data_6RCX # _model_server_result.job_id hw3P1DWJoycOdPbRbxxYVg _model_server_result.datetime_utc '2024-11-13 04:00:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rcx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6RCX # _exptl.entry_id 6RCX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RCX _cell.length_a 50.142 _cell.length_b 63.167 _cell.length_c 108.459 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RCX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O HIS 90 A HIS 90 1_555 E MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc2 A ND1 HIS 90 A HIS 90 1_555 E MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc3 A OD2 ASP 111 A ASP 111 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc4 A OE2 GLU 113 A GLU 113 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc5 A OE1 GLU 153 A GLU 153 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc6 C O1A COA . A COA 301 1_555 E MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc7 D MN MN . A MN 302 1_555 H O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc8 D MN MN . A MN 302 1_555 H O HOH . A HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc9 E MN MN . A MN 303 1_555 H O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc10 E MN MN . A MN 303 1_555 H O HOH . A HOH 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? metalc ? metalc11 E MN MN . A MN 303 1_555 H O HOH . A HOH 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6RCX _atom_sites.fract_transf_matrix[1][1] 0.019943 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 COA A 1 301 301 COA COA . D 4 MN A 1 302 302 MN MN . E 4 MN A 1 303 303 MN MN . F 4 MN A 1 304 304 MN MN . G 5 CAC B 1 2201 1 CAC CAC . H 6 HOH A 1 401 7 HOH HOH . H 6 HOH A 2 402 103 HOH HOH . H 6 HOH A 3 403 30 HOH HOH . H 6 HOH A 4 404 135 HOH HOH . H 6 HOH A 5 405 114 HOH HOH . H 6 HOH A 6 406 26 HOH HOH . H 6 HOH A 7 407 95 HOH HOH . H 6 HOH A 8 408 54 HOH HOH . H 6 HOH A 9 409 106 HOH HOH . H 6 HOH A 10 410 68 HOH HOH . H 6 HOH A 11 411 121 HOH HOH . H 6 HOH A 12 412 40 HOH HOH . H 6 HOH A 13 413 134 HOH HOH . H 6 HOH A 14 414 118 HOH HOH . H 6 HOH A 15 415 27 HOH HOH . H 6 HOH A 16 416 43 HOH HOH . H 6 HOH A 17 417 102 HOH HOH . H 6 HOH A 18 418 2 HOH HOH . H 6 HOH A 19 419 34 HOH HOH . H 6 HOH A 20 420 109 HOH HOH . H 6 HOH A 21 421 119 HOH HOH . H 6 HOH A 22 422 131 HOH HOH . H 6 HOH A 23 423 45 HOH HOH . H 6 HOH A 24 424 37 HOH HOH . H 6 HOH A 25 425 22 HOH HOH . H 6 HOH A 26 426 36 HOH HOH . H 6 HOH A 27 427 5 HOH HOH . H 6 HOH A 28 428 91 HOH HOH . H 6 HOH A 29 429 84 HOH HOH . H 6 HOH A 30 430 64 HOH HOH . H 6 HOH A 31 431 115 HOH HOH . H 6 HOH A 32 432 9 HOH HOH . H 6 HOH A 33 433 32 HOH HOH . H 6 HOH A 34 434 143 HOH HOH . H 6 HOH A 35 435 17 HOH HOH . H 6 HOH A 36 436 8 HOH HOH . H 6 HOH A 37 437 71 HOH HOH . H 6 HOH A 38 438 59 HOH HOH . H 6 HOH A 39 439 19 HOH HOH . H 6 HOH A 40 440 1 HOH HOH . H 6 HOH A 41 441 89 HOH HOH . H 6 HOH A 42 442 18 HOH HOH . H 6 HOH A 43 443 39 HOH HOH . H 6 HOH A 44 444 13 HOH HOH . H 6 HOH A 45 445 79 HOH HOH . H 6 HOH A 46 446 15 HOH HOH . H 6 HOH A 47 447 90 HOH HOH . H 6 HOH A 48 448 105 HOH HOH . H 6 HOH A 49 449 85 HOH HOH . H 6 HOH A 50 450 35 HOH HOH . H 6 HOH A 51 451 41 HOH HOH . H 6 HOH A 52 452 38 HOH HOH . H 6 HOH A 53 453 25 HOH HOH . H 6 HOH A 54 454 60 HOH HOH . H 6 HOH A 55 455 6 HOH HOH . H 6 HOH A 56 456 21 HOH HOH . H 6 HOH A 57 457 31 HOH HOH . H 6 HOH A 58 458 80 HOH HOH . H 6 HOH A 59 459 61 HOH HOH . H 6 HOH A 60 460 78 HOH HOH . H 6 HOH A 61 461 3 HOH HOH . H 6 HOH A 62 462 144 HOH HOH . H 6 HOH A 63 463 24 HOH HOH . H 6 HOH A 64 464 51 HOH HOH . H 6 HOH A 65 465 141 HOH HOH . H 6 HOH A 66 466 16 HOH HOH . H 6 HOH A 67 467 23 HOH HOH . H 6 HOH A 68 468 14 HOH HOH . H 6 HOH A 69 469 94 HOH HOH . H 6 HOH A 70 470 29 HOH HOH . H 6 HOH A 71 471 129 HOH HOH . H 6 HOH A 72 472 70 HOH HOH . H 6 HOH A 73 473 137 HOH HOH . H 6 HOH A 74 474 44 HOH HOH . H 6 HOH A 75 475 55 HOH HOH . H 6 HOH A 76 476 76 HOH HOH . H 6 HOH A 77 477 47 HOH HOH . H 6 HOH A 78 478 4 HOH HOH . H 6 HOH A 79 479 67 HOH HOH . H 6 HOH A 80 480 49 HOH HOH . H 6 HOH A 81 481 73 HOH HOH . H 6 HOH A 82 482 86 HOH HOH . H 6 HOH A 83 483 107 HOH HOH . H 6 HOH A 84 484 104 HOH HOH . H 6 HOH A 85 485 50 HOH HOH . H 6 HOH A 86 486 116 HOH HOH . H 6 HOH A 87 487 28 HOH HOH . H 6 HOH A 88 488 57 HOH HOH . H 6 HOH A 89 489 12 HOH HOH . H 6 HOH A 90 490 82 HOH HOH . H 6 HOH A 91 491 66 HOH HOH . H 6 HOH A 92 492 46 HOH HOH . H 6 HOH A 93 493 75 HOH HOH . H 6 HOH A 94 494 11 HOH HOH . H 6 HOH A 95 495 65 HOH HOH . H 6 HOH A 96 496 99 HOH HOH . H 6 HOH A 97 497 93 HOH HOH . H 6 HOH A 98 498 88 HOH HOH . H 6 HOH A 99 499 138 HOH HOH . H 6 HOH A 100 500 120 HOH HOH . H 6 HOH A 101 501 112 HOH HOH . H 6 HOH A 102 502 125 HOH HOH . H 6 HOH A 103 503 130 HOH HOH . H 6 HOH A 104 504 87 HOH HOH . H 6 HOH A 105 505 96 HOH HOH . H 6 HOH A 106 506 20 HOH HOH . H 6 HOH A 107 507 53 HOH HOH . H 6 HOH A 108 508 42 HOH HOH . H 6 HOH A 109 509 100 HOH HOH . H 6 HOH A 110 510 126 HOH HOH . H 6 HOH A 111 511 136 HOH HOH . H 6 HOH A 112 512 63 HOH HOH . H 6 HOH A 113 513 74 HOH HOH . H 6 HOH A 114 514 97 HOH HOH . H 6 HOH A 115 515 33 HOH HOH . H 6 HOH A 116 516 132 HOH HOH . H 6 HOH A 117 517 56 HOH HOH . H 6 HOH A 118 518 58 HOH HOH . H 6 HOH A 119 519 128 HOH HOH . H 6 HOH A 120 520 123 HOH HOH . H 6 HOH A 121 521 69 HOH HOH . H 6 HOH A 122 522 62 HOH HOH . H 6 HOH A 123 523 140 HOH HOH . H 6 HOH A 124 524 122 HOH HOH . H 6 HOH A 125 525 92 HOH HOH . H 6 HOH A 126 526 127 HOH HOH . I 6 HOH B 1 2301 72 HOH HOH . I 6 HOH B 2 2302 83 HOH HOH . I 6 HOH B 3 2303 48 HOH HOH . I 6 HOH B 4 2304 10 HOH HOH . I 6 HOH B 5 2305 113 HOH HOH . I 6 HOH B 6 2306 52 HOH HOH . I 6 HOH B 7 2307 124 HOH HOH . I 6 HOH B 8 2308 111 HOH HOH . I 6 HOH B 9 2309 81 HOH HOH . I 6 HOH B 10 2310 77 HOH HOH . I 6 HOH B 11 2311 108 HOH HOH . I 6 HOH B 12 2312 139 HOH HOH . I 6 HOH B 13 2313 117 HOH HOH . I 6 HOH B 14 2314 142 HOH HOH . I 6 HOH B 15 2315 101 HOH HOH . I 6 HOH B 16 2316 98 HOH HOH . I 6 HOH B 17 2317 110 HOH HOH . I 6 HOH B 18 2318 133 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -5.292 _atom_site.Cartn_y 10.425 _atom_site.Cartn_z -19.296 _atom_site.occupancy 0.46 _atom_site.B_iso_or_equiv 31.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #