data_6RGI # _model_server_result.job_id RqsLU3hQs4IxMbEZ2Mn8Xg _model_server_result.datetime_utc '2024-11-18 14:54:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rgi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6RGI # _exptl.entry_id 6RGI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 1111.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description p-sulfonatocalix[6]arene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6RGI _cell.length_a 74.762 _cell.length_b 74.762 _cell.length_c 60.033 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RGI _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 B CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.715 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 B CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 B FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc2 B FE HEC . A HEC 201 1_555 D N3 IMD . A IMD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? # _chem_comp.formula 'C42 H30 O24 S6 -6' _chem_comp.formula_weight 1111.063 _chem_comp.id FWQ _chem_comp.mon_nstd_flag . _chem_comp.name p-sulfonatocalix[6]arene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O24 S71 FWQ doub 83 n n C43 C50 FWQ sing 84 n n C43 C40 FWQ sing 85 n n C51 C52 FWQ doub 86 n y C51 C50 FWQ sing 87 n y S71 O23 FWQ doub 88 n n S71 C52 FWQ sing 89 n n S71 O22 FWQ sing 90 n n C52 C53 FWQ sing 91 n y C50 C55 FWQ doub 92 n y O19 S70 FWQ doub 93 n n C39 C40 FWQ doub 94 n y C39 C38 FWQ sing 95 n y O20 S70 FWQ doub 96 n n C40 C41 FWQ sing 97 n y C55 O6 FWQ sing 98 n n C55 C54 FWQ sing 99 n y C53 C54 FWQ doub 100 n y C54 C72 FWQ sing 101 n n S70 C38 FWQ sing 102 n n S70 O21 FWQ sing 103 n n C38 C37 FWQ doub 104 n y C41 O5 FWQ sing 105 n n C41 C36 FWQ doub 106 n y C72 C46 FWQ sing 107 n n C37 C36 FWQ sing 108 n y C36 C29 FWQ sing 109 n n C29 C20 FWQ sing 110 n n C46 C45 FWQ doub 111 n y C46 C47 FWQ sing 112 n y O1 C45 FWQ sing 113 n n O17 S69 FWQ doub 114 n n C45 C44 FWQ sing 115 n y C19 C20 FWQ doub 116 n y C19 C18 FWQ sing 117 n y C47 C48 FWQ doub 118 n y C20 C21 FWQ sing 119 n y O16 S69 FWQ doub 120 n n S69 C18 FWQ sing 121 n n S69 O18 FWQ sing 122 n n C18 C17 FWQ doub 123 n y C21 O4 FWQ sing 124 n n C21 C16 FWQ doub 125 n y C44 C14 FWQ sing 126 n n C44 C49 FWQ doub 127 n y C48 C49 FWQ sing 128 n y C48 S64 FWQ sing 129 n n O9 S64 FWQ doub 130 n n C14 C12 FWQ sing 131 n n C17 C16 FWQ sing 132 n y S64 O7 FWQ doub 133 n n S64 O8 FWQ sing 134 n n C16 C15 FWQ sing 135 n n O2 C13 FWQ sing 136 n n C15 C4 FWQ sing 137 n n C12 C13 FWQ doub 138 n y C12 C11 FWQ sing 139 n y O3 C3 FWQ sing 140 n n C13 C8 FWQ sing 141 n y C11 C10 FWQ doub 142 n y C4 C3 FWQ doub 143 n y C4 C5 FWQ sing 144 n y C3 C2 FWQ sing 145 n y C8 C7 FWQ sing 146 n n C8 C9 FWQ doub 147 n y C10 C9 FWQ sing 148 n y C10 S67 FWQ sing 149 n n C2 C7 FWQ sing 150 n n C2 C1 FWQ doub 151 n y C5 C6 FWQ doub 152 n y O10 S67 FWQ doub 153 n n S67 O11 FWQ doub 154 n n S67 O12 FWQ sing 155 n n C1 C6 FWQ sing 156 n y C6 S68 FWQ sing 157 n n O15 S68 FWQ doub 158 n n S68 O13 FWQ doub 159 n n S68 O14 FWQ sing 160 n n C1 H1 FWQ sing 161 n n C5 H2 FWQ sing 162 n n C7 H3 FWQ sing 163 n n C7 H4 FWQ sing 164 n n C9 H5 FWQ sing 165 n n C11 H6 FWQ sing 166 n n C14 H7 FWQ sing 167 n n C14 H8 FWQ sing 168 n n C15 H9 FWQ sing 169 n n C15 H10 FWQ sing 170 n n C17 H11 FWQ sing 171 n n C19 H12 FWQ sing 172 n n C37 H13 FWQ sing 173 n n C29 H14 FWQ sing 174 n n C29 H15 FWQ sing 175 n n C39 H16 FWQ sing 176 n n C43 H17 FWQ sing 177 n n C43 H18 FWQ sing 178 n n C47 H19 FWQ sing 179 n n C49 H20 FWQ sing 180 n n C51 H21 FWQ sing 181 n n C53 H22 FWQ sing 182 n n O1 H23 FWQ sing 183 n n O2 H24 FWQ sing 184 n n O3 H25 FWQ sing 185 n n O4 H26 FWQ sing 186 n n O5 H27 FWQ sing 187 n n O6 H28 FWQ sing 188 n n C72 H29 FWQ sing 189 n n C72 H30 FWQ sing 190 n n # _atom_sites.entry_id 6RGI _atom_sites.fract_transf_matrix[1][1] 0.013376 _atom_sites.fract_transf_matrix[1][2] 0.007723 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015445 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016658 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 201 201 HEC HEM . C 3 FWQ A 1 202 1 FWQ SC6 . D 4 IMD A 1 203 1 IMD IMD . E 5 HOH A 1 301 31 HOH HOH . E 5 HOH A 2 302 12 HOH HOH . E 5 HOH A 3 303 6 HOH HOH . E 5 HOH A 4 304 2 HOH HOH . E 5 HOH A 5 305 26 HOH HOH . E 5 HOH A 6 306 24 HOH HOH . E 5 HOH A 7 307 8 HOH HOH . E 5 HOH A 8 308 3 HOH HOH . E 5 HOH A 9 309 9 HOH HOH . E 5 HOH A 10 310 14 HOH HOH . E 5 HOH A 11 311 10 HOH HOH . E 5 HOH A 12 312 5 HOH HOH . E 5 HOH A 13 313 11 HOH HOH . E 5 HOH A 14 314 20 HOH HOH . E 5 HOH A 15 315 1 HOH HOH . E 5 HOH A 16 316 23 HOH HOH . E 5 HOH A 17 317 19 HOH HOH . E 5 HOH A 18 318 15 HOH HOH . E 5 HOH A 19 319 32 HOH HOH . E 5 HOH A 20 320 7 HOH HOH . E 5 HOH A 21 321 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FWQ . . . C 3 -36.866 -13.779 8.141 1 69.26 ? C1 FWQ 202 A 1 HETATM 2 C C2 FWQ . . . C 3 -35.973 -13.357 7.144 1 64.15 ? C2 FWQ 202 A 1 HETATM 3 C C3 FWQ . . . C 3 -35.073 -12.311 7.413 1 66.47 ? C3 FWQ 202 A 1 HETATM 4 C C4 FWQ . . . C 3 -35.025 -11.737 8.7 1 71.84 ? C4 FWQ 202 A 1 HETATM 5 C C5 FWQ . . . C 3 -35.93 -12.178 9.692 1 72.26 ? C5 FWQ 202 A 1 HETATM 6 C C6 FWQ . . . C 3 -36.844 -13.22 9.425 1 73.11 ? C6 FWQ 202 A 1 HETATM 7 C C7 FWQ . . . C 3 -36.053 -14.041 5.792 1 55.87 ? C7 FWQ 202 A 1 HETATM 8 C C8 FWQ . . . C 3 -35.221 -15.316 5.731 1 50.43 ? C8 FWQ 202 A 1 HETATM 9 C C9 FWQ . . . C 3 -35.833 -16.572 5.8 1 47.17 ? C9 FWQ 202 A 1 HETATM 10 C C10 FWQ . . . C 3 -35.083 -17.749 5.707 1 47.54 ? C10 FWQ 202 A 1 HETATM 11 C C11 FWQ . . . C 3 -33.706 -17.675 5.508 1 46.43 ? C11 FWQ 202 A 1 HETATM 12 C C12 FWQ . . . C 3 -33.06 -16.433 5.45 1 50.17 ? C12 FWQ 202 A 1 HETATM 13 C C14 FWQ . . . C 3 -31.547 -16.321 5.257 1 51.94 ? C14 FWQ 202 A 1 HETATM 14 C C15 FWQ . . . C 3 -34.032 -10.623 9.029 1 75.41 ? C15 FWQ 202 A 1 HETATM 15 C C16 FWQ . . . C 3 -32.749 -11.149 9.67 1 78.77 ? C16 FWQ 202 A 1 HETATM 16 C C17 FWQ . . . C 3 -32.625 -11.145 11.078 1 82.25 ? C17 FWQ 202 A 1 HETATM 17 C C19 FWQ . . . C 3 -30.427 -12.137 10.895 1 80.54 ? C19 FWQ 202 A 1 HETATM 18 C C21 FWQ . . . C 3 -31.675 -11.625 8.893 1 78.25 ? C21 FWQ 202 A 1 HETATM 19 C C18 FWQ . . . C 3 -31.477 -11.681 11.711 1 83.94 ? C18 FWQ 202 A 1 HETATM 20 C C20 FWQ . . . C 3 -30.521 -12.133 9.501 1 76.76 ? C20 FWQ 202 A 1 HETATM 21 C C36 FWQ . . . C 3 -28.332 -13.463 9.346 1 72.02 ? C36 FWQ 202 A 1 HETATM 22 C C37 FWQ . . . C 3 -27.053 -12.92 9.379 1 75.38 ? C37 FWQ 202 A 1 HETATM 23 C C13 FWQ . . . C 3 -33.839 -15.262 5.536 1 50.8 ? C13 FWQ 202 A 1 HETATM 24 C C29 FWQ . . . C 3 -29.388 -12.645 8.637 1 73.46 ? C29 FWQ 202 A 1 HETATM 25 C C38 FWQ . . . C 3 -26.009 -13.608 10.011 1 77.08 ? C38 FWQ 202 A 1 HETATM 26 C C39 FWQ . . . C 3 -26.253 -14.871 10.586 1 72.26 ? C39 FWQ 202 A 1 HETATM 27 C C40 FWQ . . . C 3 -27.523 -15.456 10.5 1 66.63 ? C40 FWQ 202 A 1 HETATM 28 C C41 FWQ . . . C 3 -28.562 -14.736 9.883 1 68.62 ? C41 FWQ 202 A 1 HETATM 29 C C43 FWQ . . . C 3 -27.734 -16.787 11.195 1 61.91 ? C43 FWQ 202 A 1 HETATM 30 C C44 FWQ . . . C 3 -30.794 -17.631 5.328 1 55.52 ? C44 FWQ 202 A 1 HETATM 31 C C45 FWQ . . . C 3 -30.572 -18.235 6.554 1 58.55 ? C45 FWQ 202 A 1 HETATM 32 C C46 FWQ . . . C 3 -29.881 -19.447 6.637 1 59.53 ? C46 FWQ 202 A 1 HETATM 33 C C47 FWQ . . . C 3 -29.395 -20.029 5.455 1 60.7 ? C47 FWQ 202 A 1 HETATM 34 C C48 FWQ . . . C 3 -29.559 -19.405 4.201 1 60.67 ? C48 FWQ 202 A 1 HETATM 35 C C49 FWQ . . . C 3 -30.266 -18.194 4.163 1 59.4 ? C49 FWQ 202 A 1 HETATM 36 C C50 FWQ . . . C 3 -27.564 -17.997 10.307 1 62.52 ? C50 FWQ 202 A 1 HETATM 37 C C51 FWQ . . . C 3 -26.332 -18.67 10.226 1 65.15 ? C51 FWQ 202 A 1 HETATM 38 C C52 FWQ . . . C 3 -26.185 -19.806 9.395 1 67.97 ? C52 FWQ 202 A 1 HETATM 39 C C53 FWQ . . . C 3 -27.305 -20.241 8.656 1 67.15 ? C53 FWQ 202 A 1 HETATM 40 C C54 FWQ . . . C 3 -28.544 -19.596 8.759 1 63.63 ? C54 FWQ 202 A 1 HETATM 41 C C55 FWQ . . . C 3 -28.667 -18.485 9.615 1 64.54 ? C55 FWQ 202 A 1 HETATM 42 O O1 FWQ . . . C 3 -31.115 -17.646 7.652 1 60.56 ? O1 FWQ 202 A 1 HETATM 43 O O2 FWQ . . . C 3 -33.238 -14.043 5.469 1 49.88 ? O2 FWQ 202 A 1 HETATM 44 O O3 FWQ . . . C 3 -34.251 -11.861 6.421 1 63.5 ? O3 FWQ 202 A 1 HETATM 45 O O4 FWQ . . . C 3 -31.746 -11.621 7.53 1 79.31 ? O4 FWQ 202 A 1 HETATM 46 O O5 FWQ . . . C 3 -29.82 -15.236 9.829 1 69.1 ? O5 FWQ 202 A 1 HETATM 47 O O6 FWQ . . . C 3 -29.855 -17.859 9.821 1 66.75 ? O6 FWQ 202 A 1 HETATM 48 S S64 FWQ . . . C 3 -29.003 -20.057 2.823 1 59.88 ? S64 FWQ 202 A 1 HETATM 49 S S67 FWQ . . . C 3 -35.802 -19.178 5.662 1 55.24 ? S67 FWQ 202 A 1 HETATM 50 S S68 FWQ . . . C 3 -37.918 -13.732 10.518 1 76.07 ? S68 FWQ 202 A 1 HETATM 51 S S69 FWQ . . . C 3 -31.351 -11.759 13.329 1 84.73 ? S69 FWQ 202 A 1 HETATM 52 S S70 FWQ . . . C 3 -24.552 -12.934 10.049 1 80.48 ? S70 FWQ 202 A 1 HETATM 53 S S71 FWQ . . . C 3 -24.752 -20.54 9.202 1 68.26 ? S71 FWQ 202 A 1 HETATM 54 C C72 FWQ . . . C 3 -29.704 -20.162 7.966 1 59.66 ? C72 FWQ 202 A 1 HETATM 55 O O7 FWQ . . . C 3 -28.371 -19.006 1.988 1 58.12 ? O7 FWQ 202 A 1 HETATM 56 O O8 FWQ . . . C 3 -28.061 -21.162 3.109 1 58.55 ? O8 FWQ 202 A 1 HETATM 57 O O9 FWQ . . . C 3 -30.106 -20.644 2.032 1 61.34 ? O9 FWQ 202 A 1 HETATM 58 O O10 FWQ . . . C 3 -35.621 -19.96 6.889 1 55.15 ? O10 FWQ 202 A 1 HETATM 59 O O11 FWQ . . . C 3 -37.244 -19.038 5.36 1 59.15 ? O11 FWQ 202 A 1 HETATM 60 O O12 FWQ . . . C 3 -35.28 -20.014 4.556 1 58.81 ? O12 FWQ 202 A 1 HETATM 61 O O13 FWQ . . . C 3 -37.578 -13.127 11.831 1 77.56 ? O13 FWQ 202 A 1 HETATM 62 O O14 FWQ . . . C 3 -39.256 -13.239 10.106 1 76.64 ? O14 FWQ 202 A 1 HETATM 63 O O15 FWQ . . . C 3 -38.004 -15.219 10.614 1 72.84 ? O15 FWQ 202 A 1 HETATM 64 O O16 FWQ . . . C 3 -32.613 -12.321 13.883 1 82.35 ? O16 FWQ 202 A 1 HETATM 65 O O17 FWQ . . . C 3 -30.238 -12.666 13.728 1 82.29 ? O17 FWQ 202 A 1 HETATM 66 O O18 FWQ . . . C 3 -31.105 -10.388 13.862 1 84.12 ? O18 FWQ 202 A 1 HETATM 67 O O19 FWQ . . . C 3 -24.678 -11.448 10.031 1 78.96 ? O19 FWQ 202 A 1 HETATM 68 O O20 FWQ . . . C 3 -23.829 -13.373 11.271 1 82.08 ? O20 FWQ 202 A 1 HETATM 69 O O21 FWQ . . . C 3 -23.784 -13.37 8.856 1 81.13 ? O21 FWQ 202 A 1 HETATM 70 O O22 FWQ . . . C 3 -24.735 -21.905 9.78 1 64.06 ? O22 FWQ 202 A 1 HETATM 71 O O23 FWQ . . . C 3 -24.455 -20.651 7.754 1 69.27 ? O23 FWQ 202 A 1 HETATM 72 O O24 FWQ . . . C 3 -23.688 -19.71 9.814 1 70.11 ? O24 FWQ 202 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 360 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 72 #