data_6RB1 # _model_server_result.job_id Cvr9mXvfEUqEVVx-NxHBuw _model_server_result.datetime_utc '2024-11-14 23:28:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 6RB1 # _exptl.entry_id 6RB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.94 _cell.angle_gamma 90 _cell.entry_id 6RB1 _cell.length_a 58.125 _cell.length_b 46.455 _cell.length_c 62.949 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6RB1 _atom_sites.fract_transf_matrix[1][1] 0.017204 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006931 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021526 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017127 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 1 SO4 SO4 . C 2 SO4 A 1 402 2 SO4 SO4 . D 2 SO4 A 1 403 3 SO4 SO4 . E 3 EDO A 1 404 4 EDO EDO . F 3 EDO A 1 405 5 EDO EDO . G 4 JWQ A 1 406 1 JWQ SR1 . H 5 HOH A 1 501 149 HOH HOH . H 5 HOH A 2 502 275 HOH HOH . H 5 HOH A 3 503 218 HOH HOH . H 5 HOH A 4 504 272 HOH HOH . H 5 HOH A 5 505 130 HOH HOH . H 5 HOH A 6 506 303 HOH HOH . H 5 HOH A 7 507 255 HOH HOH . H 5 HOH A 8 508 94 HOH HOH . H 5 HOH A 9 509 270 HOH HOH . H 5 HOH A 10 510 177 HOH HOH . H 5 HOH A 11 511 239 HOH HOH . H 5 HOH A 12 512 59 HOH HOH . H 5 HOH A 13 513 157 HOH HOH . H 5 HOH A 14 514 165 HOH HOH . H 5 HOH A 15 515 204 HOH HOH . H 5 HOH A 16 516 263 HOH HOH . H 5 HOH A 17 517 304 HOH HOH . H 5 HOH A 18 518 65 HOH HOH . H 5 HOH A 19 519 72 HOH HOH . H 5 HOH A 20 520 98 HOH HOH . H 5 HOH A 21 521 202 HOH HOH . H 5 HOH A 22 522 318 HOH HOH . H 5 HOH A 23 523 132 HOH HOH . H 5 HOH A 24 524 174 HOH HOH . H 5 HOH A 25 525 75 HOH HOH . H 5 HOH A 26 526 48 HOH HOH . H 5 HOH A 27 527 254 HOH HOH . H 5 HOH A 28 528 244 HOH HOH . H 5 HOH A 29 529 146 HOH HOH . H 5 HOH A 30 530 97 HOH HOH . H 5 HOH A 31 531 73 HOH HOH . H 5 HOH A 32 532 114 HOH HOH . H 5 HOH A 33 533 4 HOH HOH . H 5 HOH A 34 534 64 HOH HOH . H 5 HOH A 35 535 9 HOH HOH . H 5 HOH A 36 536 11 HOH HOH . H 5 HOH A 37 537 34 HOH HOH . H 5 HOH A 38 538 87 HOH HOH . H 5 HOH A 39 539 74 HOH HOH . H 5 HOH A 40 540 131 HOH HOH . H 5 HOH A 41 541 24 HOH HOH . H 5 HOH A 42 542 25 HOH HOH . H 5 HOH A 43 543 297 HOH HOH . H 5 HOH A 44 544 104 HOH HOH . H 5 HOH A 45 545 95 HOH HOH . H 5 HOH A 46 546 60 HOH HOH . H 5 HOH A 47 547 32 HOH HOH . H 5 HOH A 48 548 181 HOH HOH . H 5 HOH A 49 549 120 HOH HOH . H 5 HOH A 50 550 31 HOH HOH . H 5 HOH A 51 551 141 HOH HOH . H 5 HOH A 52 552 61 HOH HOH . H 5 HOH A 53 553 142 HOH HOH . H 5 HOH A 54 554 106 HOH HOH . H 5 HOH A 55 555 10 HOH HOH . H 5 HOH A 56 556 296 HOH HOH . H 5 HOH A 57 557 137 HOH HOH . H 5 HOH A 58 558 242 HOH HOH . H 5 HOH A 59 559 56 HOH HOH . H 5 HOH A 60 560 42 HOH HOH . H 5 HOH A 61 561 36 HOH HOH . H 5 HOH A 62 562 194 HOH HOH . H 5 HOH A 63 563 69 HOH HOH . H 5 HOH A 64 564 184 HOH HOH . H 5 HOH A 65 565 80 HOH HOH . H 5 HOH A 66 566 84 HOH HOH . H 5 HOH A 67 567 21 HOH HOH . H 5 HOH A 68 568 116 HOH HOH . H 5 HOH A 69 569 256 HOH HOH . H 5 HOH A 70 570 17 HOH HOH . H 5 HOH A 71 571 189 HOH HOH . H 5 HOH A 72 572 105 HOH HOH . H 5 HOH A 73 573 111 HOH HOH . H 5 HOH A 74 574 29 HOH HOH . H 5 HOH A 75 575 33 HOH HOH . H 5 HOH A 76 576 144 HOH HOH . H 5 HOH A 77 577 248 HOH HOH . H 5 HOH A 78 578 35 HOH HOH . H 5 HOH A 79 579 171 HOH HOH . H 5 HOH A 80 580 43 HOH HOH . H 5 HOH A 81 581 168 HOH HOH . H 5 HOH A 82 582 150 HOH HOH . H 5 HOH A 83 583 81 HOH HOH . H 5 HOH A 84 584 294 HOH HOH . H 5 HOH A 85 585 20 HOH HOH . H 5 HOH A 86 586 119 HOH HOH . H 5 HOH A 87 587 53 HOH HOH . H 5 HOH A 88 588 193 HOH HOH . H 5 HOH A 89 589 26 HOH HOH . H 5 HOH A 90 590 47 HOH HOH . H 5 HOH A 91 591 164 HOH HOH . H 5 HOH A 92 592 50 HOH HOH . H 5 HOH A 93 593 99 HOH HOH . H 5 HOH A 94 594 227 HOH HOH . H 5 HOH A 95 595 38 HOH HOH . H 5 HOH A 96 596 16 HOH HOH . H 5 HOH A 97 597 15 HOH HOH . H 5 HOH A 98 598 49 HOH HOH . H 5 HOH A 99 599 186 HOH HOH . H 5 HOH A 100 600 145 HOH HOH . H 5 HOH A 101 601 206 HOH HOH . H 5 HOH A 102 602 90 HOH HOH . H 5 HOH A 103 603 40 HOH HOH . H 5 HOH A 104 604 261 HOH HOH . H 5 HOH A 105 605 126 HOH HOH . H 5 HOH A 106 606 68 HOH HOH . H 5 HOH A 107 607 3 HOH HOH . H 5 HOH A 108 608 192 HOH HOH . H 5 HOH A 109 609 30 HOH HOH . H 5 HOH A 110 610 219 HOH HOH . H 5 HOH A 111 611 167 HOH HOH . H 5 HOH A 112 612 78 HOH HOH . H 5 HOH A 113 613 121 HOH HOH . H 5 HOH A 114 614 93 HOH HOH . H 5 HOH A 115 615 210 HOH HOH . H 5 HOH A 116 616 115 HOH HOH . H 5 HOH A 117 617 86 HOH HOH . H 5 HOH A 118 618 140 HOH HOH . H 5 HOH A 119 619 283 HOH HOH . H 5 HOH A 120 620 2 HOH HOH . H 5 HOH A 121 621 101 HOH HOH . H 5 HOH A 122 622 229 HOH HOH . H 5 HOH A 123 623 128 HOH HOH . H 5 HOH A 124 624 92 HOH HOH . H 5 HOH A 125 625 217 HOH HOH . H 5 HOH A 126 626 160 HOH HOH . H 5 HOH A 127 627 62 HOH HOH . H 5 HOH A 128 628 89 HOH HOH . H 5 HOH A 129 629 19 HOH HOH . H 5 HOH A 130 630 190 HOH HOH . H 5 HOH A 131 631 5 HOH HOH . H 5 HOH A 132 632 305 HOH HOH . H 5 HOH A 133 633 112 HOH HOH . H 5 HOH A 134 634 113 HOH HOH . H 5 HOH A 135 635 45 HOH HOH . H 5 HOH A 136 636 12 HOH HOH . H 5 HOH A 137 637 14 HOH HOH . H 5 HOH A 138 638 52 HOH HOH . H 5 HOH A 139 639 7 HOH HOH . H 5 HOH A 140 640 8 HOH HOH . H 5 HOH A 141 641 1 HOH HOH . H 5 HOH A 142 642 207 HOH HOH . H 5 HOH A 143 643 260 HOH HOH . H 5 HOH A 144 644 22 HOH HOH . H 5 HOH A 145 645 147 HOH HOH . H 5 HOH A 146 646 79 HOH HOH . H 5 HOH A 147 647 249 HOH HOH . H 5 HOH A 148 648 77 HOH HOH . H 5 HOH A 149 649 18 HOH HOH . H 5 HOH A 150 650 230 HOH HOH . H 5 HOH A 151 651 108 HOH HOH . H 5 HOH A 152 652 175 HOH HOH . H 5 HOH A 153 653 148 HOH HOH . H 5 HOH A 154 654 70 HOH HOH . H 5 HOH A 155 655 155 HOH HOH . H 5 HOH A 156 656 191 HOH HOH . H 5 HOH A 157 657 54 HOH HOH . H 5 HOH A 158 658 127 HOH HOH . H 5 HOH A 159 659 28 HOH HOH . H 5 HOH A 160 660 41 HOH HOH . H 5 HOH A 161 661 271 HOH HOH . H 5 HOH A 162 662 23 HOH HOH . H 5 HOH A 163 663 123 HOH HOH . H 5 HOH A 164 664 39 HOH HOH . H 5 HOH A 165 665 110 HOH HOH . H 5 HOH A 166 666 162 HOH HOH . H 5 HOH A 167 667 231 HOH HOH . H 5 HOH A 168 668 139 HOH HOH . H 5 HOH A 169 669 6 HOH HOH . H 5 HOH A 170 670 288 HOH HOH . H 5 HOH A 171 671 197 HOH HOH . H 5 HOH A 172 672 243 HOH HOH . H 5 HOH A 173 673 66 HOH HOH . H 5 HOH A 174 674 154 HOH HOH . H 5 HOH A 175 675 46 HOH HOH . H 5 HOH A 176 676 13 HOH HOH . H 5 HOH A 177 677 185 HOH HOH . H 5 HOH A 178 678 176 HOH HOH . H 5 HOH A 179 679 91 HOH HOH . H 5 HOH A 180 680 240 HOH HOH . H 5 HOH A 181 681 27 HOH HOH . H 5 HOH A 182 682 134 HOH HOH . H 5 HOH A 183 683 100 HOH HOH . H 5 HOH A 184 684 143 HOH HOH . H 5 HOH A 185 685 166 HOH HOH . H 5 HOH A 186 686 58 HOH HOH . H 5 HOH A 187 687 125 HOH HOH . H 5 HOH A 188 688 85 HOH HOH . H 5 HOH A 189 689 245 HOH HOH . H 5 HOH A 190 690 118 HOH HOH . H 5 HOH A 191 691 55 HOH HOH . H 5 HOH A 192 692 153 HOH HOH . H 5 HOH A 193 693 76 HOH HOH . H 5 HOH A 194 694 67 HOH HOH . H 5 HOH A 195 695 226 HOH HOH . H 5 HOH A 196 696 203 HOH HOH . H 5 HOH A 197 697 188 HOH HOH . H 5 HOH A 198 698 314 HOH HOH . H 5 HOH A 199 699 281 HOH HOH . H 5 HOH A 200 700 57 HOH HOH . H 5 HOH A 201 701 133 HOH HOH . H 5 HOH A 202 702 238 HOH HOH . H 5 HOH A 203 703 317 HOH HOH . H 5 HOH A 204 704 259 HOH HOH . H 5 HOH A 205 705 117 HOH HOH . H 5 HOH A 206 706 221 HOH HOH . H 5 HOH A 207 707 51 HOH HOH . H 5 HOH A 208 708 109 HOH HOH . H 5 HOH A 209 709 311 HOH HOH . H 5 HOH A 210 710 103 HOH HOH . H 5 HOH A 211 711 278 HOH HOH . H 5 HOH A 212 712 312 HOH HOH . H 5 HOH A 213 713 158 HOH HOH . H 5 HOH A 214 714 169 HOH HOH . H 5 HOH A 215 715 241 HOH HOH . H 5 HOH A 216 716 262 HOH HOH . H 5 HOH A 217 717 44 HOH HOH . H 5 HOH A 218 718 151 HOH HOH . H 5 HOH A 219 719 199 HOH HOH . H 5 HOH A 220 720 302 HOH HOH . H 5 HOH A 221 721 224 HOH HOH . H 5 HOH A 222 722 306 HOH HOH . H 5 HOH A 223 723 82 HOH HOH . H 5 HOH A 224 724 107 HOH HOH . H 5 HOH A 225 725 88 HOH HOH . H 5 HOH A 226 726 308 HOH HOH . H 5 HOH A 227 727 313 HOH HOH . H 5 HOH A 228 728 170 HOH HOH . H 5 HOH A 229 729 156 HOH HOH . H 5 HOH A 230 730 138 HOH HOH . H 5 HOH A 231 731 179 HOH HOH . H 5 HOH A 232 732 195 HOH HOH . H 5 HOH A 233 733 205 HOH HOH . H 5 HOH A 234 734 269 HOH HOH . H 5 HOH A 235 735 246 HOH HOH . H 5 HOH A 236 736 122 HOH HOH . H 5 HOH A 237 737 284 HOH HOH . H 5 HOH A 238 738 196 HOH HOH . H 5 HOH A 239 739 299 HOH HOH . H 5 HOH A 240 740 307 HOH HOH . H 5 HOH A 241 741 280 HOH HOH . H 5 HOH A 242 742 211 HOH HOH . H 5 HOH A 243 743 173 HOH HOH . H 5 HOH A 244 744 136 HOH HOH . H 5 HOH A 245 745 291 HOH HOH . H 5 HOH A 246 746 274 HOH HOH . H 5 HOH A 247 747 234 HOH HOH . H 5 HOH A 248 748 293 HOH HOH . H 5 HOH A 249 749 220 HOH HOH . H 5 HOH A 250 750 183 HOH HOH . H 5 HOH A 251 751 208 HOH HOH . H 5 HOH A 252 752 247 HOH HOH . H 5 HOH A 253 753 233 HOH HOH . H 5 HOH A 254 754 267 HOH HOH . H 5 HOH A 255 755 292 HOH HOH . H 5 HOH A 256 756 180 HOH HOH . H 5 HOH A 257 757 37 HOH HOH . H 5 HOH A 258 758 285 HOH HOH . H 5 HOH A 259 759 252 HOH HOH . H 5 HOH A 260 760 172 HOH HOH . H 5 HOH A 261 761 236 HOH HOH . H 5 HOH A 262 762 279 HOH HOH . H 5 HOH A 263 763 273 HOH HOH . H 5 HOH A 264 764 159 HOH HOH . H 5 HOH A 265 765 290 HOH HOH . H 5 HOH A 266 766 135 HOH HOH . H 5 HOH A 267 767 201 HOH HOH . H 5 HOH A 268 768 225 HOH HOH . H 5 HOH A 269 769 289 HOH HOH . H 5 HOH A 270 770 316 HOH HOH . H 5 HOH A 271 771 198 HOH HOH . H 5 HOH A 272 772 295 HOH HOH . H 5 HOH A 273 773 268 HOH HOH . H 5 HOH A 274 774 251 HOH HOH . H 5 HOH A 275 775 214 HOH HOH . H 5 HOH A 276 776 209 HOH HOH . H 5 HOH A 277 777 182 HOH HOH . H 5 HOH A 278 778 83 HOH HOH . H 5 HOH A 279 779 212 HOH HOH . H 5 HOH A 280 780 258 HOH HOH . H 5 HOH A 281 781 250 HOH HOH . H 5 HOH A 282 782 213 HOH HOH . H 5 HOH A 283 783 266 HOH HOH . H 5 HOH A 284 784 216 HOH HOH . H 5 HOH A 285 785 235 HOH HOH . H 5 HOH A 286 786 222 HOH HOH . H 5 HOH A 287 787 96 HOH HOH . H 5 HOH A 288 788 265 HOH HOH . H 5 HOH A 289 789 286 HOH HOH . H 5 HOH A 290 790 319 HOH HOH . H 5 HOH A 291 791 129 HOH HOH . H 5 HOH A 292 792 200 HOH HOH . H 5 HOH A 293 793 277 HOH HOH . H 5 HOH A 294 794 187 HOH HOH . H 5 HOH A 295 795 178 HOH HOH . H 5 HOH A 296 796 287 HOH HOH . H 5 HOH A 297 797 315 HOH HOH . H 5 HOH A 298 798 163 HOH HOH . H 5 HOH A 299 799 264 HOH HOH . H 5 HOH A 300 800 102 HOH HOH . H 5 HOH A 301 801 282 HOH HOH . H 5 HOH A 302 802 71 HOH HOH . H 5 HOH A 303 803 298 HOH HOH . H 5 HOH A 304 804 310 HOH HOH . H 5 HOH A 305 805 215 HOH HOH . H 5 HOH A 306 806 124 HOH HOH . H 5 HOH A 307 807 257 HOH HOH . H 5 HOH A 308 808 152 HOH HOH . H 5 HOH A 309 809 253 HOH HOH . H 5 HOH A 310 810 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 3.287 18.678 -25.22 1 25.25 ? C1 EDO 404 A 1 HETATM 2 O O1 EDO . . . E 3 2.697 18.258 -26.457 1 23.42 ? O1 EDO 404 A 1 HETATM 3 C C2 EDO . . . E 3 3.404 20.195 -25.207 1 31.39 ? C2 EDO 404 A 1 HETATM 4 O O2 EDO . . . E 3 4.378 20.596 -26.178 1 34.3 ? O2 EDO 404 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #