 HOH A 54 454 22 HOH HOH . H 7 HOH A 55 455 17 HOH HOH . H 7 HOH A 56 456 6 HOH HOH . H 7 HOH A 57 457 1 HOH HOH . H 7 HOH A 58 458 11 HOH HOH . H 7 HOH A 59 459 19 HOH HOH . H 7 HOH A 60 460 39 HOH HOH . H 7 HOH A 61 461 80 HOH HOH . H 7 HOH A 62 462 29 HOH HOH . H 7 HOH A 63 463 42 HOH HOH . H 7 HOH A 64 464 36 HOH HOH . H 7 HOH A 65 465 58 HOH HOH . H 7 HOH A 66 466 23 HOH HOH . H 7 HOH A 67 467 81 HOH HOH . H 7 HOH A 68 468 46 HOH HOH . H 7 HOH A 69 469 77 HOH HOH . H 7 HOH A 70 470 74 HOH HOH . H 7 HOH A 71 471 57 HOH HOH . H 7 HOH A 72 472 75 HOH HOH . H 7 HOH A 73 473 45 HOH HOH . H 7 HOH A 74 474 56 HOH HOH . H 7 HOH A 75 475 32 HOH HOH . H 7 HOH A 76 476 62 HOH HOH . H 7 HOH A 77 477 53 HOH HOH . H 7 HOH A 78 478 43 HOH HOH . H 7 HOH A 79 479 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JVQ . . . C 3 -7.015 7.257 -22.967 1 27.05 ? C1 JVQ 302 A 1 HETATM 2 C C2 JVQ . . . C 3 -8.165 7.631 -23.919 1 29.38 ? C2 JVQ 302 A 1 HETATM 3 C C4 JVQ . . . C 3 -9.645 5.717 -24.628 1 26.3 ? C4 JVQ 302 A 1 HETATM 4 C C5 JVQ . . . C 3 -8.828 4.511 -24.226 1 25.98 ? C5 JVQ 302 A 1 HETATM 5 C C6 JVQ . . . C 3 -7.939 4.031 -25.181 1 24.96 ? C6 JVQ 302 A 1 HETATM 6 C C7 JVQ . . . C 3 -7.11 2.951 -24.892 1 23.8 ? C7 JVQ 302 A 1 HETATM 7 C C11 JVQ . . . C 3 -7.165 2.334 -23.639 1 26.7 ? C11 JVQ 302 A 1 HETATM 8 C C12 JVQ . . . C 3 -8.055 2.809 -22.668 1 25.83 ? C12 JVQ 302 A 1 HETATM 9 C C15 JVQ . . . C 3 -11.128 4.693 -22.01 1 27.7 ? C15 JVQ 302 A 1 HETATM 10 C C16 JVQ . . . C 3 -11.416 6.168 -22.336 1 28.63 ? C16 JVQ 302 A 1 HETATM 11 C C17 JVQ . . . C 3 -10.183 7.02 -22.59 1 30.33 ? C17 JVQ 302 A 1 HETATM 12 N N3 JVQ . . . C 3 -9.37 6.803 -23.673 1 29.03 ? N3 JVQ 302 A 1 HETATM 13 O O8 JVQ . . . C 3 -6.215 2.298 -25.672 1 23.88 ? O8 JVQ 302 A 1 HETATM 14 C C9 JVQ . . . C 3 -5.511 1.362 -24.831 1 25.38 ? C9 JVQ 302 A 1 HETATM 15 O O10 JVQ . . . C 3 -6.293 1.278 -23.63 1 25.96 ? O10 JVQ 302 A 1 HETATM 16 C C13 JVQ . . . C 3 -8.883 3.906 -22.945 1 27.2 ? C13 JVQ 302 A 1 HETATM 17 N N14 JVQ . . . C 3 -9.697 4.38 -21.888 1 28.19 ? N14 JVQ 302 A 1 HETATM 18 O O18 JVQ . . . C 3 -9.927 7.91 -21.781 1 30.77 ? O18 JVQ 302 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #