data_6RKY
#
_model_server_result.job_id            hGfEuGGyLPUdmno9eBQZWA 
_model_server_result.datetime_utc      '2025-01-18 00:31:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6rky 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":403}' 
#
_entry.id    6RKY 
#
_exptl.entry_id    6RKY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.19 
_cell.angle_gamma         90 
_cell.entry_id            6RKY 
_cell.length_a            90.766 
_cell.length_b            201.92 
_cell.length_c            90.637 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6RKY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,I,J,K,L,M,N,S,U 1 1 
B,D,G,H,O,P,Q,R,T,V 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 175 A SER 161 1_555 F P01 ZK8 . A ZK8 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.628 ? 
covale ? covale2 B OG SER 175 B SER 161 1_555 H P01 ZK8 . B ZK8 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.626 ? 
covale ? covale3 C OG SER 175 C SER 161 1_555 N P01 ZK8 . C ZK8 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.618 ? 
covale ? covale4 D OG SER 175 D SER 161 1_555 R P01 ZK8 . D ZK8 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.614 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 250 n n 
C1 C2 PEG sing 251 n n 
C1 H11 PEG sing 252 n n 
C1 H12 PEG sing 253 n n 
O1 HO1 PEG sing 254 n n 
C2 O2 PEG sing 255 n n 
C2 H21 PEG sing 256 n n 
C2 H22 PEG sing 257 n n 
O2 C3 PEG sing 258 n n 
C3 C4 PEG sing 259 n n 
C3 H31 PEG sing 260 n n 
C3 H32 PEG sing 261 n n 
C4 O4 PEG sing 262 n n 
C4 H41 PEG sing 263 n n 
C4 H42 PEG sing 264 n n 
O4 HO4 PEG sing 265 n n 
#
_atom_sites.entry_id                     6RKY 
_atom_sites.fract_transf_matrix[1][1]    0.011017 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004494 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004952 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011916 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GOL A 1 401 401 GOL GOL . 
F 3 ZK8 A 1 402 161 ZK8 140 . 
G 2 GOL B 1 401 401 GOL GOL . 
H 3 ZK8 B 1 402 161 ZK8 140 . 
I 2 GOL C 1 401 401 GOL GOL . 
J 2 GOL C 1 402 402 GOL GOL . 
K 4 PEG C 1 403 501 PEG PEG . 
L 4 PEG C 1 404 502 PEG PEG . 
M 4 PEG C 1 405 503 PEG PEG . 
N 3 ZK8 C 1 406 161 ZK8 140 . 
O 2 GOL D 1 401 401 GOL GOL . 
P 2 GOL D 1 402 402 GOL GOL . 
Q 4 PEG D 1 403 501 PEG PEG . 
R 3 ZK8 D 1 404 161 ZK8 140 . 
S 5 HOH A 1 501 14 HOH HOH . 
S 5 HOH A 2 502 4 HOH HOH . 
S 5 HOH A 3 503 5 HOH HOH . 
S 5 HOH A 4 504 68 HOH HOH . 
S 5 HOH A 5 505 1 HOH HOH . 
S 5 HOH A 6 506 6 HOH HOH . 
S 5 HOH A 7 507 69 HOH HOH . 
S 5 HOH A 8 508 15 HOH HOH . 
S 5 HOH A 9 509 16 HOH HOH . 
S 5 HOH A 10 510 58 HOH HOH . 
S 5 HOH A 11 511 67 HOH HOH . 
S 5 HOH A 12 512 9 HOH HOH . 
S 5 HOH A 13 513 11 HOH HOH . 
S 5 HOH A 14 514 12 HOH HOH . 
S 5 HOH A 15 515 13 HOH HOH . 
S 5 HOH A 16 516 10 HOH HOH . 
T 5 HOH B 1 501 29 HOH HOH . 
T 5 HOH B 2 502 23 HOH HOH . 
T 5 HOH B 3 503 70 HOH HOH . 
T 5 HOH B 4 504 27 HOH HOH . 
T 5 HOH B 5 505 2 HOH HOH . 
T 5 HOH B 6 506 25 HOH HOH . 
T 5 HOH B 7 507 24 HOH HOH . 
T 5 HOH B 8 508 28 HOH HOH . 
T 5 HOH B 9 509 7 HOH HOH . 
T 5 HOH B 10 510 20 HOH HOH . 
T 5 HOH B 11 511 21 HOH HOH . 
T 5 HOH B 12 512 65 HOH HOH . 
T 5 HOH B 13 513 26 HOH HOH . 
T 5 HOH B 14 514 19 HOH HOH . 
U 5 HOH C 1 501 61 HOH HOH . 
U 5 HOH C 2 502 39 HOH HOH . 
U 5 HOH C 3 503 34 HOH HOH . 
U 5 HOH C 4 504 32 HOH HOH . 
U 5 HOH C 5 505 59 HOH HOH . 
U 5 HOH C 6 506 63 HOH HOH . 
U 5 HOH C 7 507 18 HOH HOH . 
U 5 HOH C 8 508 31 HOH HOH . 
U 5 HOH C 9 509 8 HOH HOH . 
U 5 HOH C 10 510 60 HOH HOH . 
U 5 HOH C 11 511 40 HOH HOH . 
U 5 HOH C 12 512 17 HOH HOH . 
U 5 HOH C 13 513 3 HOH HOH . 
U 5 HOH C 14 514 33 HOH HOH . 
U 5 HOH C 15 515 38 HOH HOH . 
U 5 HOH C 16 516 36 HOH HOH . 
U 5 HOH C 17 517 35 HOH HOH . 
U 5 HOH C 18 518 71 HOH HOH . 
U 5 HOH C 19 519 37 HOH HOH . 
V 5 HOH D 1 501 53 HOH HOH . 
V 5 HOH D 2 502 51 HOH HOH . 
V 5 HOH D 3 503 30 HOH HOH . 
V 5 HOH D 4 504 72 HOH HOH . 
V 5 HOH D 5 505 22 HOH HOH . 
V 5 HOH D 6 506 49 HOH HOH . 
V 5 HOH D 7 507 64 HOH HOH . 
V 5 HOH D 8 508 57 HOH HOH . 
V 5 HOH D 9 509 62 HOH HOH . 
V 5 HOH D 10 510 44 HOH HOH . 
V 5 HOH D 11 511 54 HOH HOH . 
V 5 HOH D 12 512 47 HOH HOH . 
V 5 HOH D 13 513 45 HOH HOH . 
V 5 HOH D 14 514 55 HOH HOH . 
V 5 HOH D 15 515 56 HOH HOH . 
V 5 HOH D 16 516 43 HOH HOH . 
V 5 HOH D 17 517 48 HOH HOH . 
V 5 HOH D 18 518 50 HOH HOH . 
V 5 HOH D 19 519 66 HOH HOH . 
V 5 HOH D 20 520 41 HOH HOH . 
V 5 HOH D 21 521 46 HOH HOH . 
V 5 HOH D 22 522 52 HOH HOH . 
V 5 HOH D 23 523 42 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . K 4 -4.889 13.632 32.597 1 73.04 ? C1 PEG 403 C 1 
HETATM 2 O O1 PEG . . . K 4 -5.309 12.305 32.86 1 69.14 ? O1 PEG 403 C 1 
HETATM 3 C C2 PEG . . . K 4 -4.891 13.953 31.13 1 76.52 ? C2 PEG 403 C 1 
HETATM 4 O O2 PEG . . . K 4 -5.026 15.36 30.945 1 81.41 ? O2 PEG 403 C 1 
HETATM 5 C C3 PEG . . . K 4 -6.376 15.821 30.987 1 83.44 ? C3 PEG 403 C 1 
HETATM 6 C C4 PEG . . . K 4 -6.482 17.042 31.859 1 81.78 ? C4 PEG 403 C 1 
HETATM 7 O O4 PEG . . . K 4 -7.544 16.96 32.79 1 77.32 ? O4 PEG 403 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           7 
#