data_6RC3 # _model_server_result.job_id XL5ScDLjFvWlQvk8ilMNQA _model_server_result.datetime_utc '2024-11-13 00:16:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rc3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6RC3 # _exptl.entry_id 6RC3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RC3 _cell.length_a 62.83 _cell.length_b 73.91 _cell.length_c 118.46 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RC3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 1 2 A,B,C,D,E 1 3 A,B,C,D,E 1 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 62.83 0 0 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 62.83 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 149 n n C1 C2 GOL sing 150 n n C1 H11 GOL sing 151 n n C1 H12 GOL sing 152 n n O1 HO1 GOL sing 153 n n C2 O2 GOL sing 154 n n C2 C3 GOL sing 155 n n C2 H2 GOL sing 156 n n O2 HO2 GOL sing 157 n n C3 O3 GOL sing 158 n n C3 H31 GOL sing 159 n n C3 H32 GOL sing 160 n n O3 HO3 GOL sing 161 n n # _atom_sites.entry_id 6RC3 _atom_sites.fract_transf_matrix[1][1] 0.015916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008442 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 301 1 CIT CIT . C 3 GOL A 1 302 1 GOL GOL . D 4 JXW A 1 303 1 JXW 2NC . E 5 HOH A 1 401 274 HOH HOH . E 5 HOH A 2 402 29 HOH HOH . E 5 HOH A 3 403 32 HOH HOH . E 5 HOH A 4 404 45 HOH HOH . E 5 HOH A 5 405 28 HOH HOH . E 5 HOH A 6 406 124 HOH HOH . E 5 HOH A 7 407 27 HOH HOH . E 5 HOH A 8 408 1 HOH HOH . E 5 HOH A 9 409 134 HOH HOH . E 5 HOH A 10 410 24 HOH HOH . E 5 HOH A 11 411 23 HOH HOH . E 5 HOH A 12 412 25 HOH HOH . E 5 HOH A 13 413 39 HOH HOH . E 5 HOH A 14 414 318 HOH HOH . E 5 HOH A 15 415 146 HOH HOH . E 5 HOH A 16 416 48 HOH HOH . E 5 HOH A 17 417 375 HOH HOH . E 5 HOH A 18 418 360 HOH HOH . E 5 HOH A 19 419 34 HOH HOH . E 5 HOH A 20 420 9 HOH HOH . E 5 HOH A 21 421 20 HOH HOH . E 5 HOH A 22 422 374 HOH HOH . E 5 HOH A 23 423 309 HOH HOH . E 5 HOH A 24 424 12 HOH HOH . E 5 HOH A 25 425 67 HOH HOH . E 5 HOH A 26 426 70 HOH HOH . E 5 HOH A 27 427 287 HOH HOH . E 5 HOH A 28 428 84 HOH HOH . E 5 HOH A 29 429 117 HOH HOH . E 5 HOH A 30 430 182 HOH HOH . E 5 HOH A 31 431 125 HOH HOH . E 5 HOH A 32 432 373 HOH HOH . E 5 HOH A 33 433 96 HOH HOH . E 5 HOH A 34 434 50 HOH HOH . E 5 HOH A 35 435 62 HOH HOH . E 5 HOH A 36 436 3 HOH HOH . E 5 HOH A 37 437 142 HOH HOH . E 5 HOH A 38 438 116 HOH HOH . E 5 HOH A 39 439 345 HOH HOH . E 5 HOH A 40 440 368 HOH HOH . E 5 HOH A 41 441 297 HOH HOH . E 5 HOH A 42 442 54 HOH HOH . E 5 HOH A 43 443 143 HOH HOH . E 5 HOH A 44 444 275 HOH HOH . E 5 HOH A 45 445 370 HOH HOH . E 5 HOH A 46 446 63 HOH HOH . E 5 HOH A 47 447 76 HOH HOH . E 5 HOH A 48 448 371 HOH HOH . E 5 HOH A 49 449 105 HOH HOH . E 5 HOH A 50 450 276 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 2.495 21.912 -1.864 1 76.72 ? C1 GOL 302 A 1 HETATM 2 O O1 GOL . . . C 3 2.241 20.685 -1.253 1 76.4 ? O1 GOL 302 A 1 HETATM 3 C C2 GOL . . . C 3 3.532 22.639 -0.982 1 77.51 ? C2 GOL 302 A 1 HETATM 4 O O2 GOL . . . C 3 3.119 22.725 0.339 1 78.13 ? O2 GOL 302 A 1 HETATM 5 C C3 GOL . . . C 3 3.708 24.028 -1.634 1 78 ? C3 GOL 302 A 1 HETATM 6 O O3 GOL . . . C 3 4.501 24.776 -0.763 1 78.61 ? O3 GOL 302 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 51 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #