data_6RBW # _model_server_result.job_id pAENYtTAWG0VrnbGOsH2Xg _model_server_result.datetime_utc '2024-11-24 21:37:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rbw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6RBW # _exptl.entry_id 6RBW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 311.141 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 9-(4-azidobutyl)-8-bromanyl-purin-6-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RBW _cell.length_a 62.273 _cell.length_b 76.568 _cell.length_c 118.082 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RBW _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 62.273 0 0 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 62.273 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H11 Br N8' _chem_comp.formula_weight 311.141 _chem_comp.id JXB _chem_comp.mon_nstd_flag . _chem_comp.name 9-(4-azidobutyl)-8-bromanyl-purin-6-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N N1 JXB doub 193 n n N1 N2 JXB doub 194 n n N2 C JXB sing 195 n n C C1 JXB sing 196 n n N5 C6 JXB sing 197 n n C1 C2 JXB sing 198 n n C6 N6 JXB doub 199 n y C6 C5 JXB sing 200 n y N6 C7 JXB sing 201 n y N4 C5 JXB sing 202 n y N4 C4 JXB doub 203 n y C5 C8 JXB doub 204 n y C7 N7 JXB doub 205 n y C2 C3 JXB sing 206 n n C4 BR JXB sing 207 n n C4 N3 JXB sing 208 n y C8 N7 JXB sing 209 n y C8 N3 JXB sing 210 n y N3 C3 JXB sing 211 n n C H2 JXB sing 212 n n C H3 JXB sing 213 n n C1 H4 JXB sing 214 n n C1 H5 JXB sing 215 n n C2 H6 JXB sing 216 n n C2 H7 JXB sing 217 n n C3 H8 JXB sing 218 n n C3 H9 JXB sing 219 n n C7 H10 JXB sing 220 n n N5 H11 JXB sing 221 n n N5 H12 JXB sing 222 n n # _atom_sites.entry_id 6RBW _atom_sites.fract_transf_matrix[1][1] 0.016058 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01306 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008469 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 301 265 CIT CIT . C 3 JXB A 1 302 1 JXB B4N . D 4 HOH A 1 401 1 HOH HOH . D 4 HOH A 2 402 3 HOH HOH . D 4 HOH A 3 403 7 HOH HOH . D 4 HOH A 4 404 5 HOH HOH . D 4 HOH A 5 405 8 HOH HOH . D 4 HOH A 6 406 2 HOH HOH . D 4 HOH A 7 407 4 HOH HOH . D 4 HOH A 8 408 9 HOH HOH . D 4 HOH A 9 409 10 HOH HOH . D 4 HOH A 10 410 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N JXB . . . C 3 18.694 5.217 8.079 1 87.53 ? N JXB 302 A 1 HETATM 2 C C JXB . . . C 3 17.867 7.409 10.617 1 87.26 ? C JXB 302 A 1 HETATM 3 C C1 JXB . . . C 3 18.398 8.4 11.634 1 86.78 ? C1 JXB 302 A 1 HETATM 4 C C2 JXB . . . C 3 17.324 8.922 12.575 1 86.25 ? C2 JXB 302 A 1 HETATM 5 C C3 JXB . . . C 3 17.863 9.858 13.646 1 85.43 ? C3 JXB 302 A 1 HETATM 6 C C4 JXB . . . C 3 17.454 12.174 12.672 1 84.14 ? C4 JXB 302 A 1 HETATM 7 C C5 JXB . . . C 3 19.408 12.798 12.164 1 84.81 ? C5 JXB 302 A 1 HETATM 8 C C6 JXB . . . C 3 20.583 13.439 11.726 1 84.36 ? C6 JXB 302 A 1 HETATM 9 C C7 JXB . . . C 3 21.744 11.615 12.555 1 84.27 ? C7 JXB 302 A 1 HETATM 10 C C8 JXB . . . C 3 19.554 11.571 12.78 1 84.71 ? C8 JXB 302 A 1 HETATM 11 N N1 JXB . . . C 3 18.703 5.986 8.927 1 87.49 ? N1 JXB 302 A 1 HETATM 12 N N2 JXB . . . C 3 18.963 6.823 9.817 1 87.48 ? N2 JXB 302 A 1 HETATM 13 N N3 JXB . . . C 3 18.276 11.161 13.111 1 85.08 ? N3 JXB 302 A 1 HETATM 14 N N4 JXB . . . C 3 18.07 13.169 12.102 1 84.62 ? N4 JXB 302 A 1 HETATM 15 N N5 JXB . . . C 3 20.603 14.625 11.112 1 84.52 ? N5 JXB 302 A 1 HETATM 16 N N6 JXB . . . C 3 21.757 12.804 11.943 1 84.33 ? N6 JXB 302 A 1 HETATM 17 N N7 JXB . . . C 3 20.699 10.918 13.009 1 84.2 ? N7 JXB 302 A 1 HETATM 18 BR BR JXB . . . C 3 15.611 12.1 12.902 1 85.89 ? BR JXB 302 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 18 #