data_6RCJ # _model_server_result.job_id KsfyKhYbR5w-TI_XPEkl1w _model_server_result.datetime_utc '2024-10-15 11:30:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rcj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6RCJ # _exptl.entry_id 6RCJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RCJ _cell.length_a 43.995 _cell.length_b 141.524 _cell.length_c 34.726 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RCJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6RCJ _atom_sites.fract_transf_matrix[1][1] 0.02273 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K0H A 1 201 1 K0H P15 . C 3 NO3 A 1 202 1 NO3 NO3 . D 3 NO3 A 1 203 2 NO3 NO3 . E 4 GOL A 1 204 1 GOL GOL . F 5 HOH A 1 301 71 HOH HOH . F 5 HOH A 2 302 102 HOH HOH . F 5 HOH A 3 303 24 HOH HOH . F 5 HOH A 4 304 60 HOH HOH . F 5 HOH A 5 305 52 HOH HOH . F 5 HOH A 6 306 59 HOH HOH . F 5 HOH A 7 307 80 HOH HOH . F 5 HOH A 8 308 56 HOH HOH . F 5 HOH A 9 309 70 HOH HOH . F 5 HOH A 10 310 57 HOH HOH . F 5 HOH A 11 311 46 HOH HOH . F 5 HOH A 12 312 14 HOH HOH . F 5 HOH A 13 313 64 HOH HOH . F 5 HOH A 14 314 88 HOH HOH . F 5 HOH A 15 315 40 HOH HOH . F 5 HOH A 16 316 31 HOH HOH . F 5 HOH A 17 317 19 HOH HOH . F 5 HOH A 18 318 22 HOH HOH . F 5 HOH A 19 319 11 HOH HOH . F 5 HOH A 20 320 3 HOH HOH . F 5 HOH A 21 321 77 HOH HOH . F 5 HOH A 22 322 32 HOH HOH . F 5 HOH A 23 323 115 HOH HOH . F 5 HOH A 24 324 75 HOH HOH . F 5 HOH A 25 325 69 HOH HOH . F 5 HOH A 26 326 15 HOH HOH . F 5 HOH A 27 327 63 HOH HOH . F 5 HOH A 28 328 51 HOH HOH . F 5 HOH A 29 329 83 HOH HOH . F 5 HOH A 30 330 4 HOH HOH . F 5 HOH A 31 331 53 HOH HOH . F 5 HOH A 32 332 8 HOH HOH . F 5 HOH A 33 333 73 HOH HOH . F 5 HOH A 34 334 5 HOH HOH . F 5 HOH A 35 335 81 HOH HOH . F 5 HOH A 36 336 95 HOH HOH . F 5 HOH A 37 337 28 HOH HOH . F 5 HOH A 38 338 105 HOH HOH . F 5 HOH A 39 339 39 HOH HOH . F 5 HOH A 40 340 92 HOH HOH . F 5 HOH A 41 341 12 HOH HOH . F 5 HOH A 42 342 9 HOH HOH . F 5 HOH A 43 343 38 HOH HOH . F 5 HOH A 44 344 16 HOH HOH . F 5 HOH A 45 345 21 HOH HOH . F 5 HOH A 46 346 65 HOH HOH . F 5 HOH A 47 347 110 HOH HOH . F 5 HOH A 48 348 50 HOH HOH . F 5 HOH A 49 349 72 HOH HOH . F 5 HOH A 50 350 44 HOH HOH . F 5 HOH A 51 351 82 HOH HOH . F 5 HOH A 52 352 41 HOH HOH . F 5 HOH A 53 353 13 HOH HOH . F 5 HOH A 54 354 94 HOH HOH . F 5 HOH A 55 355 36 HOH HOH . F 5 HOH A 56 356 30 HOH HOH . F 5 HOH A 57 357 42 HOH HOH . F 5 HOH A 58 358 35 HOH HOH . F 5 HOH A 59 359 62 HOH HOH . F 5 HOH A 60 360 29 HOH HOH . F 5 HOH A 61 361 58 HOH HOH . F 5 HOH A 62 362 27 HOH HOH . F 5 HOH A 63 363 103 HOH HOH . F 5 HOH A 64 364 1 HOH HOH . F 5 HOH A 65 365 108 HOH HOH . F 5 HOH A 66 366 89 HOH HOH . F 5 HOH A 67 367 20 HOH HOH . F 5 HOH A 68 368 37 HOH HOH . F 5 HOH A 69 369 49 HOH HOH . F 5 HOH A 70 370 48 HOH HOH . F 5 HOH A 71 371 10 HOH HOH . F 5 HOH A 72 372 7 HOH HOH . F 5 HOH A 73 373 25 HOH HOH . F 5 HOH A 74 374 67 HOH HOH . F 5 HOH A 75 375 17 HOH HOH . F 5 HOH A 76 376 68 HOH HOH . F 5 HOH A 77 377 90 HOH HOH . F 5 HOH A 78 378 6 HOH HOH . F 5 HOH A 79 379 2 HOH HOH . F 5 HOH A 80 380 47 HOH HOH . F 5 HOH A 81 381 23 HOH HOH . F 5 HOH A 82 382 98 HOH HOH . F 5 HOH A 83 383 109 HOH HOH . F 5 HOH A 84 384 112 HOH HOH . F 5 HOH A 85 385 116 HOH HOH . F 5 HOH A 86 386 93 HOH HOH . F 5 HOH A 87 387 85 HOH HOH . F 5 HOH A 88 388 33 HOH HOH . F 5 HOH A 89 389 107 HOH HOH . F 5 HOH A 90 390 96 HOH HOH . F 5 HOH A 91 391 26 HOH HOH . F 5 HOH A 92 392 18 HOH HOH . F 5 HOH A 93 393 86 HOH HOH . F 5 HOH A 94 394 84 HOH HOH . F 5 HOH A 95 395 87 HOH HOH . F 5 HOH A 96 396 78 HOH HOH . F 5 HOH A 97 397 117 HOH HOH . F 5 HOH A 98 398 101 HOH HOH . F 5 HOH A 99 399 99 HOH HOH . F 5 HOH A 100 400 66 HOH HOH . F 5 HOH A 101 401 114 HOH HOH . F 5 HOH A 102 402 104 HOH HOH . F 5 HOH A 103 403 34 HOH HOH . F 5 HOH A 104 404 55 HOH HOH . F 5 HOH A 105 405 76 HOH HOH . F 5 HOH A 106 406 91 HOH HOH . F 5 HOH A 107 407 61 HOH HOH . F 5 HOH A 108 408 113 HOH HOH . F 5 HOH A 109 409 79 HOH HOH . F 5 HOH A 110 410 111 HOH HOH . F 5 HOH A 111 411 106 HOH HOH . F 5 HOH A 112 412 54 HOH HOH . F 5 HOH A 113 413 97 HOH HOH . F 5 HOH A 114 414 100 HOH HOH . F 5 HOH A 115 415 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 67.031 26.181 17.436 0.97 76.36 ? C1 GOL 204 A 1 HETATM 2 O O1 GOL . . . E 4 65.975 26.8 18.119 0.97 69.77 ? O1 GOL 204 A 1 HETATM 3 C C2 GOL . . . E 4 67.461 27.12 16.282 0.97 70.34 ? C2 GOL 204 A 1 HETATM 4 O O2 GOL . . . E 4 67.302 28.456 16.635 0.97 66.36 ? O2 GOL 204 A 1 HETATM 5 C C3 GOL . . . E 4 68.944 26.778 15.979 0.97 68.16 ? C3 GOL 204 A 1 HETATM 6 O O3 GOL . . . E 4 68.976 25.613 15.173 0.97 44.55 ? O3 GOL 204 A 1 HETATM 7 H H11 GOL . . . E 4 67.796 26.013 18.009 0.97 91.64 ? H11 GOL 204 A 1 HETATM 8 H H12 GOL . . . E 4 66.78 25.32 17.067 0.97 91.64 ? H12 GOL 204 A 1 HETATM 9 H HO1 GOL . . . E 4 65.803 26.31 18.792 0.97 83.73 ? HO1 GOL 204 A 1 HETATM 10 H H2 GOL . . . E 4 66.911 26.961 15.499 0.97 84.41 ? H2 GOL 204 A 1 HETATM 11 H HO2 GOL . . . E 4 67.732 28.588 17.356 0.97 79.63 ? HO2 GOL 204 A 1 HETATM 12 H H31 GOL . . . E 4 69.356 27.546 15.553 0.97 81.79 ? H31 GOL 204 A 1 HETATM 13 H H32 GOL . . . E 4 69.413 26.671 16.821 0.97 81.79 ? H32 GOL 204 A 1 HETATM 14 H HO3 GOL . . . E 4 69.46 25.796 14.499 0.97 53.46 ? HO3 GOL 204 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #