data_6RJF # _model_server_result.job_id KxSWMlfXAZNsf8RBKOkdJg _model_server_result.datetime_utc '2024-10-20 19:09:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6rjf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6RJF # _exptl.entry_id 6RJF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6RJF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RJF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 240-meric _pdbx_struct_assembly.oligomeric_count 240 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1-60 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'point symmetry operation' ? ? -0.13785 0.759105 -0.636205 -0.149036 0.619126 0.77102 0.979176 0.201102 0.027788 251.388 -59.8157 -51.703 2 'point symmetry operation' ? ? 0.851655 -0.486456 0.195049 -0.360259 -0.81366 -0.456258 0.380653 0.318306 -0.868208 108.739 652.263 289.871 3 'point symmetry operation' ? ? -0.759105 -0.636205 0.13785 -0.619126 0.77102 0.149036 -0.201102 0.027788 -0.979176 559.531 173.349 533.715 4 'point symmetry operation' ? ? -0.09255 0.741802 0.664202 0.979386 0.188108 -0.073617 -0.179551 0.643696 -0.74392 -78.0555 -23.3017 317.281 5 'point symmetry operation' ? ? -0.441156 -0.177746 0.879652 0.314762 0.887276 0.337143 -0.84042 0.425614 -0.33548 183.015 -133.737 433.968 6 'point symmetry operation' ? ? 0.348606 -0.027997 0.936851 0.664624 -0.697403 -0.26815 0.66087 0.716132 -0.224512 -64.1692 322.61 -37.9204 7 'point symmetry operation' ? ? 0.09255 -0.741802 0.664202 -0.979386 -0.188108 -0.073617 0.179551 -0.643696 -0.74392 243.974 555.775 547.498 8 'point symmetry operation' ? ? 0.936851 -0.348606 0.027997 -0.26815 -0.664624 0.697403 -0.224512 -0.66087 -0.716132 94.8531 306.352 645.073 9 'point symmetry operation' ? ? -0.741802 -0.664202 -0.09255 -0.188108 0.073617 0.979386 -0.643696 0.74392 -0.179551 619.322 33.4857 267.57 10 'point symmetry operation' ? ? -0.195049 0.851655 0.486456 0.456258 -0.360259 0.81366 0.868208 0.380653 -0.318306 -35.7984 22.3844 17.1198 11 'point symmetry operation' ? ? -0.636205 -0.13785 0.759105 0.77102 -0.149036 0.619126 0.027788 0.979176 0.201102 251.388 -59.8157 -51.703 12 'point symmetry operation' ? ? 0.441156 0.177746 0.879652 -0.314762 -0.887276 0.337143 0.84042 -0.425614 -0.33548 -123.96 462.474 228.224 13 'point symmetry operation' ? ? 0.195049 -0.851655 0.486456 -0.456258 0.360259 0.81366 -0.868208 -0.380653 -0.318306 289.878 69.9997 636.555 14 'point symmetry operation' ? ? 0.879652 -0.441156 -0.177746 0.337143 0.314762 0.887276 -0.33548 -0.84042 0.425614 183.015 -133.737 433.968 15 'point symmetry operation' ? ? -0.851655 -0.486456 -0.195049 0.360259 -0.81366 0.456258 -0.380653 0.318306 0.868208 627.905 247.271 48.0436 16 'point symmetry operation' ? ? -0.027997 0.936851 0.348606 -0.697403 -0.26815 0.664624 0.716132 -0.224512 0.66087 -64.1692 322.61 -37.9204 17 'point symmetry operation' ? ? -0.664202 0.09255 0.741802 0.073617 -0.979386 0.188108 0.74392 0.179551 0.643696 205.484 425.96 -140.76 18 'point symmetry operation' ? ? 0.636205 0.13785 0.759105 -0.77102 0.149036 0.619126 -0.027787 -0.979176 0.201102 -132.543 248.688 447.751 19 'point symmetry operation' ? ? 0.027997 -0.936851 0.348606 0.697403 0.26815 0.664624 -0.716132 0.224512 0.66087 386.623 -156.304 205.924 20 'point symmetry operation' ? ? 0.759105 -0.636205 -0.13785 0.619126 0.77102 -0.149036 0.201102 0.027788 0.979176 251.388 -59.8157 -51.703 21 'point symmetry operation' ? ? -0.936851 -0.348606 -0.027997 0.26815 -0.664624 -0.697403 0.224512 -0.66087 0.716132 573.418 519.261 178.513 22 'point symmetry operation' ? ? 0.177746 0.879652 0.441156 -0.887276 0.337143 -0.314762 -0.425614 -0.33548 0.84042 -123.96 462.474 228.224 23 'point symmetry operation' ? ? -0.486456 0.195049 0.851655 -0.81366 -0.456258 -0.360259 0.318306 -0.868208 0.380653 108.739 652.263 289.871 24 'point symmetry operation' ? ? 0.664202 -0.09255 0.741802 -0.073617 0.979386 0.188108 -0.74392 -0.179551 0.643696 -78.0555 -23.3017 317.281 25 'point symmetry operation' ? ? -0.177746 -0.879652 0.441156 0.887276 -0.337143 -0.314762 0.425614 0.33548 0.84042 400.509 189.607 -149.278 26 'point symmetry operation' ? ? 0.741802 -0.664202 0.09255 0.188108 0.073617 -0.979386 0.643696 0.74392 0.179551 205.484 425.96 -140.76 27 'point symmetry operation' ? ? -0.879652 -0.441156 0.177746 -0.337143 0.314762 -0.887276 0.33548 -0.84042 -0.425614 531.16 473.575 478.675 28 'point symmetry operation' ? ? 0.13785 0.759105 0.636205 0.149036 0.619126 -0.77102 -0.979176 0.201102 -0.027787 -132.543 248.688 447.751 29 'point symmetry operation' ? ? -0.348606 0.027997 0.936851 -0.664624 0.697403 -0.26815 -0.66087 -0.716132 -0.224512 94.8531 306.352 645.073 30 'point symmetry operation' ? ? 0.486456 -0.195049 0.851655 0.81366 0.456258 -0.360259 -0.318306 0.868208 0.380653 -35.7984 22.3844 17.1198 31 'point symmetry operation' ? ? -0.13785 -0.759105 0.636205 -0.149036 -0.619126 -0.77102 0.979176 -0.201102 -0.027787 312.347 629.697 61.8262 32 'point symmetry operation' ? ? -0.936851 0.348606 0.027997 0.26815 0.664624 0.697403 0.224512 0.66087 -0.716132 386.623 -156.304 205.924 33 'point symmetry operation' ? ? 0.759105 0.636205 0.13785 0.619126 -0.77102 0.149036 0.201102 -0.027787 -0.979176 -132.543 248.688 447.751 34 'point symmetry operation' ? ? 0.177746 -0.879652 -0.441156 -0.887276 -0.337143 0.314762 -0.425614 0.33548 -0.84042 531.16 473.575 478.675 35 'point symmetry operation' ? ? 0.664202 0.09255 -0.741802 -0.073617 -0.979386 -0.188108 -0.74392 0.179551 -0.643696 243.974 555.775 547.498 36 'point symmetry operation' ? ? -0.486456 -0.195049 -0.851655 -0.81366 0.456258 0.360259 0.318306 0.868208 -0.380653 627.905 247.271 48.0436 37 'point symmetry operation' ? ? -0.177746 0.879652 -0.441156 0.887276 0.337143 0.314762 0.425614 -0.33548 -0.84042 183.015 -133.737 433.968 38 'point symmetry operation' ? ? -0.851655 0.486456 0.195049 0.360259 0.81366 -0.456258 -0.380653 -0.318306 -0.868208 289.878 69.9997 636.555 39 'point symmetry operation' ? ? 0.879652 0.441156 0.177746 0.337143 -0.314762 -0.887276 -0.33548 0.84042 -0.425614 -123.96 462.474 228.224 40 'point symmetry operation' ? ? -0.027997 -0.936851 -0.348606 -0.697403 0.26815 -0.664624 0.716132 0.224512 -0.66087 573.418 519.261 178.513 41 'point symmetry operation' ? ? 0.636205 -0.13785 -0.759105 -0.77102 -0.149036 -0.619126 -0.027787 0.979176 -0.201102 312.347 629.697 61.8262 42 'point symmetry operation' ? ? -0.664202 -0.09255 -0.741802 0.073617 0.979386 -0.188108 0.74392 -0.179551 -0.643696 619.322 33.4857 267.57 43 'point symmetry operation' ? ? 0.027997 0.936851 -0.348606 0.697403 -0.26815 -0.664624 -0.716132 -0.224512 -0.66087 94.8531 306.352 645.073 44 'point symmetry operation' ? ? -0.741802 0.664202 0.09255 -0.188108 -0.073617 -0.979386 -0.643696 -0.74392 0.179551 243.974 555.775 547.498 45 'point symmetry operation' ? ? 0.936851 0.348606 -0.027997 -0.26815 0.664624 -0.697403 -0.224512 0.66087 0.716132 -64.1692 322.61 -37.9204 46 'point symmetry operation' ? ? -0.195049 -0.851655 -0.486456 0.456258 0.360259 -0.81366 0.868208 -0.380653 0.318306 627.905 247.271 48.0436 47 'point symmetry operation' ? ? 0.441156 -0.177746 -0.879652 -0.314762 0.887276 -0.337143 0.84042 0.425614 0.33548 400.509 189.607 -149.278 48 'point symmetry operation' ? ? -0.636205 0.13785 -0.759105 0.77102 0.149036 -0.619126 0.027788 -0.979176 -0.201102 559.531 173.349 533.715 49 'point symmetry operation' ? ? 0.195049 0.851655 -0.486456 -0.456258 -0.360259 -0.81366 -0.868208 0.380653 0.318306 108.739 652.263 289.871 50 'point symmetry operation' ? ? -0.759105 0.636205 -0.13785 -0.619126 -0.77102 -0.149036 -0.201102 -0.027787 0.979176 312.347 629.697 61.8262 51 'point symmetry operation' ? ? 0.851655 0.486456 -0.195049 -0.360259 0.81366 0.456258 0.380653 -0.318306 0.868208 -35.7984 22.3844 17.1198 52 'point symmetry operation' ? ? -0.09255 -0.741802 -0.664202 0.979386 -0.188108 0.073617 -0.179551 -0.643696 0.74392 619.322 33.4857 267.57 53 'point symmetry operation' ? ? 0.348606 0.027997 -0.936851 0.664624 0.697403 0.26815 0.66087 -0.716132 0.224512 386.623 -156.304 205.924 54 'point symmetry operation' ? ? -0.441156 0.177746 -0.879652 0.314762 -0.887276 -0.337143 -0.84042 -0.425614 0.33548 531.16 473.575 478.675 55 'point symmetry operation' ? ? 0.09255 0.741802 -0.664202 -0.979386 0.188108 0.073617 0.179551 0.643696 0.74392 205.484 425.96 -140.76 56 'point symmetry operation' ? ? -0.879652 0.441156 -0.177746 -0.337143 -0.314762 0.887276 0.33548 0.84042 0.425614 400.509 189.607 -149.278 57 'point symmetry operation' ? ? 0.741802 0.664202 -0.09255 0.188108 -0.073617 0.979386 0.643696 -0.74392 -0.179551 -78.0555 -23.3017 317.281 58 'point symmetry operation' ? ? 0.13785 -0.759105 -0.636205 0.149036 -0.619126 0.77102 -0.979176 -0.201102 0.027788 559.531 173.349 533.715 59 'point symmetry operation' ? ? 0.486456 0.195049 -0.851655 0.81366 -0.456258 0.360259 -0.318306 -0.868208 -0.380653 289.878 69.9997 636.555 60 'point symmetry operation' ? ? -0.348606 -0.027997 -0.936851 -0.664624 -0.697403 0.26815 -0.66087 0.716132 0.224512 573.418 519.261 178.513 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 258 n n C1 O2 PLM doub 259 n n C1 C2 PLM sing 260 n n O1 H PLM sing 261 n n C2 C3 PLM sing 262 n n C2 H21 PLM sing 263 n n C2 H22 PLM sing 264 n n C3 C4 PLM sing 265 n n C3 H31 PLM sing 266 n n C3 H32 PLM sing 267 n n C4 C5 PLM sing 268 n n C4 H41 PLM sing 269 n n C4 H42 PLM sing 270 n n C5 C6 PLM sing 271 n n C5 H51 PLM sing 272 n n C5 H52 PLM sing 273 n n C6 C7 PLM sing 274 n n C6 H61 PLM sing 275 n n C6 H62 PLM sing 276 n n C7 C8 PLM sing 277 n n C7 H71 PLM sing 278 n n C7 H72 PLM sing 279 n n C8 C9 PLM sing 280 n n C8 H81 PLM sing 281 n n C8 H82 PLM sing 282 n n C9 CA PLM sing 283 n n C9 H91 PLM sing 284 n n C9 H92 PLM sing 285 n n CA CB PLM sing 286 n n CA HA1 PLM sing 287 n n CA HA2 PLM sing 288 n n CB CC PLM sing 289 n n CB HB1 PLM sing 290 n n CB HB2 PLM sing 291 n n CC CD PLM sing 292 n n CC HC1 PLM sing 293 n n CC HC2 PLM sing 294 n n CD CE PLM sing 295 n n CD HD1 PLM sing 296 n n CD HD2 PLM sing 297 n n CE CF PLM sing 298 n n CE HE1 PLM sing 299 n n CE HE2 PLM sing 300 n n CF CG PLM sing 301 n n CF HF1 PLM sing 302 n n CF HF2 PLM sing 303 n n CG HG1 PLM sing 304 n n CG HG2 PLM sing 305 n n CG HG3 PLM sing 306 n n # _atom_sites.entry_id 6RJF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id PLM _pdbx_nonpoly_scheme.pdb_strand_id 1 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 0 _pdbx_nonpoly_scheme.pdb_mon_id PLM _pdbx_nonpoly_scheme.auth_mon_id PLM _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . E 5 375.649 210.703 240.286 1 15 ? C1 PLM 301 1 1 HETATM 2 O O1 PLM . . . E 5 375.573 211.885 240.632 1 15 ? O1 PLM 301 1 1 HETATM 3 O O2 PLM . . . E 5 376.522 210.313 239.495 1 15 ? O2 PLM 301 1 1 HETATM 4 C C2 PLM . . . E 5 374.65 209.688 240.848 1 15 ? C2 PLM 301 1 1 HETATM 5 C C3 PLM . . . E 5 374.873 209.358 242.315 1 15 ? C3 PLM 301 1 1 HETATM 6 C C4 PLM . . . E 5 374.045 208.146 242.703 1 15 ? C4 PLM 301 1 1 HETATM 7 C C5 PLM . . . E 5 374.236 207.951 244.186 1 15 ? C5 PLM 301 1 1 HETATM 8 C C6 PLM . . . E 5 373.73 206.618 244.665 1 15 ? C6 PLM 301 1 1 HETATM 9 C C7 PLM . . . E 5 373.915 206.547 246.173 1 15 ? C7 PLM 301 1 1 HETATM 10 C C8 PLM . . . E 5 373.644 205.138 246.653 1 15 ? C8 PLM 301 1 1 HETATM 11 C C9 PLM . . . E 5 373.633 205.023 248.17 1 15 ? C9 PLM 301 1 1 HETATM 12 C CA PLM . . . E 5 373.681 203.533 248.463 1 15 ? CA PLM 301 1 1 HETATM 13 C CB PLM . . . E 5 373.188 203.161 249.845 1 15 ? CB PLM 301 1 1 HETATM 14 C CC PLM . . . E 5 373.242 201.649 249.884 1 15 ? CC PLM 301 1 1 HETATM 15 C CD PLM . . . E 5 372.507 201.08 251.074 1 15 ? CD PLM 301 1 1 HETATM 16 C CE PLM . . . E 5 372.884 199.611 251.178 1 15 ? CE PLM 301 1 1 HETATM 17 C CF PLM . . . E 5 372.349 198.954 252.433 1 15 ? CF PLM 301 1 1 HETATM 18 C CG PLM . . . E 5 372.858 197.509 252.534 1 15 ? CG PLM 301 1 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 18 #