data_6RB0
#
_model_server_result.job_id            BIIY-QwujLuP7ILyO950wQ 
_model_server_result.datetime_utc      '2024-11-15 00:34:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6rb0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":402}' 
#
_entry.id    6RB0 
#
_exptl.entry_id    6RB0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6RB0 
_cell.length_a            83.077 
_cell.length_b            86.09 
_cell.length_c            97.611 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RB0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 175 A SER 161 1_555 E P MHH . A MHH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.628 ? 
covale ? covale2 A OG SER 225 A SER 211 1_555 F P MHH . A MHH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.681 ? 
covale ? covale3 B OG SER 175 B SER 161 1_555 J P MHH . B MHH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.637 ? 
covale ? covale4 B OG SER 225 B SER 211 1_555 K P MHH . B MHH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.671 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6RB0 
_atom_sites.fract_transf_matrix[1][1]    0.012037 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011616 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010245 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 401 401 GOL GOL . 
D 2 GOL A 1 402 402 GOL GOL . 
E 3 MHH A 1 403 161 MHH 120 . 
F 3 MHH A 1 404 211 MHH 120 . 
G 2 GOL B 1 401 401 GOL GOL . 
H 2 GOL B 1 402 402 GOL GOL . 
I 2 GOL B 1 403 403 GOL GOL . 
J 3 MHH B 1 404 161 MHH 120 . 
K 3 MHH B 1 405 211 MHH 120 . 
L 4 HOH A 1 501 144 HOH HOH . 
L 4 HOH A 2 502 142 HOH HOH . 
L 4 HOH A 3 503 70 HOH HOH . 
L 4 HOH A 4 504 17 HOH HOH . 
L 4 HOH A 5 505 4 HOH HOH . 
L 4 HOH A 6 506 6 HOH HOH . 
L 4 HOH A 7 507 43 HOH HOH . 
L 4 HOH A 8 508 72 HOH HOH . 
L 4 HOH A 9 509 89 HOH HOH . 
L 4 HOH A 10 510 80 HOH HOH . 
L 4 HOH A 11 511 103 HOH HOH . 
L 4 HOH A 12 512 34 HOH HOH . 
L 4 HOH A 13 513 81 HOH HOH . 
L 4 HOH A 14 514 97 HOH HOH . 
L 4 HOH A 15 515 9 HOH HOH . 
L 4 HOH A 16 516 19 HOH HOH . 
L 4 HOH A 17 517 102 HOH HOH . 
L 4 HOH A 18 518 28 HOH HOH . 
L 4 HOH A 19 519 2 HOH HOH . 
L 4 HOH A 20 520 88 HOH HOH . 
L 4 HOH A 21 521 79 HOH HOH . 
L 4 HOH A 22 522 82 HOH HOH . 
L 4 HOH A 23 523 93 HOH HOH . 
L 4 HOH A 24 524 30 HOH HOH . 
L 4 HOH A 25 525 29 HOH HOH . 
L 4 HOH A 26 526 63 HOH HOH . 
L 4 HOH A 27 527 54 HOH HOH . 
L 4 HOH A 28 528 7 HOH HOH . 
L 4 HOH A 29 529 153 HOH HOH . 
L 4 HOH A 30 530 87 HOH HOH . 
L 4 HOH A 31 531 49 HOH HOH . 
L 4 HOH A 32 532 76 HOH HOH . 
L 4 HOH A 33 533 50 HOH HOH . 
L 4 HOH A 34 534 77 HOH HOH . 
L 4 HOH A 35 535 159 HOH HOH . 
L 4 HOH A 36 536 158 HOH HOH . 
L 4 HOH A 37 537 26 HOH HOH . 
L 4 HOH A 38 538 84 HOH HOH . 
L 4 HOH A 39 539 12 HOH HOH . 
L 4 HOH A 40 540 94 HOH HOH . 
L 4 HOH A 41 541 58 HOH HOH . 
L 4 HOH A 42 542 62 HOH HOH . 
L 4 HOH A 43 543 37 HOH HOH . 
L 4 HOH A 44 544 35 HOH HOH . 
L 4 HOH A 45 545 15 HOH HOH . 
L 4 HOH A 46 546 27 HOH HOH . 
L 4 HOH A 47 547 53 HOH HOH . 
L 4 HOH A 48 548 64 HOH HOH . 
L 4 HOH A 49 549 145 HOH HOH . 
L 4 HOH A 50 550 67 HOH HOH . 
L 4 HOH A 51 551 75 HOH HOH . 
L 4 HOH A 52 552 10 HOH HOH . 
L 4 HOH A 53 553 92 HOH HOH . 
L 4 HOH A 54 554 68 HOH HOH . 
L 4 HOH A 55 555 151 HOH HOH . 
L 4 HOH A 56 556 85 HOH HOH . 
L 4 HOH A 57 557 33 HOH HOH . 
L 4 HOH A 58 558 61 HOH HOH . 
L 4 HOH A 59 559 71 HOH HOH . 
L 4 HOH A 60 560 83 HOH HOH . 
L 4 HOH A 61 561 55 HOH HOH . 
L 4 HOH A 62 562 60 HOH HOH . 
L 4 HOH A 63 563 13 HOH HOH . 
L 4 HOH A 64 564 59 HOH HOH . 
L 4 HOH A 65 565 156 HOH HOH . 
L 4 HOH A 66 566 56 HOH HOH . 
L 4 HOH A 67 567 39 HOH HOH . 
L 4 HOH A 68 568 152 HOH HOH . 
L 4 HOH A 69 569 78 HOH HOH . 
L 4 HOH A 70 570 154 HOH HOH . 
L 4 HOH A 71 571 96 HOH HOH . 
L 4 HOH A 72 572 57 HOH HOH . 
L 4 HOH A 73 573 42 HOH HOH . 
L 4 HOH A 74 574 148 HOH HOH . 
L 4 HOH A 75 575 146 HOH HOH . 
L 4 HOH A 76 576 52 HOH HOH . 
L 4 HOH A 77 577 65 HOH HOH . 
L 4 HOH A 78 578 86 HOH HOH . 
L 4 HOH A 79 579 69 HOH HOH . 
L 4 HOH A 80 580 90 HOH HOH . 
L 4 HOH A 81 581 66 HOH HOH . 
L 4 HOH A 82 582 155 HOH HOH . 
L 4 HOH A 83 583 143 HOH HOH . 
L 4 HOH A 84 584 51 HOH HOH . 
M 4 HOH B 1 501 128 HOH HOH . 
M 4 HOH B 2 502 123 HOH HOH . 
M 4 HOH B 3 503 116 HOH HOH . 
M 4 HOH B 4 504 5 HOH HOH . 
M 4 HOH B 5 505 126 HOH HOH . 
M 4 HOH B 6 506 16 HOH HOH . 
M 4 HOH B 7 507 46 HOH HOH . 
M 4 HOH B 8 508 131 HOH HOH . 
M 4 HOH B 9 509 38 HOH HOH . 
M 4 HOH B 10 510 104 HOH HOH . 
M 4 HOH B 11 511 14 HOH HOH . 
M 4 HOH B 12 512 138 HOH HOH . 
M 4 HOH B 13 513 25 HOH HOH . 
M 4 HOH B 14 514 31 HOH HOH . 
M 4 HOH B 15 515 23 HOH HOH . 
M 4 HOH B 16 516 114 HOH HOH . 
M 4 HOH B 17 517 101 HOH HOH . 
M 4 HOH B 18 518 137 HOH HOH . 
M 4 HOH B 19 519 136 HOH HOH . 
M 4 HOH B 20 520 120 HOH HOH . 
M 4 HOH B 21 521 3 HOH HOH . 
M 4 HOH B 22 522 48 HOH HOH . 
M 4 HOH B 23 523 22 HOH HOH . 
M 4 HOH B 24 524 95 HOH HOH . 
M 4 HOH B 25 525 106 HOH HOH . 
M 4 HOH B 26 526 21 HOH HOH . 
M 4 HOH B 27 527 112 HOH HOH . 
M 4 HOH B 28 528 119 HOH HOH . 
M 4 HOH B 29 529 135 HOH HOH . 
M 4 HOH B 30 530 32 HOH HOH . 
M 4 HOH B 31 531 110 HOH HOH . 
M 4 HOH B 32 532 113 HOH HOH . 
M 4 HOH B 33 533 161 HOH HOH . 
M 4 HOH B 34 534 20 HOH HOH . 
M 4 HOH B 35 535 8 HOH HOH . 
M 4 HOH B 36 536 117 HOH HOH . 
M 4 HOH B 37 537 124 HOH HOH . 
M 4 HOH B 38 538 139 HOH HOH . 
M 4 HOH B 39 539 24 HOH HOH . 
M 4 HOH B 40 540 149 HOH HOH . 
M 4 HOH B 41 541 129 HOH HOH . 
M 4 HOH B 42 542 132 HOH HOH . 
M 4 HOH B 43 543 1 HOH HOH . 
M 4 HOH B 44 544 157 HOH HOH . 
M 4 HOH B 45 545 111 HOH HOH . 
M 4 HOH B 46 546 47 HOH HOH . 
M 4 HOH B 47 547 118 HOH HOH . 
M 4 HOH B 48 548 74 HOH HOH . 
M 4 HOH B 49 549 11 HOH HOH . 
M 4 HOH B 50 550 73 HOH HOH . 
M 4 HOH B 51 551 133 HOH HOH . 
M 4 HOH B 52 552 41 HOH HOH . 
M 4 HOH B 53 553 122 HOH HOH . 
M 4 HOH B 54 554 18 HOH HOH . 
M 4 HOH B 55 555 91 HOH HOH . 
M 4 HOH B 56 556 130 HOH HOH . 
M 4 HOH B 57 557 108 HOH HOH . 
M 4 HOH B 58 558 162 HOH HOH . 
M 4 HOH B 59 559 98 HOH HOH . 
M 4 HOH B 60 560 125 HOH HOH . 
M 4 HOH B 61 561 36 HOH HOH . 
M 4 HOH B 62 562 160 HOH HOH . 
M 4 HOH B 63 563 99 HOH HOH . 
M 4 HOH B 64 564 147 HOH HOH . 
M 4 HOH B 65 565 115 HOH HOH . 
M 4 HOH B 66 566 141 HOH HOH . 
M 4 HOH B 67 567 121 HOH HOH . 
M 4 HOH B 68 568 40 HOH HOH . 
M 4 HOH B 69 569 134 HOH HOH . 
M 4 HOH B 70 570 44 HOH HOH . 
M 4 HOH B 71 571 127 HOH HOH . 
M 4 HOH B 72 572 109 HOH HOH . 
M 4 HOH B 73 573 107 HOH HOH . 
M 4 HOH B 74 574 140 HOH HOH . 
M 4 HOH B 75 575 100 HOH HOH . 
M 4 HOH B 76 576 105 HOH HOH . 
M 4 HOH B 77 577 150 HOH HOH . 
M 4 HOH B 78 578 45 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 2 -26.457 -24.199 2.904 1 58.98 ? C1 GOL 402 B 1 
HETATM 2 O O1 GOL . . . H 2 -27.783 -24.07 2.396 1 57.29 ? O1 GOL 402 B 1 
HETATM 3 C C2 GOL . . . H 2 -25.698 -22.889 2.841 1 58.74 ? C2 GOL 402 B 1 
HETATM 4 O O2 GOL . . . H 2 -25.2 -22.678 1.52 1 57.53 ? O2 GOL 402 B 1 
HETATM 5 C C3 GOL . . . H 2 -26.527 -21.697 3.277 1 57.95 ? C3 GOL 402 B 1 
HETATM 6 O O3 GOL . . . H 2 -27.399 -21.237 2.247 1 56.16 ? O3 GOL 402 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           551 
_model_server_stats.encode_time_ms          46 
_model_server_stats.element_count           6 
#