data_6RFI # _model_server_result.job_id elrbE95ks-Ev5FGbkJK7QA _model_server_result.datetime_utc '2024-12-27 09:56:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rfi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 6RFI # _exptl.entry_id 6RFI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 394.47 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl 4-[4-[(6-cyanoquinazolin-4-yl)amino]cyclohexyl]piperazine-1-carboxylate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RFI _cell.length_a 87.904 _cell.length_b 116.781 _cell.length_c 141.248 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RFI _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 206 A MET 344 1_555 A N TPO 207 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale2 A C TPO 207 A TPO 345 1_555 A N SEP 208 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale3 A C SEP 208 A SEP 346 1_555 A N ARG 209 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale4 B C MET 206 B MET 344 1_555 B N TPO 207 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale5 B C TPO 207 B TPO 345 1_555 B N SEP 208 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale6 B C SEP 208 B SEP 346 1_555 B N ARG 209 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? # _chem_comp.formula 'C21 H26 N6 O2' _chem_comp.formula_weight 394.47 _chem_comp.id K1H _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl 4-[4-[(6-cyanoquinazolin-4-yl)amino]cyclohexyl]piperazine-1-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O2 K1H sing 173 n n O2 C3 K1H sing 174 n n C10 C9 K1H sing 175 n n C10 N5 K1H sing 176 n n C9 N8 K1H sing 177 n n C3 N5 K1H sing 178 n n C3 O4 K1H doub 179 n n N5 C6 K1H sing 180 n n N8 C11 K1H sing 181 n n N8 C7 K1H sing 182 n n C11 C12 K1H sing 183 n n C11 C16 K1H sing 184 n n C12 C13 K1H sing 185 n n C6 C7 K1H sing 186 n n C13 C14 K1H sing 187 n n C16 C15 K1H sing 188 n n N29 C28 K1H trip 189 n n C15 C14 K1H sing 190 n n C14 N17 K1H sing 191 n n C28 C25 K1H sing 192 n n N17 C18 K1H sing 193 n n C24 C25 K1H doub 194 n y C24 C23 K1H sing 195 n y C25 C26 K1H sing 196 n y C18 C23 K1H doub 197 n y C18 N19 K1H sing 198 n y C23 C22 K1H sing 199 n y N19 C20 K1H doub 200 n y C26 C27 K1H doub 201 n y C22 C27 K1H sing 202 n y C22 N21 K1H doub 203 n y C20 N21 K1H sing 204 n y C1 H1 K1H sing 205 n n C1 H2 K1H sing 206 n n C1 H3 K1H sing 207 n n C7 H4 K1H sing 208 n n C7 H5 K1H sing 209 n n C9 H6 K1H sing 210 n n C9 H7 K1H sing 211 n n C10 H8 K1H sing 212 n n C10 H9 K1H sing 213 n n C11 H10 K1H sing 214 n n C12 H11 K1H sing 215 n n C12 H12 K1H sing 216 n n C13 H13 K1H sing 217 n n C13 H14 K1H sing 218 n n C14 H15 K1H sing 219 n n C15 H16 K1H sing 220 n n C15 H17 K1H sing 221 n n C16 H18 K1H sing 222 n n C16 H19 K1H sing 223 n n C20 H20 K1H sing 224 n n C24 H21 K1H sing 225 n n C27 H22 K1H sing 226 n n C6 H23 K1H sing 227 n n C6 H24 K1H sing 228 n n N17 H26 K1H sing 229 n n C26 H27 K1H sing 230 n n # _atom_sites.entry_id 6RFI _atom_sites.fract_transf_matrix[1][1] 0.011376 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00708 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 501 3 SO4 SO4 . D 3 K1H A 1 502 1 K1H INH . E 2 SO4 B 1 501 1 SO4 SO4 . F 3 K1H B 1 502 2 K1H INH . G 4 HOH A 1 601 12 HOH HOH . G 4 HOH A 2 602 42 HOH HOH . G 4 HOH A 3 603 26 HOH HOH . G 4 HOH A 4 604 114 HOH HOH . G 4 HOH A 5 605 87 HOH HOH . G 4 HOH A 6 606 49 HOH HOH . G 4 HOH A 7 607 52 HOH HOH . G 4 HOH A 8 608 58 HOH HOH . G 4 HOH A 9 609 48 HOH HOH . G 4 HOH A 10 610 65 HOH HOH . G 4 HOH A 11 611 123 HOH HOH . G 4 HOH A 12 612 55 HOH HOH . G 4 HOH A 13 613 33 HOH HOH . G 4 HOH A 14 614 59 HOH HOH . G 4 HOH A 15 615 4 HOH HOH . G 4 HOH A 16 616 126 HOH HOH . G 4 HOH A 17 617 119 HOH HOH . G 4 HOH A 18 618 2 HOH HOH . G 4 HOH A 19 619 6 HOH HOH . G 4 HOH A 20 620 67 HOH HOH . G 4 HOH A 21 621 22 HOH HOH . G 4 HOH A 22 622 89 HOH HOH . G 4 HOH A 23 623 79 HOH HOH . G 4 HOH A 24 624 78 HOH HOH . G 4 HOH A 25 625 40 HOH HOH . G 4 HOH A 26 626 31 HOH HOH . G 4 HOH A 27 627 113 HOH HOH . G 4 HOH A 28 628 108 HOH HOH . G 4 HOH A 29 629 97 HOH HOH . G 4 HOH A 30 630 50 HOH HOH . G 4 HOH A 31 631 30 HOH HOH . G 4 HOH A 32 632 88 HOH HOH . G 4 HOH A 33 633 80 HOH HOH . G 4 HOH A 34 634 76 HOH HOH . G 4 HOH A 35 635 96 HOH HOH . G 4 HOH A 36 636 95 HOH HOH . G 4 HOH A 37 637 99 HOH HOH . G 4 HOH A 38 638 74 HOH HOH . G 4 HOH A 39 639 69 HOH HOH . G 4 HOH A 40 640 107 HOH HOH . G 4 HOH A 41 641 125 HOH HOH . G 4 HOH A 42 642 57 HOH HOH . G 4 HOH A 43 643 124 HOH HOH . G 4 HOH A 44 644 71 HOH HOH . G 4 HOH A 45 645 75 HOH HOH . G 4 HOH A 46 646 56 HOH HOH . G 4 HOH A 47 647 37 HOH HOH . G 4 HOH A 48 648 128 HOH HOH . G 4 HOH A 49 649 98 HOH HOH . G 4 HOH A 50 650 90 HOH HOH . G 4 HOH A 51 651 9 HOH HOH . G 4 HOH A 52 652 85 HOH HOH . G 4 HOH A 53 653 86 HOH HOH . G 4 HOH A 54 654 41 HOH HOH . G 4 HOH A 55 655 122 HOH HOH . G 4 HOH A 56 656 109 HOH HOH . G 4 HOH A 57 657 115 HOH HOH . G 4 HOH A 58 658 77 HOH HOH . G 4 HOH A 59 659 46 HOH HOH . G 4 HOH A 60 660 51 HOH HOH . G 4 HOH A 61 661 47 HOH HOH . G 4 HOH A 62 662 73 HOH HOH . H 4 HOH B 1 601 39 HOH HOH . H 4 HOH B 2 602 28 HOH HOH . H 4 HOH B 3 603 11 HOH HOH . H 4 HOH B 4 604 60 HOH HOH . H 4 HOH B 5 605 44 HOH HOH . H 4 HOH B 6 606 35 HOH HOH . H 4 HOH B 7 607 20 HOH HOH . H 4 HOH B 8 608 53 HOH HOH . H 4 HOH B 9 609 25 HOH HOH . H 4 HOH B 10 610 70 HOH HOH . H 4 HOH B 11 611 92 HOH HOH . H 4 HOH B 12 612 34 HOH HOH . H 4 HOH B 13 613 16 HOH HOH . H 4 HOH B 14 614 3 HOH HOH . H 4 HOH B 15 615 63 HOH HOH . H 4 HOH B 16 616 105 HOH HOH . H 4 HOH B 17 617 91 HOH HOH . H 4 HOH B 18 618 17 HOH HOH . H 4 HOH B 19 619 54 HOH HOH . H 4 HOH B 20 620 68 HOH HOH . H 4 HOH B 21 621 36 HOH HOH . H 4 HOH B 22 622 29 HOH HOH . H 4 HOH B 23 623 23 HOH HOH . H 4 HOH B 24 624 83 HOH HOH . H 4 HOH B 25 625 15 HOH HOH . H 4 HOH B 26 626 81 HOH HOH . H 4 HOH B 27 627 27 HOH HOH . H 4 HOH B 28 628 7 HOH HOH . H 4 HOH B 29 629 120 HOH HOH . H 4 HOH B 30 630 112 HOH HOH . H 4 HOH B 31 631 62 HOH HOH . H 4 HOH B 32 632 103 HOH HOH . H 4 HOH B 33 633 93 HOH HOH . H 4 HOH B 34 634 94 HOH HOH . H 4 HOH B 35 635 13 HOH HOH . H 4 HOH B 36 636 21 HOH HOH . H 4 HOH B 37 637 82 HOH HOH . H 4 HOH B 38 638 127 HOH HOH . H 4 HOH B 39 639 84 HOH HOH . H 4 HOH B 40 640 43 HOH HOH . H 4 HOH B 41 641 118 HOH HOH . H 4 HOH B 42 642 111 HOH HOH . H 4 HOH B 43 643 14 HOH HOH . H 4 HOH B 44 644 32 HOH HOH . H 4 HOH B 45 645 117 HOH HOH . H 4 HOH B 46 646 64 HOH HOH . H 4 HOH B 47 647 19 HOH HOH . H 4 HOH B 48 648 45 HOH HOH . H 4 HOH B 49 649 5 HOH HOH . H 4 HOH B 50 650 18 HOH HOH . H 4 HOH B 51 651 100 HOH HOH . H 4 HOH B 52 652 110 HOH HOH . H 4 HOH B 53 653 61 HOH HOH . H 4 HOH B 54 654 116 HOH HOH . H 4 HOH B 55 655 121 HOH HOH . H 4 HOH B 56 656 72 HOH HOH . H 4 HOH B 57 657 66 HOH HOH . H 4 HOH B 58 658 24 HOH HOH . H 4 HOH B 59 659 102 HOH HOH . H 4 HOH B 60 660 106 HOH HOH . H 4 HOH B 61 661 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 K1H . . . D 3 -14.264 -16.681 -15.436 1 65.26 ? C1 K1H 502 A 1 HETATM 2 C C3 K1H . . . D 3 -15.582 -17.65 -13.728 1 58.49 ? C3 K1H 502 A 1 HETATM 3 O O4 K1H . . . D 3 -14.859 -17.186 -12.878 1 59.76 ? O4 K1H 502 A 1 HETATM 4 C C7 K1H . . . D 3 -18.461 -18.501 -11.819 1 49.21 ? C7 K1H 502 A 1 HETATM 5 C C9 K1H . . . D 3 -18.98 -18.832 -14.172 1 48.02 ? C9 K1H 502 A 1 HETATM 6 C C10 K1H . . . D 3 -17.512 -19.068 -14.47 1 49.31 ? C10 K1H 502 A 1 HETATM 7 C C11 K1H . . . D 3 -20.732 -19.252 -12.467 1 45.38 ? C11 K1H 502 A 1 HETATM 8 C C12 K1H . . . D 3 -21.302 -17.87 -12.104 1 45.06 ? C12 K1H 502 A 1 HETATM 9 C C13 K1H . . . D 3 -22.782 -17.969 -11.737 1 43.74 ? C13 K1H 502 A 1 HETATM 10 C C14 K1H . . . D 3 -22.99 -18.974 -10.618 1 40.42 ? C14 K1H 502 A 1 HETATM 11 C C15 K1H . . . D 3 -22.491 -20.347 -11.031 1 39.97 ? C15 K1H 502 A 1 HETATM 12 C C16 K1H . . . D 3 -21.014 -20.312 -11.4 1 41.75 ? C16 K1H 502 A 1 HETATM 13 C C20 K1H . . . D 3 -24.316 -19.502 -6.743 1 37.3 ? C20 K1H 502 A 1 HETATM 14 C C22 K1H . . . D 3 -26.52 -19.578 -7.329 1 35.6 ? C22 K1H 502 A 1 HETATM 15 C C24 K1H . . . D 3 -27.222 -19.212 -9.645 1 38.41 ? C24 K1H 502 A 1 HETATM 16 C C27 K1H . . . D 3 -27.875 -19.821 -6.999 1 35.79 ? C27 K1H 502 A 1 HETATM 17 N N29 K1H . . . D 3 -30.34 -19.484 -11.124 1 44.15 ? N29 K1H 502 A 1 HETATM 18 O O2 K1H . . . D 3 -15.383 -17.516 -15.05 1 62.58 ? O2 K1H 502 A 1 HETATM 19 N N5 K1H . . . D 3 -16.671 -18.403 -13.461 1 51.87 ? N5 K1H 502 A 1 HETATM 20 C C6 K1H . . . D 3 -17.005 -18.77 -12.081 1 49.66 ? C6 K1H 502 A 1 HETATM 21 N N8 K1H . . . D 3 -19.293 -19.235 -12.79 1 48.95 ? N8 K1H 502 A 1 HETATM 22 N N17 K1H . . . D 3 -24.382 -19.049 -10.231 1 36.47 ? N17 K1H 502 A 1 HETATM 23 C C18 K1H . . . D 3 -24.783 -19.18 -8.956 1 37.15 ? C18 K1H 502 A 1 HETATM 24 N N19 K1H . . . D 3 -23.858 -19.276 -7.983 1 38.07 ? N19 K1H 502 A 1 HETATM 25 N N21 K1H . . . D 3 -25.574 -19.665 -6.34 1 36.81 ? N21 K1H 502 A 1 HETATM 26 C C23 K1H . . . D 3 -26.187 -19.295 -8.677 1 36.42 ? C23 K1H 502 A 1 HETATM 27 C C25 K1H . . . D 3 -28.534 -19.457 -9.283 1 37.7 ? C25 K1H 502 A 1 HETATM 28 C C26 K1H . . . D 3 -28.849 -19.762 -7.954 1 37.31 ? C26 K1H 502 A 1 HETATM 29 C C28 K1H . . . D 3 -29.555 -19.473 -10.296 1 39.66 ? C28 K1H 502 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #