data_6RGZ # _model_server_result.job_id iy1_PLXNGMYBFDbnsv0KDQ _model_server_result.datetime_utc '2025-01-24 14:42:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rgz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":503}' # _entry.id 6RGZ # _exptl.entry_id 6RGZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.35 _cell.angle_gamma 90 _cell.entry_id 6RGZ _cell.length_a 68.736 _cell.length_b 93.608 _cell.length_c 173.927 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RGZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 U N N ? 4 V N N ? 4 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 99 A CYS 330 1_555 A SG CYS 128 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 B SG CYS 99 B CYS 330 1_555 B SG CYS 128 B CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? covale ? covale1 C C LEU 52 C LEU 52 1_555 C N BFD 53 C BFD 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 C C BFD 53 C BFD 53 1_555 C N ILE 54 C ILE 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 D C LEU 52 D LEU 52 1_555 D N BFD 53 D BFD 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 D C BFD 53 D BFD 53 1_555 D N ILE 54 D ILE 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 C OD1 ASP 10 C ASP 10 1_555 P MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc2 C OD2 BFD 53 C BFD 53 1_555 P MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc3 C O MET 55 C MET 55 1_555 P MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc4 P MG MG . C MG 201 1_555 Z O HOH . C HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc5 P MG MG . C MG 201 1_555 Z O HOH . C HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc6 D OD1 ASP 10 D ASP 10 1_555 T MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc7 D OD2 BFD 53 D BFD 53 1_555 T MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc8 D O MET 55 D MET 55 1_555 T MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc9 T MG MG . D MG 201 1_555 AA O HOH . D HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc10 T MG MG . D MG 201 1_555 AA O HOH . D HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 352 n n S O2 SO4 doub 353 n n S O3 SO4 sing 354 n n S O4 SO4 sing 355 n n # _atom_sites.entry_id 6RGZ _atom_sites.fract_transf_matrix[1][1] 0.014548 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000851 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005759 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ADP A 1 501 1 ADP ADP . F 4 SO4 A 1 502 9 SO4 SO4 . G 4 SO4 A 1 503 13 SO4 SO4 . H 4 SO4 A 1 504 14 SO4 SO4 . I 3 ADP B 1 501 2 ADP ADP . J 4 SO4 B 1 502 4 SO4 SO4 . K 4 SO4 B 1 503 5 SO4 SO4 . L 4 SO4 B 1 504 6 SO4 SO4 . M 4 SO4 B 1 505 8 SO4 SO4 . N 4 SO4 B 1 506 11 SO4 SO4 . O 5 CL B 1 507 3 CL CL . P 6 MG C 1 201 1 MG MG . Q 4 SO4 C 1 202 1 SO4 SO4 . R 4 SO4 C 1 203 7 SO4 SO4 . S 4 SO4 C 1 204 10 SO4 SO4 . T 6 MG D 1 201 2 MG MG . U 4 SO4 D 1 202 2 SO4 SO4 . V 4 SO4 D 1 203 3 SO4 SO4 . W 4 SO4 D 1 204 12 SO4 SO4 . X 7 HOH A 1 601 45 HOH HOH . X 7 HOH A 2 602 35 HOH HOH . X 7 HOH A 3 603 30 HOH HOH . X 7 HOH A 4 604 140 HOH HOH . X 7 HOH A 5 605 185 HOH HOH . X 7 HOH A 6 606 42 HOH HOH . X 7 HOH A 7 607 34 HOH HOH . X 7 HOH A 8 608 46 HOH HOH . X 7 HOH A 9 609 39 HOH HOH . X 7 HOH A 10 610 75 HOH HOH . X 7 HOH A 11 611 33 HOH HOH . X 7 HOH A 12 612 58 HOH HOH . X 7 HOH A 13 613 19 HOH HOH . X 7 HOH A 14 614 138 HOH HOH . X 7 HOH A 15 615 145 HOH HOH . X 7 HOH A 16 616 67 HOH HOH . X 7 HOH A 17 617 76 HOH HOH . X 7 HOH A 18 618 74 HOH HOH . X 7 HOH A 19 619 47 HOH HOH . X 7 HOH A 20 620 49 HOH HOH . X 7 HOH A 21 621 55 HOH HOH . X 7 HOH A 22 622 143 HOH HOH . X 7 HOH A 23 623 6 HOH HOH . X 7 HOH A 24 624 137 HOH HOH . X 7 HOH A 25 625 136 HOH HOH . X 7 HOH A 26 626 209 HOH HOH . X 7 HOH A 27 627 53 HOH HOH . X 7 HOH A 28 628 36 HOH HOH . X 7 HOH A 29 629 146 HOH HOH . X 7 HOH A 30 630 57 HOH HOH . X 7 HOH A 31 631 37 HOH HOH . X 7 HOH A 32 632 82 HOH HOH . X 7 HOH A 33 633 81 HOH HOH . X 7 HOH A 34 634 25 HOH HOH . X 7 HOH A 35 635 197 HOH HOH . X 7 HOH A 36 636 68 HOH HOH . X 7 HOH A 37 637 61 HOH HOH . X 7 HOH A 38 638 11 HOH HOH . X 7 HOH A 39 639 29 HOH HOH . X 7 HOH A 40 640 144 HOH HOH . X 7 HOH A 41 641 84 HOH HOH . X 7 HOH A 42 642 181 HOH HOH . X 7 HOH A 43 643 79 HOH HOH . X 7 HOH A 44 644 80 HOH HOH . X 7 HOH A 45 645 62 HOH HOH . X 7 HOH A 46 646 85 HOH HOH . X 7 HOH A 47 647 70 HOH HOH . X 7 HOH A 48 648 88 HOH HOH . X 7 HOH A 49 649 66 HOH HOH . X 7 HOH A 50 650 193 HOH HOH . X 7 HOH A 51 651 83 HOH HOH . X 7 HOH A 52 652 16 HOH HOH . X 7 HOH A 53 653 18 HOH HOH . X 7 HOH A 54 654 50 HOH HOH . X 7 HOH A 55 655 255 HOH HOH . X 7 HOH A 56 656 54 HOH HOH . X 7 HOH A 57 657 40 HOH HOH . X 7 HOH A 58 658 254 HOH HOH . X 7 HOH A 59 659 48 HOH HOH . X 7 HOH A 60 660 186 HOH HOH . X 7 HOH A 61 661 189 HOH HOH . X 7 HOH A 62 662 187 HOH HOH . Y 7 HOH B 1 601 214 HOH HOH . Y 7 HOH B 2 602 100 HOH HOH . Y 7 HOH B 3 603 256 HOH HOH . Y 7 HOH B 4 604 196 HOH HOH . Y 7 HOH B 5 605 251 HOH HOH . Y 7 HOH B 6 606 96 HOH HOH . Y 7 HOH B 7 607 89 HOH HOH . Y 7 HOH B 8 608 152 HOH HOH . Y 7 HOH B 9 609 217 HOH HOH . Y 7 HOH B 10 610 123 HOH HOH . Y 7 HOH B 11 611 90 HOH HOH . Y 7 HOH B 12 612 114 HOH HOH . Y 7 HOH B 13 613 219 HOH HOH . Y 7 HOH B 14 614 216 HOH HOH . Y 7 HOH B 15 615 204 HOH HOH . Y 7 HOH B 16 616 131 HOH HOH . Y 7 HOH B 17 617 133 HOH HOH . Y 7 HOH B 18 618 119 HOH HOH . Y 7 HOH B 19 619 93 HOH HOH . Y 7 HOH B 20 620 116 HOH HOH . Y 7 HOH B 21 621 132 HOH HOH . Y 7 HOH B 22 622 107 HOH HOH . Y 7 HOH B 23 623 212 HOH HOH . Y 7 HOH B 24 624 101 HOH HOH . Y 7 HOH B 25 625 183 HOH HOH . Y 7 HOH B 26 626 126 HOH HOH . Y 7 HOH B 27 627 91 HOH HOH . Y 7 HOH B 28 628 150 HOH HOH . Y 7 HOH B 29 629 218 HOH HOH . Y 7 HOH B 30 630 221 HOH HOH . Y 7 HOH B 31 631 199 HOH HOH . Y 7 HOH B 32 632 213 HOH HOH . Y 7 HOH B 33 633 201 HOH HOH . Y 7 HOH B 34 634 225 HOH HOH . Y 7 HOH B 35 635 155 HOH HOH . Y 7 HOH B 36 636 102 HOH HOH . Y 7 HOH B 37 637 27 HOH HOH . Y 7 HOH B 38 638 99 HOH HOH . Y 7 HOH B 39 639 108 HOH HOH . Y 7 HOH B 40 640 106 HOH HOH . Y 7 HOH B 41 641 95 HOH HOH . Y 7 HOH B 42 642 205 HOH HOH . Y 7 HOH B 43 643 109 HOH HOH . Y 7 HOH B 44 644 203 HOH HOH . Y 7 HOH B 45 645 64 HOH HOH . Y 7 HOH B 46 646 130 HOH HOH . Y 7 HOH B 47 647 28 HOH HOH . Y 7 HOH B 48 648 222 HOH HOH . Y 7 HOH B 49 649 128 HOH HOH . Y 7 HOH B 50 650 215 HOH HOH . Y 7 HOH B 51 651 120 HOH HOH . Y 7 HOH B 52 652 260 HOH HOH . Y 7 HOH B 53 653 129 HOH HOH . Y 7 HOH B 54 654 24 HOH HOH . Y 7 HOH B 55 655 122 HOH HOH . Y 7 HOH B 56 656 121 HOH HOH . Y 7 HOH B 57 657 117 HOH HOH . Y 7 HOH B 58 658 115 HOH HOH . Y 7 HOH B 59 659 51 HOH HOH . Y 7 HOH B 60 660 94 HOH HOH . Y 7 HOH B 61 661 118 HOH HOH . Y 7 HOH B 62 662 159 HOH HOH . Y 7 HOH B 63 663 141 HOH HOH . Z 7 HOH C 1 301 161 HOH HOH . Z 7 HOH C 2 302 148 HOH HOH . Z 7 HOH C 3 303 167 HOH HOH . Z 7 HOH C 4 304 135 HOH HOH . Z 7 HOH C 5 305 21 HOH HOH . Z 7 HOH C 6 306 164 HOH HOH . Z 7 HOH C 7 307 3 HOH HOH . Z 7 HOH C 8 308 230 HOH HOH . Z 7 HOH C 9 309 8 HOH HOH . Z 7 HOH C 10 310 223 HOH HOH . Z 7 HOH C 11 311 176 HOH HOH . Z 7 HOH C 12 312 228 HOH HOH . Z 7 HOH C 13 313 162 HOH HOH . Z 7 HOH C 14 314 4 HOH HOH . Z 7 HOH C 15 315 5 HOH HOH . Z 7 HOH C 16 316 157 HOH HOH . Z 7 HOH C 17 317 165 HOH HOH . Z 7 HOH C 18 318 134 HOH HOH . Z 7 HOH C 19 319 264 HOH HOH . Z 7 HOH C 20 320 158 HOH HOH . Z 7 HOH C 21 321 23 HOH HOH . Z 7 HOH C 22 322 231 HOH HOH . Z 7 HOH C 23 323 78 HOH HOH . Z 7 HOH C 24 324 20 HOH HOH . Z 7 HOH C 25 325 220 HOH HOH . Z 7 HOH C 26 326 166 HOH HOH . Z 7 HOH C 27 327 156 HOH HOH . Z 7 HOH C 28 328 26 HOH HOH . Z 7 HOH C 29 329 163 HOH HOH . Z 7 HOH C 30 330 229 HOH HOH . Z 7 HOH C 31 331 227 HOH HOH . Z 7 HOH C 32 332 77 HOH HOH . Z 7 HOH C 33 333 265 HOH HOH . Z 7 HOH C 34 334 224 HOH HOH . Z 7 HOH C 35 335 22 HOH HOH . Z 7 HOH C 36 336 262 HOH HOH . Z 7 HOH C 37 337 71 HOH HOH . Z 7 HOH C 38 338 258 HOH HOH . Z 7 HOH C 39 339 160 HOH HOH . Z 7 HOH C 40 340 257 HOH HOH . AA 7 HOH D 1 301 44 HOH HOH . AA 7 HOH D 2 302 169 HOH HOH . AA 7 HOH D 3 303 168 HOH HOH . AA 7 HOH D 4 304 253 HOH HOH . AA 7 HOH D 5 305 69 HOH HOH . AA 7 HOH D 6 306 232 HOH HOH . AA 7 HOH D 7 307 174 HOH HOH . AA 7 HOH D 8 308 17 HOH HOH . AA 7 HOH D 9 309 170 HOH HOH . AA 7 HOH D 10 310 246 HOH HOH . AA 7 HOH D 11 311 237 HOH HOH . AA 7 HOH D 12 312 236 HOH HOH . AA 7 HOH D 13 313 173 HOH HOH . AA 7 HOH D 14 314 245 HOH HOH . AA 7 HOH D 15 315 15 HOH HOH . AA 7 HOH D 16 316 104 HOH HOH . AA 7 HOH D 17 317 41 HOH HOH . AA 7 HOH D 18 318 184 HOH HOH . AA 7 HOH D 19 319 238 HOH HOH . AA 7 HOH D 20 320 171 HOH HOH . AA 7 HOH D 21 321 65 HOH HOH . AA 7 HOH D 22 322 249 HOH HOH . AA 7 HOH D 23 323 172 HOH HOH . AA 7 HOH D 24 324 244 HOH HOH . AA 7 HOH D 25 325 239 HOH HOH . AA 7 HOH D 26 326 233 HOH HOH . AA 7 HOH D 27 327 248 HOH HOH . AA 7 HOH D 28 328 175 HOH HOH . AA 7 HOH D 29 329 63 HOH HOH . AA 7 HOH D 30 330 247 HOH HOH . AA 7 HOH D 31 331 194 HOH HOH . AA 7 HOH D 32 332 235 HOH HOH . AA 7 HOH D 33 333 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 4 -27.407 0.76 -27.442 1 105.55 ? S SO4 503 A 1 HETATM 2 O O1 SO4 . . . G 4 -26.693 1.536 -28.481 1 105.1 ? O1 SO4 503 A 1 HETATM 3 O O2 SO4 . . . G 4 -28.866 0.851 -27.683 1 104.86 ? O2 SO4 503 A 1 HETATM 4 O O3 SO4 . . . G 4 -26.974 -0.655 -27.502 1 104.3 ? O3 SO4 503 A 1 HETATM 5 O O4 SO4 . . . G 4 -27.095 1.313 -26.104 1 103.17 ? O4 SO4 503 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #